data_7DCK
#
_model_server_result.job_id            ZIWA4BKwD12wilZVsE-erQ 
_model_server_result.datetime_utc      '2024-12-21 17:13:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7dck 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    7DCK 
#
_exptl.entry_id    7DCK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7DCK 
_cell.length_a            164.288 
_cell.length_b            164.288 
_cell.length_c            55.645 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DCK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    'P 61' 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 163 A CYS 163 1_555 A SG CYS 220 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
disulf ? disulf2 B SG CYS 163 B CYS 163 1_555 B SG CYS 220 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc1 A NE2 HIS 79 A HIS 79 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc2 A ND1 HIS 81 A HIS 81 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
metalc ? metalc3 A OD2 ASP 83 A ASP 83 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc4 A NE2 HIS 84 A HIS 84 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc5 A NE2 HIS 165 A HIS 165 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
metalc ? metalc6 A NE2 HIS 219 A HIS 219 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc7 B NE2 HIS 79 B HIS 79 1_555 F MN MN . B MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc8 B ND1 HIS 81 B HIS 81 1_555 F MN MN . B MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc9 B OD2 ASP 83 B ASP 83 1_555 E MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc10 B NE2 HIS 84 B HIS 84 1_555 E MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
metalc ? metalc11 B NE2 HIS 165 B HIS 165 1_555 F MN MN . B MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc12 B NE2 HIS 219 B HIS 219 1_555 E MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7DCK 
_atom_sites.fract_transf_matrix[1][1]    0.006087 
_atom_sites.fract_transf_matrix[1][2]    0.003514 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007029 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017971 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 301 249 MN MN . 
D 2 MN A 1 302 250 MN MN . 
E 2 MN B 1 301 249 MN MN . 
F 2 MN B 1 302 250 MN MN . 
G 3 HOH A 1 401 22 HOH HOH . 
G 3 HOH A 2 402 113 HOH HOH . 
G 3 HOH A 3 403 94 HOH HOH . 
G 3 HOH A 4 404 6 HOH HOH . 
G 3 HOH A 5 405 87 HOH HOH . 
G 3 HOH A 6 406 16 HOH HOH . 
G 3 HOH A 7 407 71 HOH HOH . 
G 3 HOH A 8 408 97 HOH HOH . 
G 3 HOH A 9 409 82 HOH HOH . 
G 3 HOH A 10 410 12 HOH HOH . 
G 3 HOH A 11 411 46 HOH HOH . 
G 3 HOH A 12 412 23 HOH HOH . 
G 3 HOH A 13 413 41 HOH HOH . 
G 3 HOH A 14 414 89 HOH HOH . 
G 3 HOH A 15 415 4 HOH HOH . 
G 3 HOH A 16 416 91 HOH HOH . 
G 3 HOH A 17 417 69 HOH HOH . 
G 3 HOH A 18 418 32 HOH HOH . 
G 3 HOH A 19 419 34 HOH HOH . 
G 3 HOH A 20 420 84 HOH HOH . 
G 3 HOH A 21 421 107 HOH HOH . 
G 3 HOH A 22 422 108 HOH HOH . 
G 3 HOH A 23 423 51 HOH HOH . 
G 3 HOH A 24 424 24 HOH HOH . 
G 3 HOH A 25 425 81 HOH HOH . 
G 3 HOH A 26 426 45 HOH HOH . 
G 3 HOH A 27 427 96 HOH HOH . 
G 3 HOH A 28 428 61 HOH HOH . 
G 3 HOH A 29 429 19 HOH HOH . 
G 3 HOH A 30 430 76 HOH HOH . 
G 3 HOH A 31 431 27 HOH HOH . 
G 3 HOH A 32 432 65 HOH HOH . 
G 3 HOH A 33 433 42 HOH HOH . 
G 3 HOH A 34 434 20 HOH HOH . 
G 3 HOH A 35 435 29 HOH HOH . 
G 3 HOH A 36 436 74 HOH HOH . 
G 3 HOH A 37 437 95 HOH HOH . 
G 3 HOH A 38 438 49 HOH HOH . 
G 3 HOH A 39 439 88 HOH HOH . 
G 3 HOH A 40 440 9 HOH HOH . 
G 3 HOH A 41 441 60 HOH HOH . 
G 3 HOH A 42 442 43 HOH HOH . 
G 3 HOH A 43 443 100 HOH HOH . 
G 3 HOH A 44 444 115 HOH HOH . 
G 3 HOH A 45 445 116 HOH HOH . 
G 3 HOH A 46 446 68 HOH HOH . 
G 3 HOH A 47 447 31 HOH HOH . 
G 3 HOH A 48 448 52 HOH HOH . 
G 3 HOH A 49 449 114 HOH HOH . 
G 3 HOH A 50 450 50 HOH HOH . 
G 3 HOH A 51 451 40 HOH HOH . 
G 3 HOH A 52 452 85 HOH HOH . 
G 3 HOH A 53 453 99 HOH HOH . 
G 3 HOH A 54 454 119 HOH HOH . 
G 3 HOH A 55 455 59 HOH HOH . 
G 3 HOH A 56 456 25 HOH HOH . 
G 3 HOH A 57 457 101 HOH HOH . 
G 3 HOH A 58 458 117 HOH HOH . 
G 3 HOH A 59 459 86 HOH HOH . 
G 3 HOH A 60 460 53 HOH HOH . 
G 3 HOH A 61 461 54 HOH HOH . 
G 3 HOH A 62 462 110 HOH HOH . 
G 3 HOH A 63 463 103 HOH HOH . 
H 3 HOH B 1 401 48 HOH HOH . 
H 3 HOH B 2 402 10 HOH HOH . 
H 3 HOH B 3 403 8 HOH HOH . 
H 3 HOH B 4 404 11 HOH HOH . 
H 3 HOH B 5 405 1 HOH HOH . 
H 3 HOH B 6 406 67 HOH HOH . 
H 3 HOH B 7 407 3 HOH HOH . 
H 3 HOH B 8 408 35 HOH HOH . 
H 3 HOH B 9 409 75 HOH HOH . 
H 3 HOH B 10 410 66 HOH HOH . 
H 3 HOH B 11 411 13 HOH HOH . 
H 3 HOH B 12 412 44 HOH HOH . 
H 3 HOH B 13 413 28 HOH HOH . 
H 3 HOH B 14 414 26 HOH HOH . 
H 3 HOH B 15 415 58 HOH HOH . 
H 3 HOH B 16 416 33 HOH HOH . 
H 3 HOH B 17 417 7 HOH HOH . 
H 3 HOH B 18 418 18 HOH HOH . 
H 3 HOH B 19 419 120 HOH HOH . 
H 3 HOH B 20 420 70 HOH HOH . 
H 3 HOH B 21 421 63 HOH HOH . 
H 3 HOH B 22 422 15 HOH HOH . 
H 3 HOH B 23 423 93 HOH HOH . 
H 3 HOH B 24 424 73 HOH HOH . 
H 3 HOH B 25 425 39 HOH HOH . 
H 3 HOH B 26 426 118 HOH HOH . 
H 3 HOH B 27 427 62 HOH HOH . 
H 3 HOH B 28 428 2 HOH HOH . 
H 3 HOH B 29 429 109 HOH HOH . 
H 3 HOH B 30 430 36 HOH HOH . 
H 3 HOH B 31 431 102 HOH HOH . 
H 3 HOH B 32 432 55 HOH HOH . 
H 3 HOH B 33 433 80 HOH HOH . 
H 3 HOH B 34 434 72 HOH HOH . 
H 3 HOH B 35 435 37 HOH HOH . 
H 3 HOH B 36 436 92 HOH HOH . 
H 3 HOH B 37 437 5 HOH HOH . 
H 3 HOH B 38 438 57 HOH HOH . 
H 3 HOH B 39 439 104 HOH HOH . 
H 3 HOH B 40 440 30 HOH HOH . 
H 3 HOH B 41 441 56 HOH HOH . 
H 3 HOH B 42 442 21 HOH HOH . 
H 3 HOH B 43 443 78 HOH HOH . 
H 3 HOH B 44 444 17 HOH HOH . 
H 3 HOH B 45 445 14 HOH HOH . 
H 3 HOH B 46 446 79 HOH HOH . 
H 3 HOH B 47 447 38 HOH HOH . 
H 3 HOH B 48 448 47 HOH HOH . 
H 3 HOH B 49 449 98 HOH HOH . 
H 3 HOH B 50 450 112 HOH HOH . 
H 3 HOH B 51 451 105 HOH HOH . 
H 3 HOH B 52 452 106 HOH HOH . 
H 3 HOH B 53 453 83 HOH HOH . 
H 3 HOH B 54 454 77 HOH HOH . 
H 3 HOH B 55 455 64 HOH HOH . 
H 3 HOH B 56 456 90 HOH HOH . 
H 3 HOH B 57 457 111 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               28.596 
_atom_site.Cartn_y               -89.068 
_atom_site.Cartn_z               34.441 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        80.08 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#