data_7DAL # _model_server_result.job_id j8IA6ZYXYvOx8WNqygskIg _model_server_result.datetime_utc '2025-02-27 03:07:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dal # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7DAL # _exptl.entry_id 7DAL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DAL _cell.length_a 66.551 _cell.length_b 66.803 _cell.length_c 81.917 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DAL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 7DAL _atom_sites.fract_transf_matrix[1][1] 0.015026 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014969 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012207 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACO A 1 301 301 ACO ACO . D 3 SRO A 1 302 401 SRO SRO . E 2 ACO B 1 301 301 ACO ACO . F 3 SRO B 1 302 401 SRO SRO . G 4 HOH A 1 401 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . C 2 12.484 1.539 -27.357 1 90.73 ? N1A ACO 301 A 1 HETATM 2 C C2A ACO . . . C 2 11.917 2.689 -27.031 1 86.04 ? C2A ACO 301 A 1 HETATM 3 N N3A ACO . . . C 2 10.851 3.164 -27.641 1 79.56 ? N3A ACO 301 A 1 HETATM 4 C C4A ACO . . . C 2 10.299 2.505 -28.634 1 78.37 ? C4A ACO 301 A 1 HETATM 5 C C5A ACO . . . C 2 10.856 1.252 -29.053 1 77.96 ? C5A ACO 301 A 1 HETATM 6 C C6A ACO . . . C 2 12.01 0.788 -28.338 1 84.18 ? C6A ACO 301 A 1 HETATM 7 N N6A ACO . . . C 2 12.565 -0.369 -28.692 1 83.12 ? N6A ACO 301 A 1 HETATM 8 N N7A ACO . . . C 2 10.142 0.794 -30.061 1 77.14 ? N7A ACO 301 A 1 HETATM 9 C C8A ACO . . . C 2 9.184 1.708 -30.268 1 84.4 ? C8A ACO 301 A 1 HETATM 10 N N9A ACO . . . C 2 9.296 2.719 -29.416 1 80.31 ? N9A ACO 301 A 1 HETATM 11 C C1B ACO . . . C 2 8.434 3.87 -29.373 1 85.63 ? C1B ACO 301 A 1 HETATM 12 C C2B ACO . . . C 2 7.921 4.082 -30.761 1 84.41 ? C2B ACO 301 A 1 HETATM 13 O O2B ACO . . . C 2 8.691 5.043 -31.44 1 82.02 ? O2B ACO 301 A 1 HETATM 14 C C3B ACO . . . C 2 6.529 4.578 -30.535 1 86.52 ? C3B ACO 301 A 1 HETATM 15 O O3B ACO . . . C 2 6.552 5.964 -30.202 1 82.7 ? O3B ACO 301 A 1 HETATM 16 P P3B ACO . . . C 2 5.321 6.931 -30.452 1 85.62 ? P3B ACO 301 A 1 HETATM 17 O O7A ACO . . . C 2 5.238 7.685 -29.195 1 89.97 ? O7A ACO 301 A 1 HETATM 18 O O8A ACO . . . C 2 5.63 7.789 -31.616 1 81.2 ? O8A ACO 301 A 1 HETATM 19 O O9A ACO . . . C 2 4.192 6.055 -30.788 1 81.42 ? O9A ACO 301 A 1 HETATM 20 C C4B ACO . . . C 2 6.134 3.745 -29.335 1 86.19 ? C4B ACO 301 A 1 HETATM 21 O O4B ACO . . . C 2 7.324 3.492 -28.619 1 83.29 ? O4B ACO 301 A 1 HETATM 22 C C5B ACO . . . C 2 5.389 2.436 -29.599 1 76.93 ? C5B ACO 301 A 1 HETATM 23 O O5B ACO . . . C 2 5.818 1.642 -30.68 1 82.86 ? O5B ACO 301 A 1 HETATM 24 P P1A ACO . . . C 2 5.171 0.24 -30.942 1 74.82 ? P1A ACO 301 A 1 HETATM 25 O O1A ACO . . . C 2 4.819 0.148 -32.333 1 75.52 ? O1A ACO 301 A 1 HETATM 26 O O2A ACO . . . C 2 4.125 -0.024 -29.957 1 68.95 ? O2A ACO 301 A 1 HETATM 27 O O3A ACO . . . C 2 6.419 -0.619 -30.626 1 77.62 ? O3A ACO 301 A 1 HETATM 28 P P2A ACO . . . C 2 6.625 -1.994 -31.285 1 79.01 ? P2A ACO 301 A 1 HETATM 29 O O4A ACO . . . C 2 7.763 -1.948 -32.19 1 79.96 ? O4A ACO 301 A 1 HETATM 30 O O5A ACO . . . C 2 5.362 -2.487 -31.763 1 71.77 ? O5A ACO 301 A 1 HETATM 31 O O6A ACO . . . C 2 7.02 -2.826 -30.06 1 85.53 ? O6A ACO 301 A 1 HETATM 32 C CBP ACO . . . C 2 8.701 -3.765 -28.793 1 82.56 ? CBP ACO 301 A 1 HETATM 33 C CCP ACO . . . C 2 8.171 -2.481 -29.348 1 81.29 ? CCP ACO 301 A 1 HETATM 34 C CDP ACO . . . C 2 7.592 -4.464 -28.075 1 80.22 ? CDP ACO 301 A 1 HETATM 35 C CEP ACO . . . C 2 9.798 -3.55 -27.783 1 78.68 ? CEP ACO 301 A 1 HETATM 36 C CAP ACO . . . C 2 9.088 -4.596 -29.998 1 88.34 ? CAP ACO 301 A 1 HETATM 37 O OAP ACO . . . C 2 10.042 -3.936 -30.801 1 91.39 ? OAP ACO 301 A 1 HETATM 38 C C9P ACO . . . C 2 9.683 -5.906 -29.631 1 91.71 ? C9P ACO 301 A 1 HETATM 39 O O9P ACO . . . C 2 9.238 -6.925 -30.094 1 96.37 ? O9P ACO 301 A 1 HETATM 40 N N8P ACO . . . C 2 10.688 -5.919 -28.8 1 85.14 ? N8P ACO 301 A 1 HETATM 41 C C7P ACO . . . C 2 11.098 -7.193 -28.246 1 90.96 ? C7P ACO 301 A 1 HETATM 42 C C6P ACO . . . C 2 10.064 -7.807 -27.323 1 87.38 ? C6P ACO 301 A 1 HETATM 43 C C5P ACO . . . C 2 10.59 -7.713 -25.92 1 94.7 ? C5P ACO 301 A 1 HETATM 44 O O5P ACO . . . C 2 11.786 -7.783 -25.769 1 100.03 ? O5P ACO 301 A 1 HETATM 45 N N4P ACO . . . C 2 9.724 -7.556 -24.915 1 90.76 ? N4P ACO 301 A 1 HETATM 46 C C3P ACO . . . C 2 9.999 -8.001 -23.563 1 87.89 ? C3P ACO 301 A 1 HETATM 47 C C2P ACO . . . C 2 9.82 -6.868 -22.58 1 86.69 ? C2P ACO 301 A 1 HETATM 48 S S1P ACO . . . C 2 11.003 -6.977 -21.287 1 109.67 ? S1P ACO 301 A 1 HETATM 49 C C ACO . . . C 2 10.089 -7.662 -20.076 1 90.03 ? C ACO 301 A 1 HETATM 50 O O ACO . . . C 2 10.617 -8.365 -19.246 1 87.36 ? O ACO 301 A 1 HETATM 51 C CH3 ACO . . . C 2 8.627 -7.393 -20.016 1 74.37 ? CH3 ACO 301 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 51 #