data_7DC1 # _model_server_result.job_id M-O265MOb5fDJUnbEmbJng _model_server_result.datetime_utc '2025-03-05 02:38:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dc1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":102}' # _entry.id 7DC1 # _exptl.entry_id 7DC1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 107.868 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SILVER ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7DC1 _cell.length_a 104.493 _cell.length_b 104.493 _cell.length_c 29.188 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 12 A CYS 12 1_555 C AG AG . A AG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc2 A SG CYS 12 A CYS 12 1_555 D AG AG . A AG 102 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc3 A SG CYS 15 A CYS 15 1_555 C AG AG . A AG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc4 A SG CYS 15 A CYS 15 1_555 D AG AG . A AG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc5 D AG AG . A AG 102 1_555 G O HOH . A HOH 234 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc6 B SG CYS 12 B CYS 12 1_555 E AG AG . B AG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc7 B SG CYS 12 B CYS 12 1_555 F AG AG . B AG 102 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc8 B SG CYS 15 B CYS 15 1_555 E AG AG . B AG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc9 B SG CYS 15 B CYS 15 1_555 F AG AG . B AG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc10 F AG AG . B AG 102 1_555 H O HOH . B HOH 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? # _chem_comp.formula 'Ag 1' _chem_comp.formula_weight 107.868 _chem_comp.id AG _chem_comp.mon_nstd_flag . _chem_comp.name 'SILVER ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DC1 _atom_sites.fract_transf_matrix[1][1] 0.00957 _atom_sites.fract_transf_matrix[1][2] 0.005525 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.034261 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AG A 1 101 1 AG AG . D 2 AG A 1 102 2 AG AG . E 2 AG B 1 101 3 AG AG . F 2 AG B 1 102 4 AG AG . G 3 HOH A 1 201 23 HOH HOH . G 3 HOH A 2 202 36 HOH HOH . G 3 HOH A 3 203 92 HOH HOH . G 3 HOH A 4 204 19 HOH HOH . G 3 HOH A 5 205 83 HOH HOH . G 3 HOH A 6 206 80 HOH HOH . G 3 HOH A 7 207 54 HOH HOH . G 3 HOH A 8 208 9 HOH HOH . G 3 HOH A 9 209 88 HOH HOH . G 3 HOH A 10 210 106 HOH HOH . G 3 HOH A 11 211 70 HOH HOH . G 3 HOH A 12 212 126 HOH HOH . G 3 HOH A 13 213 62 HOH HOH . G 3 HOH A 14 214 29 HOH HOH . G 3 HOH A 15 215 49 HOH HOH . G 3 HOH A 16 216 73 HOH HOH . G 3 HOH A 17 217 16 HOH HOH . G 3 HOH A 18 218 55 HOH HOH . G 3 HOH A 19 219 47 HOH HOH . G 3 HOH A 20 220 46 HOH HOH . G 3 HOH A 21 221 87 HOH HOH . G 3 HOH A 22 222 35 HOH HOH . G 3 HOH A 23 223 18 HOH HOH . G 3 HOH A 24 224 134 HOH HOH . G 3 HOH A 25 225 100 HOH HOH . G 3 HOH A 26 226 76 HOH HOH . G 3 HOH A 27 227 1 HOH HOH . G 3 HOH A 28 228 44 HOH HOH . G 3 HOH A 29 229 15 HOH HOH . G 3 HOH A 30 230 20 HOH HOH . G 3 HOH A 31 231 113 HOH HOH . G 3 HOH A 32 232 8 HOH HOH . G 3 HOH A 33 233 17 HOH HOH . G 3 HOH A 34 234 124 HOH HOH . G 3 HOH A 35 235 28 HOH HOH . G 3 HOH A 36 236 40 HOH HOH . G 3 HOH A 37 237 27 HOH HOH . G 3 HOH A 38 238 66 HOH HOH . G 3 HOH A 39 239 64 HOH HOH . G 3 HOH A 40 240 4 HOH HOH . G 3 HOH A 41 241 41 HOH HOH . G 3 HOH A 42 242 30 HOH HOH . G 3 HOH A 43 243 86 HOH HOH . G 3 HOH A 44 244 96 HOH HOH . G 3 HOH A 45 245 84 HOH HOH . G 3 HOH A 46 246 58 HOH HOH . G 3 HOH A 47 247 125 HOH HOH . G 3 HOH A 48 248 2 HOH HOH . G 3 HOH A 49 249 115 HOH HOH . G 3 HOH A 50 250 111 HOH HOH . G 3 HOH A 51 251 108 HOH HOH . G 3 HOH A 52 252 95 HOH HOH . G 3 HOH A 53 253 38 HOH HOH . G 3 HOH A 54 254 45 HOH HOH . G 3 HOH A 55 255 32 HOH HOH . G 3 HOH A 56 256 119 HOH HOH . G 3 HOH A 57 257 112 HOH HOH . G 3 HOH A 58 258 69 HOH HOH . G 3 HOH A 59 259 79 HOH HOH . G 3 HOH A 60 260 37 HOH HOH . G 3 HOH A 61 261 78 HOH HOH . G 3 HOH A 62 262 67 HOH HOH . G 3 HOH A 63 263 135 HOH HOH . G 3 HOH A 64 264 123 HOH HOH . G 3 HOH A 65 265 39 HOH HOH . G 3 HOH A 66 266 99 HOH HOH . G 3 HOH A 67 267 110 HOH HOH . G 3 HOH A 68 268 72 HOH HOH . G 3 HOH A 69 269 60 HOH HOH . G 3 HOH A 70 270 91 HOH HOH . G 3 HOH A 71 271 122 HOH HOH . H 3 HOH B 1 201 71 HOH HOH . H 3 HOH B 2 202 63 HOH HOH . H 3 HOH B 3 203 48 HOH HOH . H 3 HOH B 4 204 114 HOH HOH . H 3 HOH B 5 205 3 HOH HOH . H 3 HOH B 6 206 13 HOH HOH . H 3 HOH B 7 207 6 HOH HOH . H 3 HOH B 8 208 26 HOH HOH . H 3 HOH B 9 209 98 HOH HOH . H 3 HOH B 10 210 33 HOH HOH . H 3 HOH B 11 211 51 HOH HOH . H 3 HOH B 12 212 21 HOH HOH . H 3 HOH B 13 213 109 HOH HOH . H 3 HOH B 14 214 50 HOH HOH . H 3 HOH B 15 215 12 HOH HOH . H 3 HOH B 16 216 129 HOH HOH . H 3 HOH B 17 217 117 HOH HOH . H 3 HOH B 18 218 11 HOH HOH . H 3 HOH B 19 219 127 HOH HOH . H 3 HOH B 20 220 34 HOH HOH . H 3 HOH B 21 221 65 HOH HOH . H 3 HOH B 22 222 31 HOH HOH . H 3 HOH B 23 223 77 HOH HOH . H 3 HOH B 24 224 22 HOH HOH . H 3 HOH B 25 225 116 HOH HOH . H 3 HOH B 26 226 5 HOH HOH . H 3 HOH B 27 227 61 HOH HOH . H 3 HOH B 28 228 89 HOH HOH . H 3 HOH B 29 229 53 HOH HOH . H 3 HOH B 30 230 14 HOH HOH . H 3 HOH B 31 231 10 HOH HOH . H 3 HOH B 32 232 94 HOH HOH . H 3 HOH B 33 233 132 HOH HOH . H 3 HOH B 34 234 57 HOH HOH . H 3 HOH B 35 235 102 HOH HOH . H 3 HOH B 36 236 42 HOH HOH . H 3 HOH B 37 237 24 HOH HOH . H 3 HOH B 38 238 25 HOH HOH . H 3 HOH B 39 239 52 HOH HOH . H 3 HOH B 40 240 120 HOH HOH . H 3 HOH B 41 241 131 HOH HOH . H 3 HOH B 42 242 7 HOH HOH . H 3 HOH B 43 243 56 HOH HOH . H 3 HOH B 44 244 43 HOH HOH . H 3 HOH B 45 245 121 HOH HOH . H 3 HOH B 46 246 101 HOH HOH . H 3 HOH B 47 247 130 HOH HOH . H 3 HOH B 48 248 107 HOH HOH . H 3 HOH B 49 249 82 HOH HOH . H 3 HOH B 50 250 68 HOH HOH . H 3 HOH B 51 251 90 HOH HOH . H 3 HOH B 52 252 128 HOH HOH . H 3 HOH B 53 253 97 HOH HOH . H 3 HOH B 54 254 103 HOH HOH . H 3 HOH B 55 255 59 HOH HOH . H 3 HOH B 56 256 75 HOH HOH . H 3 HOH B 57 257 85 HOH HOH . H 3 HOH B 58 258 133 HOH HOH . H 3 HOH B 59 259 93 HOH HOH . H 3 HOH B 60 260 81 HOH HOH . H 3 HOH B 61 261 74 HOH HOH . H 3 HOH B 62 262 118 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AG _atom_site.label_atom_id AG _atom_site.label_comp_id AG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -20.452 _atom_site.Cartn_y 33.834 _atom_site.Cartn_z 7.592 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id AG _atom_site.auth_comp_id AG _atom_site.auth_seq_id 102 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #