data_7DBO # _model_server_result.job_id qoKUDFAFzdSdJ7qppJtcdw _model_server_result.datetime_utc '2024-11-14 06:36:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dbo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":102}' # _entry.id 7DBO # _exptl.entry_id 7DBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7DBO _cell.length_a 118.8 _cell.length_b 118.8 _cell.length_c 68.2 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,L 1 1 B,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 3 A MSE 1 1_555 A N GLU 4 A GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C GLY 22 A GLY 20 1_555 A N MSE 23 A MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C MSE 23 A MSE 21 1_555 A N SER 24 A SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C VAL 74 A VAL 72 1_555 A N MSE 75 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale5 A C MSE 75 A MSE 73 1_555 A N ARG 76 A ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale6 B C GLY 22 B GLY 20 1_555 B N MSE 23 B MSE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 B C MSE 23 B MSE 21 1_555 B N SER 24 B SER 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale8 B C VAL 74 B VAL 72 1_555 B N MSE 75 B MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale9 B C MSE 75 B MSE 73 1_555 B N ARG 76 B ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 227 n n S O2 SO4 doub 228 n n S O3 SO4 sing 229 n n S O4 SO4 sing 230 n n # _atom_sites.entry_id 7DBO _atom_sites.fract_transf_matrix[1][1] 0.008418 _atom_sites.fract_transf_matrix[1][2] 0.00486 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00972 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 101 2 SO4 SO4 . D 2 SO4 A 1 102 3 SO4 SO4 . E 2 SO4 A 1 103 4 SO4 SO4 . F 2 SO4 A 1 104 5 SO4 SO4 . G 2 SO4 A 1 105 7 SO4 SO4 . H 2 SO4 A 1 106 9 SO4 SO4 . I 2 SO4 B 1 101 1 SO4 SO4 . J 2 SO4 B 1 102 8 SO4 SO4 . K 2 SO4 B 1 103 10 SO4 SO4 . L 3 HOH A 1 201 20 HOH HOH . L 3 HOH A 2 202 6 HOH HOH . L 3 HOH A 3 203 43 HOH HOH . L 3 HOH A 4 204 34 HOH HOH . L 3 HOH A 5 205 17 HOH HOH . L 3 HOH A 6 206 55 HOH HOH . L 3 HOH A 7 207 44 HOH HOH . L 3 HOH A 8 208 16 HOH HOH . L 3 HOH A 9 209 19 HOH HOH . L 3 HOH A 10 210 30 HOH HOH . L 3 HOH A 11 211 40 HOH HOH . L 3 HOH A 12 212 52 HOH HOH . L 3 HOH A 13 213 3 HOH HOH . L 3 HOH A 14 214 48 HOH HOH . L 3 HOH A 15 215 29 HOH HOH . L 3 HOH A 16 216 18 HOH HOH . L 3 HOH A 17 217 59 HOH HOH . L 3 HOH A 18 218 11 HOH HOH . L 3 HOH A 19 219 14 HOH HOH . L 3 HOH A 20 220 24 HOH HOH . L 3 HOH A 21 221 57 HOH HOH . L 3 HOH A 22 222 32 HOH HOH . L 3 HOH A 23 223 38 HOH HOH . L 3 HOH A 24 224 49 HOH HOH . L 3 HOH A 25 225 23 HOH HOH . L 3 HOH A 26 226 54 HOH HOH . L 3 HOH A 27 227 37 HOH HOH . L 3 HOH A 28 228 15 HOH HOH . L 3 HOH A 29 229 45 HOH HOH . L 3 HOH A 30 230 28 HOH HOH . L 3 HOH A 31 231 53 HOH HOH . L 3 HOH A 32 232 65 HOH HOH . L 3 HOH A 33 233 66 HOH HOH . L 3 HOH A 34 234 58 HOH HOH . L 3 HOH A 35 235 64 HOH HOH . L 3 HOH A 36 236 39 HOH HOH . L 3 HOH A 37 237 62 HOH HOH . M 3 HOH B 1 201 46 HOH HOH . M 3 HOH B 2 202 41 HOH HOH . M 3 HOH B 3 203 68 HOH HOH . M 3 HOH B 4 204 26 HOH HOH . M 3 HOH B 5 205 70 HOH HOH . M 3 HOH B 6 206 33 HOH HOH . M 3 HOH B 7 207 42 HOH HOH . M 3 HOH B 8 208 27 HOH HOH . M 3 HOH B 9 209 9 HOH HOH . M 3 HOH B 10 210 63 HOH HOH . M 3 HOH B 11 211 10 HOH HOH . M 3 HOH B 12 212 2 HOH HOH . M 3 HOH B 13 213 4 HOH HOH . M 3 HOH B 14 214 35 HOH HOH . M 3 HOH B 15 215 7 HOH HOH . M 3 HOH B 16 216 5 HOH HOH . M 3 HOH B 17 217 36 HOH HOH . M 3 HOH B 18 218 56 HOH HOH . M 3 HOH B 19 219 22 HOH HOH . M 3 HOH B 20 220 12 HOH HOH . M 3 HOH B 21 221 8 HOH HOH . M 3 HOH B 22 222 25 HOH HOH . M 3 HOH B 23 223 67 HOH HOH . M 3 HOH B 24 224 51 HOH HOH . M 3 HOH B 25 225 21 HOH HOH . M 3 HOH B 26 226 31 HOH HOH . M 3 HOH B 27 227 69 HOH HOH . M 3 HOH B 28 228 13 HOH HOH . M 3 HOH B 29 229 60 HOH HOH . M 3 HOH B 30 230 1 HOH HOH . M 3 HOH B 31 231 71 HOH HOH . M 3 HOH B 32 232 50 HOH HOH . M 3 HOH B 33 233 61 HOH HOH . M 3 HOH B 34 234 72 HOH HOH . M 3 HOH B 35 235 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 30.165 64.898 19.322 0.86 46.51 ? S SO4 102 A 1 HETATM 2 O O1 SO4 . . . D 2 30.361 63.769 18.409 0.86 42.88 ? O1 SO4 102 A 1 HETATM 3 O O2 SO4 . . . D 2 30.371 66.123 18.554 0.86 42.26 ? O2 SO4 102 A 1 HETATM 4 O O3 SO4 . . . D 2 28.824 64.779 19.879 0.86 45.16 ? O3 SO4 102 A 1 HETATM 5 O O4 SO4 . . . D 2 31.106 64.903 20.437 0.86 44.64 ? O4 SO4 102 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #