data_7D0E # _model_server_result.job_id FAhYQC2XishsoLexkfDoZA _model_server_result.datetime_utc '2024-11-05 00:58:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7d0e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1602}' # _entry.id 7D0E # _exptl.entry_id 7D0E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7D0E _cell.length_a 51.438 _cell.length_b 51.438 _cell.length_c 86.151 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7D0E _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ASP 3 B ASP 103 1_555 B N SEP 4 B SEP 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 B C SEP 4 B SEP 104 1_555 B N ASP 5 B ASP 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 285 n n C1 C2 PEG sing 286 n n C1 H11 PEG sing 287 n n C1 H12 PEG sing 288 n n O1 HO1 PEG sing 289 n n C2 O2 PEG sing 290 n n C2 H21 PEG sing 291 n n C2 H22 PEG sing 292 n n O2 C3 PEG sing 293 n n C3 C4 PEG sing 294 n n C3 H31 PEG sing 295 n n C3 H32 PEG sing 296 n n C4 O4 PEG sing 297 n n C4 H41 PEG sing 298 n n C4 H42 PEG sing 299 n n O4 HO4 PEG sing 300 n n # _atom_sites.entry_id 7D0E _atom_sites.fract_transf_matrix[1][1] 0.019441 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019441 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011608 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GO9 A 1 1601 1601 GO9 PAE . D 4 PEG A 1 1602 1701 PEG PEG . E 5 HOH A 1 1701 52 HOH HOH . E 5 HOH A 2 1702 85 HOH HOH . E 5 HOH A 3 1703 24 HOH HOH . E 5 HOH A 4 1704 86 HOH HOH . E 5 HOH A 5 1705 78 HOH HOH . E 5 HOH A 6 1706 20 HOH HOH . E 5 HOH A 7 1707 2 HOH HOH . E 5 HOH A 8 1708 25 HOH HOH . E 5 HOH A 9 1709 26 HOH HOH . E 5 HOH A 10 1710 90 HOH HOH . E 5 HOH A 11 1711 10 HOH HOH . E 5 HOH A 12 1712 37 HOH HOH . E 5 HOH A 13 1713 46 HOH HOH . E 5 HOH A 14 1714 3 HOH HOH . E 5 HOH A 15 1715 28 HOH HOH . E 5 HOH A 16 1716 6 HOH HOH . E 5 HOH A 17 1717 17 HOH HOH . E 5 HOH A 18 1718 27 HOH HOH . E 5 HOH A 19 1719 9 HOH HOH . E 5 HOH A 20 1720 82 HOH HOH . E 5 HOH A 21 1721 22 HOH HOH . E 5 HOH A 22 1722 15 HOH HOH . E 5 HOH A 23 1723 65 HOH HOH . E 5 HOH A 24 1724 7 HOH HOH . E 5 HOH A 25 1725 72 HOH HOH . E 5 HOH A 26 1726 45 HOH HOH . E 5 HOH A 27 1727 33 HOH HOH . E 5 HOH A 28 1728 11 HOH HOH . E 5 HOH A 29 1729 38 HOH HOH . E 5 HOH A 30 1730 41 HOH HOH . E 5 HOH A 31 1731 79 HOH HOH . E 5 HOH A 32 1732 1 HOH HOH . E 5 HOH A 33 1733 48 HOH HOH . E 5 HOH A 34 1734 23 HOH HOH . E 5 HOH A 35 1735 40 HOH HOH . E 5 HOH A 36 1736 4 HOH HOH . E 5 HOH A 37 1737 16 HOH HOH . E 5 HOH A 38 1738 36 HOH HOH . E 5 HOH A 39 1739 75 HOH HOH . E 5 HOH A 40 1740 57 HOH HOH . E 5 HOH A 41 1741 31 HOH HOH . E 5 HOH A 42 1742 21 HOH HOH . E 5 HOH A 43 1743 77 HOH HOH . E 5 HOH A 44 1744 47 HOH HOH . E 5 HOH A 45 1745 44 HOH HOH . E 5 HOH A 46 1746 63 HOH HOH . E 5 HOH A 47 1747 12 HOH HOH . E 5 HOH A 48 1748 95 HOH HOH . E 5 HOH A 49 1749 76 HOH HOH . E 5 HOH A 50 1750 93 HOH HOH . E 5 HOH A 51 1751 50 HOH HOH . E 5 HOH A 52 1752 14 HOH HOH . E 5 HOH A 53 1753 29 HOH HOH . E 5 HOH A 54 1754 83 HOH HOH . E 5 HOH A 55 1755 8 HOH HOH . E 5 HOH A 56 1756 5 HOH HOH . E 5 HOH A 57 1757 53 HOH HOH . E 5 HOH A 58 1758 58 HOH HOH . E 5 HOH A 59 1759 39 HOH HOH . E 5 HOH A 60 1760 74 HOH HOH . E 5 HOH A 61 1761 67 HOH HOH . E 5 HOH A 62 1762 71 HOH HOH . E 5 HOH A 63 1763 51 HOH HOH . E 5 HOH A 64 1764 66 HOH HOH . E 5 HOH A 65 1765 13 HOH HOH . E 5 HOH A 66 1766 59 HOH HOH . E 5 HOH A 67 1767 35 HOH HOH . E 5 HOH A 68 1768 34 HOH HOH . E 5 HOH A 69 1769 70 HOH HOH . E 5 HOH A 70 1770 91 HOH HOH . E 5 HOH A 71 1771 64 HOH HOH . E 5 HOH A 72 1772 30 HOH HOH . E 5 HOH A 73 1773 68 HOH HOH . E 5 HOH A 74 1774 81 HOH HOH . E 5 HOH A 75 1775 89 HOH HOH . E 5 HOH A 76 1776 80 HOH HOH . E 5 HOH A 77 1777 55 HOH HOH . E 5 HOH A 78 1778 19 HOH HOH . E 5 HOH A 79 1779 62 HOH HOH . E 5 HOH A 80 1780 54 HOH HOH . E 5 HOH A 81 1781 73 HOH HOH . E 5 HOH A 82 1782 92 HOH HOH . E 5 HOH A 83 1783 49 HOH HOH . E 5 HOH A 84 1784 60 HOH HOH . E 5 HOH A 85 1785 42 HOH HOH . E 5 HOH A 86 1786 84 HOH HOH . E 5 HOH A 87 1787 87 HOH HOH . F 5 HOH B 1 201 56 HOH HOH . F 5 HOH B 2 202 18 HOH HOH . F 5 HOH B 3 203 88 HOH HOH . F 5 HOH B 4 204 94 HOH HOH . F 5 HOH B 5 205 61 HOH HOH . F 5 HOH B 6 206 32 HOH HOH . F 5 HOH B 7 207 43 HOH HOH . F 5 HOH B 8 208 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 4 -19.957 -21.847 2.095 1 43.12 ? C1 PEG 1602 A 1 HETATM 2 O O1 PEG . . . D 4 -20.611 -21.131 1.071 1 41.36 ? O1 PEG 1602 A 1 HETATM 3 C C2 PEG . . . D 4 -20.663 -21.706 3.453 1 48.34 ? C2 PEG 1602 A 1 HETATM 4 O O2 PEG . . . D 4 -19.871 -20.998 4.381 1 50.24 ? O2 PEG 1602 A 1 HETATM 5 C C3 PEG . . . D 4 -19.881 -21.492 5.693 1 56.28 ? C3 PEG 1602 A 1 HETATM 6 C C4 PEG . . . D 4 -19.128 -20.476 6.542 1 58.71 ? C4 PEG 1602 A 1 HETATM 7 O O4 PEG . . . D 4 -19.117 -20.926 7.86 1 63.25 ? O4 PEG 1602 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #