data_7D73
#
_model_server_result.job_id            VodmYYAiWParfNet6q2oFg 
_model_server_result.datetime_utc      '2024-11-22 21:49:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7d73 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":401}' 
#
_entry.id    7D73 
#
_exptl.entry_id    7D73 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7D73 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7D73 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 N N N 
? 4 O N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 W N N 
? 4 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 I SG CYS 289 J CYS 289 1_555 I SG CYS 306 J CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 K SG CYS 289 L CYS 289 1_555 K SG CYS 306 L CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
covale ? covale1 G O ALA 52 G ALA 52 1_555 S N2 GTP . G GTP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? 
covale ? covale2 J O ALA 52 K ALA 52 1_555 V N2 GTP . K GTP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? 
covale ? covale3 L O ALA 52 H ALA 52 1_555 X N2 GTP . H GTP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7D73 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 3 GDD A 1 501 501 GDD GDD . 
N 4 GTP B 1 501 501 GTP GTP . 
O 4 GTP E 1 401 401 GTP GTP . 
P 3 GDD C 1 501 501 GDD GDD . 
Q 4 GTP D 1 501 501 GTP GTP . 
R 4 GTP F 1 401 401 GTP GTP . 
S 4 GTP G 1 401 401 GTP GTP . 
T 4 GTP I 1 401 401 GTP GTP . 
U 4 GTP J 1 401 401 GTP GTP . 
V 4 GTP K 1 401 401 GTP GTP . 
W 4 GTP L 1 401 401 GTP GTP . 
X 4 GTP H 1 401 401 GTP GTP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . V 4 100.945 80.463 167.715 1 52.4 ? PG GTP 401 K 1 
HETATM 2 O O1G GTP . . . V 4 100.64 81.871 167.384 1 52.4 ? O1G GTP 401 K 1 
HETATM 3 O O2G GTP . . . V 4 101.125 79.578 166.383 1 52.4 ? O2G GTP 401 K 1 
HETATM 4 O O3G GTP . . . V 4 102.212 80.403 168.577 1 52.4 ? O3G GTP 401 K 1 
HETATM 5 O O3B GTP . . . V 4 99.726 79.85 168.554 1 52.4 ? O3B GTP 401 K 1 
HETATM 6 P PB GTP . . . V 4 98.312 80.476 168.955 1 52.4 ? PB GTP 401 K 1 
HETATM 7 O O1B GTP . . . V 4 98.464 81.838 169.497 1 52.4 ? O1B GTP 401 K 1 
HETATM 8 O O2B GTP . . . V 4 97.629 79.524 170.024 1 52.4 ? O2B GTP 401 K 1 
HETATM 9 O O3A GTP . . . V 4 97.376 80.647 167.665 1 52.4 ? O3A GTP 401 K 1 
HETATM 10 P PA GTP . . . V 4 96.941 79.597 166.53 1 52.4 ? PA GTP 401 K 1 
HETATM 11 O O1A GTP . . . V 4 96.474 80.311 165.33 1 52.4 ? O1A GTP 401 K 1 
HETATM 12 O O2A GTP . . . V 4 98.212 78.695 166.13 1 52.4 ? O2A GTP 401 K 1 
HETATM 13 O O5' GTP . . . V 4 95.737 78.702 167.104 1 52.4 ? O5' GTP 401 K 1 
HETATM 14 C C5' GTP . . . V 4 94.472 79.357 167.161 1 52.4 ? C5' GTP 401 K 1 
HETATM 15 C C4' GTP . . . V 4 93.893 79.392 168.573 1 52.4 ? C4' GTP 401 K 1 
HETATM 16 O O4' GTP . . . V 4 94.346 78.257 169.323 1 52.4 ? O4' GTP 401 K 1 
HETATM 17 C C3' GTP . . . V 4 94.451 80.597 169.346 1 52.4 ? C3' GTP 401 K 1 
HETATM 18 O O3' GTP . . . V 4 93.526 81.676 169.376 1 52.4 ? O3' GTP 401 K 1 
HETATM 19 C C2' GTP . . . V 4 94.619 80.057 170.773 1 52.4 ? C2' GTP 401 K 1 
HETATM 20 O O2' GTP . . . V 4 93.798 80.831 171.644 1 52.4 ? O2' GTP 401 K 1 
HETATM 21 C C1' GTP . . . V 4 94.114 78.626 170.657 1 52.4 ? C1' GTP 401 K 1 
HETATM 22 N N9 GTP . . . V 4 94.851 77.769 171.576 1 52.4 ? N9 GTP 401 K 1 
HETATM 23 C C8 GTP . . . V 4 96.013 77.147 171.257 1 52.4 ? C8 GTP 401 K 1 
HETATM 24 N N7 GTP . . . V 4 96.434 76.449 172.318 1 52.4 ? N7 GTP 401 K 1 
HETATM 25 C C5 GTP . . . V 4 95.546 76.615 173.318 1 52.4 ? C5 GTP 401 K 1 
HETATM 26 C C6 GTP . . . V 4 95.466 76.126 174.632 1 52.4 ? C6 GTP 401 K 1 
HETATM 27 O O6 GTP . . . V 4 96.338 75.396 175.056 1 52.4 ? O6 GTP 401 K 1 
HETATM 28 N N1 GTP . . . V 4 94.434 76.456 175.429 1 52.4 ? N1 GTP 401 K 1 
HETATM 29 C C2 GTP . . . V 4 93.502 77.278 174.879 1 52.4 ? C2 GTP 401 K 1 
HETATM 30 N N2 GTP . . . V 4 92.498 77.604 175.684 1 52.4 ? N2 GTP 401 K 1 
HETATM 31 N N3 GTP . . . V 4 93.509 77.773 173.655 1 52.4 ? N3 GTP 401 K 1 
HETATM 32 C C4 GTP . . . V 4 94.534 77.449 172.858 1 52.4 ? C4 GTP 401 K 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           257 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           32 
#