data_7D6J # _model_server_result.job_id -cu4AuAjPlS62YR3wn2dIw _model_server_result.datetime_utc '2024-11-04 20:14:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7d6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":601}' # _entry.id 7D6J # _exptl.entry_id 7D6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 424.083 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[3,5-bis(bromanyl)-4-oxidanyl-phenyl]-(2-ethyl-1-benzofuran-3-yl)methanone' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.231 _cell.angle_gamma 90 _cell.entry_id 7D6J _cell.length_a 58.372 _cell.length_b 179.727 _cell.length_c 59.658 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7D6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G,H,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf18 B SG CYS 53 B CYS 53 1_555 B SG CYS 62 B CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf19 B SG CYS 75 B CYS 75 1_555 B SG CYS 91 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf20 B SG CYS 90 B CYS 90 1_555 B SG CYS 101 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf21 B SG CYS 124 B CYS 124 1_555 B SG CYS 169 B CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf22 B SG CYS 168 B CYS 168 1_555 B SG CYS 177 B CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf23 B SG CYS 200 B CYS 200 1_555 B SG CYS 246 B CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf24 B SG CYS 245 B CYS 245 1_555 B SG CYS 253 B CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf25 B SG CYS 265 B CYS 265 1_555 B SG CYS 279 B CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf26 B SG CYS 278 B CYS 278 1_555 B SG CYS 289 B CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf27 B SG CYS 316 B CYS 316 1_555 B SG CYS 361 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf28 B SG CYS 360 B CYS 360 1_555 B SG CYS 369 B CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf29 B SG CYS 392 B CYS 392 1_555 B SG CYS 438 B CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf30 B SG CYS 437 B CYS 437 1_555 B SG CYS 448 B CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf31 B SG CYS 461 B CYS 461 1_555 B SG CYS 477 B CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf32 B SG CYS 476 B CYS 476 1_555 B SG CYS 487 B CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf33 B SG CYS 514 B CYS 514 1_555 B SG CYS 559 B CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf34 B SG CYS 558 B CYS 558 1_555 B SG CYS 567 B CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C17 H12 Br2 O3' _chem_comp.formula_weight 424.083 _chem_comp.id R75 _chem_comp.mon_nstd_flag . _chem_comp.name '[3,5-bis(bromanyl)-4-oxidanyl-phenyl]-(2-ethyl-1-benzofuran-3-yl)methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Benzbromarone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAG CAC R75 sing 275 n n BR2 CAB R75 sing 276 n n CAC CAB R75 doub 277 n y CAC CAD R75 sing 278 n y CAB CAA R75 sing 279 n y BR1 CAD R75 sing 280 n n CAD CAE R75 doub 281 n y CAA CAF R75 doub 282 n y CAE CAF R75 sing 283 n y CAF CAJ R75 sing 284 n n OAK CAJ R75 doub 285 n n CAJ CAL R75 sing 286 n n CAL CAM R75 doub 287 n y CAL CAP R75 sing 288 n y CAQ CAM R75 sing 289 n n CAQ CAR R75 sing 290 n n CAM OAN R75 sing 291 n y CAV CAP R75 doub 292 n y CAV CAU R75 sing 293 n y CAP CAO R75 sing 294 n y OAN CAO R75 sing 295 n y CAU CAT R75 doub 296 n y CAO CAS R75 doub 297 n y CAT CAS R75 sing 298 n y CAA H1 R75 sing 299 n n CAE H2 R75 sing 300 n n CAQ H4 R75 sing 301 n n CAQ H5 R75 sing 302 n n CAR H6 R75 sing 303 n n CAR H7 R75 sing 304 n n CAR H8 R75 sing 305 n n CAS H9 R75 sing 306 n n CAT H10 R75 sing 307 n n CAU H11 R75 sing 308 n n CAV H12 R75 sing 309 n n OAG H13 R75 sing 310 n n # _atom_sites.entry_id 7D6J _atom_sites.fract_transf_matrix[1][1] 0.017132 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004664 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017372 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R75 A 1 601 1 R75 LIG . D 2 R75 A 1 602 3 R75 LIG . E 2 R75 A 1 603 5 R75 LIG . F 2 R75 A 1 604 6 R75 LIG . G 2 R75 B 1 601 2 R75 LIG . H 2 R75 B 1 602 4 R75 LIG . I 2 R75 B 1 603 7 R75 LIG . J 2 R75 B 1 604 8 R75 LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA R75 . . . G 2 36.022 16.825 17.234 0.72 100.21 ? CAA R75 601 B 1 HETATM 2 C CAB R75 . . . G 2 36.179 18.02 17.902 0.72 100.7 ? CAB R75 601 B 1 HETATM 3 C CAC R75 . . . G 2 35.553 19.192 17.484 0.72 99.15 ? CAC R75 601 B 1 HETATM 4 C CAD R75 . . . G 2 34.758 19.098 16.344 0.72 96.37 ? CAD R75 601 B 1 HETATM 5 C CAE R75 . . . G 2 34.588 17.914 15.661 0.72 99.03 ? CAE R75 601 B 1 HETATM 6 C CAF R75 . . . G 2 35.239 16.764 16.089 0.72 100.09 ? CAF R75 601 B 1 HETATM 7 C CAJ R75 . . . G 2 35.067 15.461 15.383 0.72 100.98 ? CAJ R75 601 B 1 HETATM 8 C CAL R75 . . . G 2 34.622 15.401 13.989 0.72 100.41 ? CAL R75 601 B 1 HETATM 9 C CAM R75 . . . G 2 33.766 14.485 13.464 0.72 99.65 ? CAM R75 601 B 1 HETATM 10 C CAO R75 . . . G 2 34.369 15.787 11.784 0.72 102.42 ? CAO R75 601 B 1 HETATM 11 C CAP R75 . . . G 2 35.04 16.251 12.897 0.72 101.78 ? CAP R75 601 B 1 HETATM 12 C CAQ R75 . . . G 2 32.998 13.356 14.053 0.72 98.88 ? CAQ R75 601 B 1 HETATM 13 C CAR R75 . . . G 2 31.733 13.035 13.295 0.72 103.91 ? CAR R75 601 B 1 HETATM 14 C CAS R75 . . . G 2 34.479 16.33 10.519 0.72 105.47 ? CAS R75 601 B 1 HETATM 15 C CAT R75 . . . G 2 35.334 17.406 10.403 0.72 107.16 ? CAT R75 601 B 1 HETATM 16 C CAU R75 . . . G 2 36.029 17.907 11.501 0.72 106.57 ? CAU R75 601 B 1 HETATM 17 C CAV R75 . . . G 2 35.895 17.345 12.749 0.72 102.81 ? CAV R75 601 B 1 HETATM 18 O OAG R75 . . . G 2 35.707 20.354 18.142 0.72 101.26 ? OAG R75 601 B 1 HETATM 19 O OAK R75 . . . G 2 35.285 14.418 16.005 0.72 104.21 ? OAK R75 601 B 1 HETATM 20 O OAN R75 . . . G 2 33.579 14.709 12.122 0.72 102.88 ? OAN R75 601 B 1 HETATM 21 BR BR1 R75 . . . G 2 33.882 20.656 15.729 0.72 82.62 ? BR1 R75 601 B 1 HETATM 22 BR BR2 R75 . . . G 2 37.271 18.081 19.444 0.72 121.56 ? BR2 R75 601 B 1 # _model_server_stats.io_time_ms 121 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #