data_7DCI # _model_server_result.job_id qrTaM8vYWTMT_DG9CaL6tQ _model_server_result.datetime_utc '2024-12-23 02:08:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dci # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7DCI # _exptl.entry_id 7DCI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.74 _cell.angle_gamma 90 _cell.entry_id 7DCI _cell.length_a 92.268 _cell.length_b 38.472 _cell.length_c 38.654 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DCI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -7.203272 0 37.976895 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 11 A LEU 17 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc2 A O VAL 12 A VAL 18 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc3 A O GLU 14 A GLU 20 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc4 A OG1 THR 17 A THR 23 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc5 A OD1 ASN 18 A ASN 24 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc6 A O ILE 21 A ILE 27 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? hydrog WATSON-CRICK hydrog1 B N1 DG 1 B DG 1 1_555 B N3 DC 12 B DC 12 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N2 DG 1 B DG 1 1_555 B O2 DC 12 B DC 12 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O6 DG 1 B DG 1 1_555 B N4 DC 12 B DC 12 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N1 DG 2 B DG 2 1_555 B N3 DC 11 B DC 11 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N2 DG 2 B DG 2 1_555 B O2 DC 11 B DC 11 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O6 DG 2 B DG 2 1_555 B N4 DC 11 B DC 11 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N1 DG 3 B DG 3 1_555 B N3 DC 10 B DC 10 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N2 DG 3 B DG 3 1_555 B O2 DC 10 B DC 10 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B O6 DG 3 B DG 3 1_555 B N4 DC 10 B DC 10 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N1 DA 4 B DA 4 1_555 B N3 DT 9 B DT 9 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N6 DA 4 B DA 4 1_555 B O4 DT 9 B DT 9 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N1 DA 5 B DA 5 1_555 B N3 DT 8 B DT 8 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N6 DA 5 B DA 5 1_555 B O4 DT 8 B DT 8 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N3 DT 6 B DT 6 1_555 B N1 DA 7 B DA 7 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B O4 DT 6 B DT 6 1_555 B N6 DA 7 B DA 7 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N1 DA 7 B DA 7 1_555 B N3 DT 6 B DT 6 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N6 DA 7 B DA 7 1_555 B O4 DT 6 B DT 6 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N3 DT 8 B DT 8 1_555 B N1 DA 5 B DA 5 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B O4 DT 8 B DT 8 1_555 B N6 DA 5 B DA 5 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N3 DT 9 B DT 9 1_555 B N1 DA 4 B DA 4 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B O4 DT 9 B DT 9 1_555 B N6 DA 4 B DA 4 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N3 DC 10 B DC 10 1_555 B N1 DG 3 B DG 3 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N4 DC 10 B DC 10 1_555 B O6 DG 3 B DG 3 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B O2 DC 10 B DC 10 1_555 B N2 DG 3 B DG 3 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B N3 DC 11 B DC 11 1_555 B N1 DG 2 B DG 2 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B N4 DC 11 B DC 11 1_555 B O6 DG 2 B DG 2 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 B O2 DC 11 B DC 11 1_555 B N2 DG 2 B DG 2 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B N3 DC 12 B DC 12 1_555 B N1 DG 1 B DG 1 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 B N4 DC 12 B DC 12 1_555 B O6 DG 1 B DG 1 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 B O2 DC 12 B DC 12 1_555 B N2 DG 1 B DG 1 2_556 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DCI _atom_sites.fract_transf_matrix[1][1] 0.010838 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002056 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025993 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026332 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA A 1 201 1 NA NA . D 4 HOH A 1 301 97 HOH HOH . D 4 HOH A 2 302 65 HOH HOH . D 4 HOH A 3 303 120 HOH HOH . D 4 HOH A 4 304 168 HOH HOH . D 4 HOH A 5 305 71 HOH HOH . D 4 HOH A 6 306 161 HOH HOH . D 4 HOH A 7 307 61 HOH HOH . D 4 HOH A 8 308 140 HOH HOH . D 4 HOH A 9 309 91 HOH HOH . D 4 HOH A 10 310 89 HOH HOH . D 4 HOH A 11 311 124 HOH HOH . D 4 HOH A 12 312 1 HOH HOH . D 4 HOH A 13 313 8 HOH HOH . D 4 HOH A 14 314 48 HOH HOH . D 4 HOH A 15 315 20 HOH HOH . D 4 HOH A 16 316 38 HOH HOH . D 4 HOH A 17 317 93 HOH HOH . D 4 HOH A 18 318 10 HOH HOH . D 4 HOH A 19 319 83 HOH HOH . D 4 HOH A 20 320 70 HOH HOH . D 4 HOH A 21 321 81 HOH HOH . D 4 HOH A 22 322 19 HOH HOH . D 4 HOH A 23 323 35 HOH HOH . D 4 HOH A 24 324 125 HOH HOH . D 4 HOH A 25 325 36 HOH HOH . D 4 HOH A 26 326 31 HOH HOH . D 4 HOH A 27 327 25 HOH HOH . D 4 HOH A 28 328 32 HOH HOH . D 4 HOH A 29 329 22 HOH HOH . D 4 HOH A 30 330 9 HOH HOH . D 4 HOH A 31 331 11 HOH HOH . D 4 HOH A 32 332 40 HOH HOH . D 4 HOH A 33 333 53 HOH HOH . D 4 HOH A 34 334 107 HOH HOH . D 4 HOH A 35 335 29 HOH HOH . D 4 HOH A 36 336 46 HOH HOH . D 4 HOH A 37 337 33 HOH HOH . D 4 HOH A 38 338 28 HOH HOH . D 4 HOH A 39 339 108 HOH HOH . D 4 HOH A 40 340 88 HOH HOH . D 4 HOH A 41 341 21 HOH HOH . D 4 HOH A 42 342 149 HOH HOH . D 4 HOH A 43 343 44 HOH HOH . D 4 HOH A 44 344 39 HOH HOH . D 4 HOH A 45 345 86 HOH HOH . D 4 HOH A 46 346 69 HOH HOH . D 4 HOH A 47 347 78 HOH HOH . D 4 HOH A 48 348 41 HOH HOH . D 4 HOH A 49 349 43 HOH HOH . D 4 HOH A 50 350 122 HOH HOH . D 4 HOH A 51 351 6 HOH HOH . D 4 HOH A 52 352 96 HOH HOH . D 4 HOH A 53 353 30 HOH HOH . D 4 HOH A 54 354 26 HOH HOH . D 4 HOH A 55 355 58 HOH HOH . D 4 HOH A 56 356 99 HOH HOH . D 4 HOH A 57 357 45 HOH HOH . D 4 HOH A 58 358 130 HOH HOH . D 4 HOH A 59 359 142 HOH HOH . D 4 HOH A 60 360 7 HOH HOH . D 4 HOH A 61 361 115 HOH HOH . D 4 HOH A 62 362 105 HOH HOH . D 4 HOH A 63 363 75 HOH HOH . D 4 HOH A 64 364 129 HOH HOH . D 4 HOH A 65 365 133 HOH HOH . D 4 HOH A 66 366 134 HOH HOH . D 4 HOH A 67 367 84 HOH HOH . D 4 HOH A 68 368 160 HOH HOH . D 4 HOH A 69 369 100 HOH HOH . D 4 HOH A 70 370 109 HOH HOH . D 4 HOH A 71 371 92 HOH HOH . D 4 HOH A 72 372 139 HOH HOH . D 4 HOH A 73 373 170 HOH HOH . D 4 HOH A 74 374 85 HOH HOH . D 4 HOH A 75 375 163 HOH HOH . D 4 HOH A 76 376 121 HOH HOH . D 4 HOH A 77 377 127 HOH HOH . D 4 HOH A 78 378 74 HOH HOH . D 4 HOH A 79 379 137 HOH HOH . D 4 HOH A 80 380 114 HOH HOH . D 4 HOH A 81 381 143 HOH HOH . D 4 HOH A 82 382 128 HOH HOH . D 4 HOH A 83 383 162 HOH HOH . D 4 HOH A 84 384 80 HOH HOH . D 4 HOH A 85 385 154 HOH HOH . D 4 HOH A 86 386 87 HOH HOH . D 4 HOH A 87 387 167 HOH HOH . D 4 HOH A 88 388 138 HOH HOH . D 4 HOH A 89 389 132 HOH HOH . D 4 HOH A 90 390 169 HOH HOH . D 4 HOH A 91 391 159 HOH HOH . D 4 HOH A 92 392 106 HOH HOH . D 4 HOH A 93 393 145 HOH HOH . D 4 HOH A 94 394 112 HOH HOH . D 4 HOH A 95 395 131 HOH HOH . D 4 HOH A 96 396 148 HOH HOH . D 4 HOH A 97 397 126 HOH HOH . D 4 HOH A 98 398 72 HOH HOH . D 4 HOH A 99 399 158 HOH HOH . D 4 HOH A 100 400 113 HOH HOH . D 4 HOH A 101 401 117 HOH HOH . D 4 HOH A 102 402 79 HOH HOH . D 4 HOH A 103 403 110 HOH HOH . D 4 HOH A 104 404 135 HOH HOH . D 4 HOH A 105 405 73 HOH HOH . E 4 HOH B 1 101 95 HOH HOH . E 4 HOH B 2 102 4 HOH HOH . E 4 HOH B 3 103 157 HOH HOH . E 4 HOH B 4 104 23 HOH HOH . E 4 HOH B 5 105 51 HOH HOH . E 4 HOH B 6 106 3 HOH HOH . E 4 HOH B 7 107 50 HOH HOH . E 4 HOH B 8 108 54 HOH HOH . E 4 HOH B 9 109 27 HOH HOH . E 4 HOH B 10 110 118 HOH HOH . E 4 HOH B 11 111 152 HOH HOH . E 4 HOH B 12 112 55 HOH HOH . E 4 HOH B 13 113 56 HOH HOH . E 4 HOH B 14 114 57 HOH HOH . E 4 HOH B 15 115 67 HOH HOH . E 4 HOH B 16 116 18 HOH HOH . E 4 HOH B 17 117 59 HOH HOH . E 4 HOH B 18 118 16 HOH HOH . E 4 HOH B 19 119 171 HOH HOH . E 4 HOH B 20 120 64 HOH HOH . E 4 HOH B 21 121 2 HOH HOH . E 4 HOH B 22 122 104 HOH HOH . E 4 HOH B 23 123 15 HOH HOH . E 4 HOH B 24 124 102 HOH HOH . E 4 HOH B 25 125 146 HOH HOH . E 4 HOH B 26 126 82 HOH HOH . E 4 HOH B 27 127 103 HOH HOH . E 4 HOH B 28 128 12 HOH HOH . E 4 HOH B 29 129 111 HOH HOH . E 4 HOH B 30 130 123 HOH HOH . E 4 HOH B 31 131 13 HOH HOH . E 4 HOH B 32 132 17 HOH HOH . E 4 HOH B 33 133 47 HOH HOH . E 4 HOH B 34 134 52 HOH HOH . E 4 HOH B 35 135 14 HOH HOH . E 4 HOH B 36 136 37 HOH HOH . E 4 HOH B 37 137 150 HOH HOH . E 4 HOH B 38 138 165 HOH HOH . E 4 HOH B 39 139 5 HOH HOH . E 4 HOH B 40 140 34 HOH HOH . E 4 HOH B 41 141 62 HOH HOH . E 4 HOH B 42 142 63 HOH HOH . E 4 HOH B 43 143 101 HOH HOH . E 4 HOH B 44 144 155 HOH HOH . E 4 HOH B 45 145 141 HOH HOH . E 4 HOH B 46 146 66 HOH HOH . E 4 HOH B 47 147 77 HOH HOH . E 4 HOH B 48 148 151 HOH HOH . E 4 HOH B 49 149 49 HOH HOH . E 4 HOH B 50 150 68 HOH HOH . E 4 HOH B 51 151 116 HOH HOH . E 4 HOH B 52 152 153 HOH HOH . E 4 HOH B 53 153 164 HOH HOH . E 4 HOH B 54 154 24 HOH HOH . E 4 HOH B 55 155 136 HOH HOH . E 4 HOH B 56 156 147 HOH HOH . E 4 HOH B 57 157 42 HOH HOH . E 4 HOH B 58 158 76 HOH HOH . E 4 HOH B 59 159 144 HOH HOH . E 4 HOH B 60 160 94 HOH HOH . E 4 HOH B 61 161 98 HOH HOH . E 4 HOH B 62 162 119 HOH HOH . E 4 HOH B 63 163 90 HOH HOH . E 4 HOH B 64 164 60 HOH HOH . E 4 HOH B 65 165 166 HOH HOH . E 4 HOH B 66 166 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -19.864 _atom_site.Cartn_y -3.35 _atom_site.Cartn_z 6.389 _atom_site.occupancy 0.94 _atom_site.B_iso_or_equiv 18.32 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 208 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #