data_7D1Y # _model_server_result.job_id fKCA878r1GXRLVnxpIcfMA _model_server_result.datetime_utc '2024-11-15 14:56:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7d1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7D1Y # _exptl.entry_id 7D1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7D1Y _cell.length_a 55.66 _cell.length_b 71.146 _cell.length_c 80.676 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7D1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 72 A CYS 96 1_555 A SG CYS 85 A CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf2 A SG CYS 96 A CYS 120 1_555 A SG CYS 194 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc1 A NE2 HIS 104 A HIS 128 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc2 A OD2 ASP 120 A ASP 144 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc3 A OD1 ASP 120 A ASP 144 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc4 A OE2 GLU 160 A GLU 184 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc5 A OD2 ASP 214 A ASP 238 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc6 A NE2 HIS 298 A HIS 322 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? metalc ? metalc7 B CO CO . A CO 401 1_555 D O HOH . A HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc8 C CO CO . A CO 402 1_555 D O HOH . A HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7D1Y _atom_sites.fract_transf_matrix[1][1] 0.017966 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014056 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 401 401 CO CO . C 2 CO A 1 402 402 CO CO . D 3 HOH A 1 501 22 HOH HOH . D 3 HOH A 2 502 62 HOH HOH . D 3 HOH A 3 503 170 HOH HOH . D 3 HOH A 4 504 84 HOH HOH . D 3 HOH A 5 505 176 HOH HOH . D 3 HOH A 6 506 49 HOH HOH . D 3 HOH A 7 507 101 HOH HOH . D 3 HOH A 8 508 70 HOH HOH . D 3 HOH A 9 509 12 HOH HOH . D 3 HOH A 10 510 143 HOH HOH . D 3 HOH A 11 511 153 HOH HOH . D 3 HOH A 12 512 80 HOH HOH . D 3 HOH A 13 513 25 HOH HOH . D 3 HOH A 14 514 43 HOH HOH . D 3 HOH A 15 515 74 HOH HOH . D 3 HOH A 16 516 56 HOH HOH . D 3 HOH A 17 517 78 HOH HOH . D 3 HOH A 18 518 137 HOH HOH . D 3 HOH A 19 519 94 HOH HOH . D 3 HOH A 20 520 16 HOH HOH . D 3 HOH A 21 521 151 HOH HOH . D 3 HOH A 22 522 14 HOH HOH . D 3 HOH A 23 523 8 HOH HOH . D 3 HOH A 24 524 26 HOH HOH . D 3 HOH A 25 525 180 HOH HOH . D 3 HOH A 26 526 7 HOH HOH . D 3 HOH A 27 527 96 HOH HOH . D 3 HOH A 28 528 103 HOH HOH . D 3 HOH A 29 529 44 HOH HOH . D 3 HOH A 30 530 104 HOH HOH . D 3 HOH A 31 531 123 HOH HOH . D 3 HOH A 32 532 4 HOH HOH . D 3 HOH A 33 533 52 HOH HOH . D 3 HOH A 34 534 10 HOH HOH . D 3 HOH A 35 535 61 HOH HOH . D 3 HOH A 36 536 145 HOH HOH . D 3 HOH A 37 537 6 HOH HOH . D 3 HOH A 38 538 190 HOH HOH . D 3 HOH A 39 539 72 HOH HOH . D 3 HOH A 40 540 20 HOH HOH . D 3 HOH A 41 541 76 HOH HOH . D 3 HOH A 42 542 54 HOH HOH . D 3 HOH A 43 543 75 HOH HOH . D 3 HOH A 44 544 89 HOH HOH . D 3 HOH A 45 545 119 HOH HOH . D 3 HOH A 46 546 106 HOH HOH . D 3 HOH A 47 547 29 HOH HOH . D 3 HOH A 48 548 41 HOH HOH . D 3 HOH A 49 549 51 HOH HOH . D 3 HOH A 50 550 134 HOH HOH . D 3 HOH A 51 551 127 HOH HOH . D 3 HOH A 52 552 38 HOH HOH . D 3 HOH A 53 553 140 HOH HOH . D 3 HOH A 54 554 115 HOH HOH . D 3 HOH A 55 555 77 HOH HOH . D 3 HOH A 56 556 90 HOH HOH . D 3 HOH A 57 557 99 HOH HOH . D 3 HOH A 58 558 15 HOH HOH . D 3 HOH A 59 559 79 HOH HOH . D 3 HOH A 60 560 86 HOH HOH . D 3 HOH A 61 561 2 HOH HOH . D 3 HOH A 62 562 95 HOH HOH . D 3 HOH A 63 563 174 HOH HOH . D 3 HOH A 64 564 167 HOH HOH . D 3 HOH A 65 565 18 HOH HOH . D 3 HOH A 66 566 17 HOH HOH . D 3 HOH A 67 567 24 HOH HOH . D 3 HOH A 68 568 36 HOH HOH . D 3 HOH A 69 569 30 HOH HOH . D 3 HOH A 70 570 136 HOH HOH . D 3 HOH A 71 571 142 HOH HOH . D 3 HOH A 72 572 118 HOH HOH . D 3 HOH A 73 573 31 HOH HOH . D 3 HOH A 74 574 69 HOH HOH . D 3 HOH A 75 575 141 HOH HOH . D 3 HOH A 76 576 48 HOH HOH . D 3 HOH A 77 577 28 HOH HOH . D 3 HOH A 78 578 177 HOH HOH . D 3 HOH A 79 579 83 HOH HOH . D 3 HOH A 80 580 128 HOH HOH . D 3 HOH A 81 581 35 HOH HOH . D 3 HOH A 82 582 131 HOH HOH . D 3 HOH A 83 583 45 HOH HOH . D 3 HOH A 84 584 163 HOH HOH . D 3 HOH A 85 585 19 HOH HOH . D 3 HOH A 86 586 183 HOH HOH . D 3 HOH A 87 587 189 HOH HOH . D 3 HOH A 88 588 59 HOH HOH . D 3 HOH A 89 589 71 HOH HOH . D 3 HOH A 90 590 42 HOH HOH . D 3 HOH A 91 591 107 HOH HOH . D 3 HOH A 92 592 63 HOH HOH . D 3 HOH A 93 593 13 HOH HOH . D 3 HOH A 94 594 55 HOH HOH . D 3 HOH A 95 595 192 HOH HOH . D 3 HOH A 96 596 5 HOH HOH . D 3 HOH A 97 597 85 HOH HOH . D 3 HOH A 98 598 97 HOH HOH . D 3 HOH A 99 599 58 HOH HOH . D 3 HOH A 100 600 93 HOH HOH . D 3 HOH A 101 601 100 HOH HOH . D 3 HOH A 102 602 3 HOH HOH . D 3 HOH A 103 603 139 HOH HOH . D 3 HOH A 104 604 21 HOH HOH . D 3 HOH A 105 605 116 HOH HOH . D 3 HOH A 106 606 185 HOH HOH . D 3 HOH A 107 607 111 HOH HOH . D 3 HOH A 108 608 105 HOH HOH . D 3 HOH A 109 609 148 HOH HOH . D 3 HOH A 110 610 65 HOH HOH . D 3 HOH A 111 611 50 HOH HOH . D 3 HOH A 112 612 9 HOH HOH . D 3 HOH A 113 613 34 HOH HOH . D 3 HOH A 114 614 168 HOH HOH . D 3 HOH A 115 615 87 HOH HOH . D 3 HOH A 116 616 164 HOH HOH . D 3 HOH A 117 617 92 HOH HOH . D 3 HOH A 118 618 11 HOH HOH . D 3 HOH A 119 619 46 HOH HOH . D 3 HOH A 120 620 172 HOH HOH . D 3 HOH A 121 621 64 HOH HOH . D 3 HOH A 122 622 113 HOH HOH . D 3 HOH A 123 623 57 HOH HOH . D 3 HOH A 124 624 135 HOH HOH . D 3 HOH A 125 625 144 HOH HOH . D 3 HOH A 126 626 53 HOH HOH . D 3 HOH A 127 627 73 HOH HOH . D 3 HOH A 128 628 37 HOH HOH . D 3 HOH A 129 629 186 HOH HOH . D 3 HOH A 130 630 40 HOH HOH . D 3 HOH A 131 631 60 HOH HOH . D 3 HOH A 132 632 67 HOH HOH . D 3 HOH A 133 633 68 HOH HOH . D 3 HOH A 134 634 191 HOH HOH . D 3 HOH A 135 635 110 HOH HOH . D 3 HOH A 136 636 33 HOH HOH . D 3 HOH A 137 637 66 HOH HOH . D 3 HOH A 138 638 182 HOH HOH . D 3 HOH A 139 639 1 HOH HOH . D 3 HOH A 140 640 146 HOH HOH . D 3 HOH A 141 641 132 HOH HOH . D 3 HOH A 142 642 109 HOH HOH . D 3 HOH A 143 643 32 HOH HOH . D 3 HOH A 144 644 147 HOH HOH . D 3 HOH A 145 645 27 HOH HOH . D 3 HOH A 146 646 23 HOH HOH . D 3 HOH A 147 647 114 HOH HOH . D 3 HOH A 148 648 178 HOH HOH . D 3 HOH A 149 649 173 HOH HOH . D 3 HOH A 150 650 81 HOH HOH . D 3 HOH A 151 651 171 HOH HOH . D 3 HOH A 152 652 108 HOH HOH . D 3 HOH A 153 653 161 HOH HOH . D 3 HOH A 154 654 117 HOH HOH . D 3 HOH A 155 655 162 HOH HOH . D 3 HOH A 156 656 122 HOH HOH . D 3 HOH A 157 657 102 HOH HOH . D 3 HOH A 158 658 112 HOH HOH . D 3 HOH A 159 659 157 HOH HOH . D 3 HOH A 160 660 165 HOH HOH . D 3 HOH A 161 661 91 HOH HOH . D 3 HOH A 162 662 179 HOH HOH . D 3 HOH A 163 663 133 HOH HOH . D 3 HOH A 164 664 126 HOH HOH . D 3 HOH A 165 665 160 HOH HOH . D 3 HOH A 166 666 188 HOH HOH . D 3 HOH A 167 667 98 HOH HOH . D 3 HOH A 168 668 138 HOH HOH . D 3 HOH A 169 669 187 HOH HOH . D 3 HOH A 170 670 121 HOH HOH . D 3 HOH A 171 671 125 HOH HOH . D 3 HOH A 172 672 124 HOH HOH . D 3 HOH A 173 673 184 HOH HOH . D 3 HOH A 174 674 120 HOH HOH . D 3 HOH A 175 675 159 HOH HOH . D 3 HOH A 176 676 175 HOH HOH . D 3 HOH A 177 677 129 HOH HOH . D 3 HOH A 178 678 149 HOH HOH . D 3 HOH A 179 679 158 HOH HOH . D 3 HOH A 180 680 88 HOH HOH . D 3 HOH A 181 681 166 HOH HOH . D 3 HOH A 182 682 152 HOH HOH . D 3 HOH A 183 683 39 HOH HOH . D 3 HOH A 184 684 181 HOH HOH . D 3 HOH A 185 685 154 HOH HOH . D 3 HOH A 186 686 150 HOH HOH . D 3 HOH A 187 687 156 HOH HOH . D 3 HOH A 188 688 47 HOH HOH . D 3 HOH A 189 689 82 HOH HOH . D 3 HOH A 190 690 155 HOH HOH . D 3 HOH A 191 691 130 HOH HOH . D 3 HOH A 192 692 169 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -13.973 _atom_site.Cartn_y 17.983 _atom_site.Cartn_z -4.296 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #