data_7D2C
#
_model_server_result.job_id            hhqtsUlR_KHpZWZ021QHtA 
_model_server_result.datetime_utc      '2024-11-12 20:29:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7d2c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1402}' 
#
_entry.id    7D2C 
#
_exptl.entry_id    7D2C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7D2C 
_cell.length_a            33.761 
_cell.length_b            41.281 
_cell.length_c            109.683 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7D2C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7D2C 
_atom_sites.fract_transf_matrix[1][1]    0.02962 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024224 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009117 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 1401 1 GOL GOL . 
C 2 GOL A 1 1402 2 GOL GOL . 
D 3 CL A 1 1403 3 CL CL . 
E 3 CL A 1 1404 4 CL CL . 
F 4 HOH A 1 1501 75 HOH HOH . 
F 4 HOH A 2 1502 17 HOH HOH . 
F 4 HOH A 3 1503 61 HOH HOH . 
F 4 HOH A 4 1504 99 HOH HOH . 
F 4 HOH A 5 1505 98 HOH HOH . 
F 4 HOH A 6 1506 28 HOH HOH . 
F 4 HOH A 7 1507 87 HOH HOH . 
F 4 HOH A 8 1508 91 HOH HOH . 
F 4 HOH A 9 1509 43 HOH HOH . 
F 4 HOH A 10 1510 14 HOH HOH . 
F 4 HOH A 11 1511 16 HOH HOH . 
F 4 HOH A 12 1512 64 HOH HOH . 
F 4 HOH A 13 1513 7 HOH HOH . 
F 4 HOH A 14 1514 12 HOH HOH . 
F 4 HOH A 15 1515 21 HOH HOH . 
F 4 HOH A 16 1516 8 HOH HOH . 
F 4 HOH A 17 1517 58 HOH HOH . 
F 4 HOH A 18 1518 67 HOH HOH . 
F 4 HOH A 19 1519 36 HOH HOH . 
F 4 HOH A 20 1520 66 HOH HOH . 
F 4 HOH A 21 1521 109 HOH HOH . 
F 4 HOH A 22 1522 1 HOH HOH . 
F 4 HOH A 23 1523 6 HOH HOH . 
F 4 HOH A 24 1524 15 HOH HOH . 
F 4 HOH A 25 1525 52 HOH HOH . 
F 4 HOH A 26 1526 19 HOH HOH . 
F 4 HOH A 27 1527 2 HOH HOH . 
F 4 HOH A 28 1528 37 HOH HOH . 
F 4 HOH A 29 1529 45 HOH HOH . 
F 4 HOH A 30 1530 97 HOH HOH . 
F 4 HOH A 31 1531 13 HOH HOH . 
F 4 HOH A 32 1532 32 HOH HOH . 
F 4 HOH A 33 1533 70 HOH HOH . 
F 4 HOH A 34 1534 83 HOH HOH . 
F 4 HOH A 35 1535 102 HOH HOH . 
F 4 HOH A 36 1536 68 HOH HOH . 
F 4 HOH A 37 1537 60 HOH HOH . 
F 4 HOH A 38 1538 44 HOH HOH . 
F 4 HOH A 39 1539 34 HOH HOH . 
F 4 HOH A 40 1540 47 HOH HOH . 
F 4 HOH A 41 1541 46 HOH HOH . 
F 4 HOH A 42 1542 49 HOH HOH . 
F 4 HOH A 43 1543 31 HOH HOH . 
F 4 HOH A 44 1544 78 HOH HOH . 
F 4 HOH A 45 1545 11 HOH HOH . 
F 4 HOH A 46 1546 79 HOH HOH . 
F 4 HOH A 47 1547 24 HOH HOH . 
F 4 HOH A 48 1548 76 HOH HOH . 
F 4 HOH A 49 1549 3 HOH HOH . 
F 4 HOH A 50 1550 65 HOH HOH . 
F 4 HOH A 51 1551 55 HOH HOH . 
F 4 HOH A 52 1552 51 HOH HOH . 
F 4 HOH A 53 1553 71 HOH HOH . 
F 4 HOH A 54 1554 10 HOH HOH . 
F 4 HOH A 55 1555 95 HOH HOH . 
F 4 HOH A 56 1556 4 HOH HOH . 
F 4 HOH A 57 1557 90 HOH HOH . 
F 4 HOH A 58 1558 100 HOH HOH . 
F 4 HOH A 59 1559 82 HOH HOH . 
F 4 HOH A 60 1560 56 HOH HOH . 
F 4 HOH A 61 1561 89 HOH HOH . 
F 4 HOH A 62 1562 18 HOH HOH . 
F 4 HOH A 63 1563 69 HOH HOH . 
F 4 HOH A 64 1564 103 HOH HOH . 
F 4 HOH A 65 1565 107 HOH HOH . 
F 4 HOH A 66 1566 72 HOH HOH . 
F 4 HOH A 67 1567 29 HOH HOH . 
F 4 HOH A 68 1568 40 HOH HOH . 
F 4 HOH A 69 1569 62 HOH HOH . 
F 4 HOH A 70 1570 27 HOH HOH . 
F 4 HOH A 71 1571 20 HOH HOH . 
F 4 HOH A 72 1572 42 HOH HOH . 
F 4 HOH A 73 1573 22 HOH HOH . 
F 4 HOH A 74 1574 38 HOH HOH . 
F 4 HOH A 75 1575 35 HOH HOH . 
F 4 HOH A 76 1576 41 HOH HOH . 
F 4 HOH A 77 1577 92 HOH HOH . 
F 4 HOH A 78 1578 59 HOH HOH . 
F 4 HOH A 79 1579 23 HOH HOH . 
F 4 HOH A 80 1580 53 HOH HOH . 
F 4 HOH A 81 1581 9 HOH HOH . 
F 4 HOH A 82 1582 26 HOH HOH . 
F 4 HOH A 83 1583 48 HOH HOH . 
F 4 HOH A 84 1584 57 HOH HOH . 
F 4 HOH A 85 1585 25 HOH HOH . 
F 4 HOH A 86 1586 5 HOH HOH . 
F 4 HOH A 87 1587 50 HOH HOH . 
F 4 HOH A 88 1588 94 HOH HOH . 
F 4 HOH A 89 1589 39 HOH HOH . 
F 4 HOH A 90 1590 33 HOH HOH . 
F 4 HOH A 91 1591 30 HOH HOH . 
F 4 HOH A 92 1592 86 HOH HOH . 
F 4 HOH A 93 1593 54 HOH HOH . 
F 4 HOH A 94 1594 106 HOH HOH . 
F 4 HOH A 95 1595 104 HOH HOH . 
F 4 HOH A 96 1596 73 HOH HOH . 
F 4 HOH A 97 1597 108 HOH HOH . 
F 4 HOH A 98 1598 80 HOH HOH . 
F 4 HOH A 99 1599 74 HOH HOH . 
F 4 HOH A 100 1600 101 HOH HOH . 
F 4 HOH A 101 1601 85 HOH HOH . 
F 4 HOH A 102 1602 81 HOH HOH . 
F 4 HOH A 103 1603 96 HOH HOH . 
F 4 HOH A 104 1604 63 HOH HOH . 
F 4 HOH A 105 1605 93 HOH HOH . 
F 4 HOH A 106 1606 88 HOH HOH . 
F 4 HOH A 107 1607 84 HOH HOH . 
F 4 HOH A 108 1608 77 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 -15.888 22.577 -0.76 1 24.06 ? C1 GOL 1402 A 1 
HETATM 2 O O1 GOL . . . C 2 -15.994 21.169 -0.969 1 20.7 ? O1 GOL 1402 A 1 
HETATM 3 C C2 GOL . . . C 2 -14.479 22.998 -0.393 1 24.58 ? C2 GOL 1402 A 1 
HETATM 4 O O2 GOL . . . C 2 -13.915 22.05 0.51 1 25.8 ? O2 GOL 1402 A 1 
HETATM 5 C C3 GOL . . . C 2 -13.574 23.17 -1.597 1 25.49 ? C3 GOL 1402 A 1 
HETATM 6 O O3 GOL . . . C 2 -12.196 23.008 -1.268 1 25.87 ? O3 GOL 1402 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#