data_7D4L
#
_model_server_result.job_id            SNboTDMkAZk2AcdcGyPk-w 
_model_server_result.datetime_utc      '2024-11-21 13:58:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7d4l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    7D4L 
#
_exptl.entry_id    7D4L 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7D4L 
_cell.length_a            34.293 
_cell.length_b            45.625 
_cell.length_c            98.974 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7D4L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 116 A ASP 116 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc2 A ND1 HIS 149 A HIS 149 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc3 A O ARG 159 A ARG 159 1_555 D MN MN . A MN 203 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc4 D MN MN . A MN 203 1_555 E O HOH . A HOH 317 3_745 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc5 D MN MN . A MN 203 1_555 E O HOH . A HOH 355 3_745 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc6 D MN MN . A MN 203 1_555 E O HOH . A HOH 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     7D4L 
_atom_sites.fract_transf_matrix[1][1]    0.02916 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021918 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010104 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FOL A 1 201 161 FOL FOL . 
C 3 NAP A 1 202 164 NAP NAP . 
D 4 MN A 1 203 1 MN MN . 
E 5 HOH A 1 301 3 HOH HOH . 
E 5 HOH A 2 302 29 HOH HOH . 
E 5 HOH A 3 303 61 HOH HOH . 
E 5 HOH A 4 304 9 HOH HOH . 
E 5 HOH A 5 305 38 HOH HOH . 
E 5 HOH A 6 306 70 HOH HOH . 
E 5 HOH A 7 307 30 HOH HOH . 
E 5 HOH A 8 308 99 HOH HOH . 
E 5 HOH A 9 309 24 HOH HOH . 
E 5 HOH A 10 310 42 HOH HOH . 
E 5 HOH A 11 311 5 HOH HOH . 
E 5 HOH A 12 312 39 HOH HOH . 
E 5 HOH A 13 313 111 HOH HOH . 
E 5 HOH A 14 314 52 HOH HOH . 
E 5 HOH A 15 315 21 HOH HOH . 
E 5 HOH A 16 316 27 HOH HOH . 
E 5 HOH A 17 317 36 HOH HOH . 
E 5 HOH A 18 318 7 HOH HOH . 
E 5 HOH A 19 319 57 HOH HOH . 
E 5 HOH A 20 320 11 HOH HOH . 
E 5 HOH A 21 321 56 HOH HOH . 
E 5 HOH A 22 322 31 HOH HOH . 
E 5 HOH A 23 323 35 HOH HOH . 
E 5 HOH A 24 324 91 HOH HOH . 
E 5 HOH A 25 325 119 HOH HOH . 
E 5 HOH A 26 326 26 HOH HOH . 
E 5 HOH A 27 327 59 HOH HOH . 
E 5 HOH A 28 328 25 HOH HOH . 
E 5 HOH A 29 329 18 HOH HOH . 
E 5 HOH A 30 330 66 HOH HOH . 
E 5 HOH A 31 331 69 HOH HOH . 
E 5 HOH A 32 332 108 HOH HOH . 
E 5 HOH A 33 333 64 HOH HOH . 
E 5 HOH A 34 334 74 HOH HOH . 
E 5 HOH A 35 335 17 HOH HOH . 
E 5 HOH A 36 336 8 HOH HOH . 
E 5 HOH A 37 337 34 HOH HOH . 
E 5 HOH A 38 338 123 HOH HOH . 
E 5 HOH A 39 339 45 HOH HOH . 
E 5 HOH A 40 340 51 HOH HOH . 
E 5 HOH A 41 341 75 HOH HOH . 
E 5 HOH A 42 342 40 HOH HOH . 
E 5 HOH A 43 343 44 HOH HOH . 
E 5 HOH A 44 344 63 HOH HOH . 
E 5 HOH A 45 345 6 HOH HOH . 
E 5 HOH A 46 346 32 HOH HOH . 
E 5 HOH A 47 347 10 HOH HOH . 
E 5 HOH A 48 348 68 HOH HOH . 
E 5 HOH A 49 349 50 HOH HOH . 
E 5 HOH A 50 350 2 HOH HOH . 
E 5 HOH A 51 351 33 HOH HOH . 
E 5 HOH A 52 352 47 HOH HOH . 
E 5 HOH A 53 353 16 HOH HOH . 
E 5 HOH A 54 354 97 HOH HOH . 
E 5 HOH A 55 355 1 HOH HOH . 
E 5 HOH A 56 356 65 HOH HOH . 
E 5 HOH A 57 357 12 HOH HOH . 
E 5 HOH A 58 358 13 HOH HOH . 
E 5 HOH A 59 359 19 HOH HOH . 
E 5 HOH A 60 360 71 HOH HOH . 
E 5 HOH A 61 361 20 HOH HOH . 
E 5 HOH A 62 362 15 HOH HOH . 
E 5 HOH A 63 363 73 HOH HOH . 
E 5 HOH A 64 364 22 HOH HOH . 
E 5 HOH A 65 365 37 HOH HOH . 
E 5 HOH A 66 366 46 HOH HOH . 
E 5 HOH A 67 367 14 HOH HOH . 
E 5 HOH A 68 368 28 HOH HOH . 
E 5 HOH A 69 369 4 HOH HOH . 
E 5 HOH A 70 370 88 HOH HOH . 
E 5 HOH A 71 371 60 HOH HOH . 
E 5 HOH A 72 372 54 HOH HOH . 
E 5 HOH A 73 373 87 HOH HOH . 
E 5 HOH A 74 374 41 HOH HOH . 
E 5 HOH A 75 375 85 HOH HOH . 
E 5 HOH A 76 376 114 HOH HOH . 
E 5 HOH A 77 377 101 HOH HOH . 
E 5 HOH A 78 378 117 HOH HOH . 
E 5 HOH A 79 379 23 HOH HOH . 
E 5 HOH A 80 380 86 HOH HOH . 
E 5 HOH A 81 381 96 HOH HOH . 
E 5 HOH A 82 382 77 HOH HOH . 
E 5 HOH A 83 383 94 HOH HOH . 
E 5 HOH A 84 384 53 HOH HOH . 
E 5 HOH A 85 385 55 HOH HOH . 
E 5 HOH A 86 386 107 HOH HOH . 
E 5 HOH A 87 387 67 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               43.127 
_atom_site.Cartn_y               33.198 
_atom_site.Cartn_z               21.342 
_atom_site.occupancy             0.62 
_atom_site.B_iso_or_equiv        21.45 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           203 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#