data_7DE7 # _model_server_result.job_id wIuMDFK4ndg7HAeRguYpgw _model_server_result.datetime_utc '2024-10-18 14:37:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7de7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 7DE7 # _exptl.entry_id 7DE7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 250.332 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2-{[(2R)-2-{[(2S)-2-{[(2R)-2-hydroxypropyl]oxy}propyl]oxy}propyl]oxy}propan-1-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.1 _cell.angle_gamma 90 _cell.entry_id 7DE7 _cell.length_a 32.782 _cell.length_b 75.005 _cell.length_c 42.939 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DE7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O5' _chem_comp.formula_weight 250.332 _chem_comp.id 2Q5 _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2-{[(2R)-2-{[(2S)-2-{[(2R)-2-hydroxypropyl]oxy}propyl]oxy}propyl]oxy}propan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C11 2Q5 sing 1 n n O5 C10 2Q5 sing 2 n n C10 C11 2Q5 sing 3 n n C11 O4 2Q5 sing 4 n n O4 C8 2Q5 sing 5 n n C8 C7 2Q5 sing 6 n n C9 C7 2Q5 sing 7 n n C7 O3 2Q5 sing 8 n n O3 C4 2Q5 sing 9 n n C4 C5 2Q5 sing 10 n n C5 O2 2Q5 sing 11 n n C5 C6 2Q5 sing 12 n n O2 C3 2Q5 sing 13 n n OH C2 2Q5 sing 14 n n C3 C2 2Q5 sing 15 n n C2 C1 2Q5 sing 16 n n OH H1 2Q5 sing 17 n n C2 H2 2Q5 sing 18 n n C1 H3 2Q5 sing 19 n n C1 H4 2Q5 sing 20 n n C1 H5 2Q5 sing 21 n n C3 H6 2Q5 sing 22 n n C3 H7 2Q5 sing 23 n n C5 H8 2Q5 sing 24 n n C6 H9 2Q5 sing 25 n n C6 H10 2Q5 sing 26 n n C6 H11 2Q5 sing 27 n n C4 H12 2Q5 sing 28 n n C4 H13 2Q5 sing 29 n n C7 H14 2Q5 sing 30 n n C9 H15 2Q5 sing 31 n n C9 H16 2Q5 sing 32 n n C9 H17 2Q5 sing 33 n n C8 H18 2Q5 sing 34 n n C8 H19 2Q5 sing 35 n n C11 H20 2Q5 sing 36 n n C12 H21 2Q5 sing 37 n n C12 H22 2Q5 sing 38 n n C12 H23 2Q5 sing 39 n n C10 H24 2Q5 sing 40 n n C10 H25 2Q5 sing 41 n n O5 H26 2Q5 sing 42 n n # _atom_sites.entry_id 7DE7 _atom_sites.fract_transf_matrix[1][1] 0.030505 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0071 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013332 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023911 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2Q5 A 1 701 701 2Q5 2Q5 . D 3 HOH A 1 801 103 HOH HOH . D 3 HOH A 2 802 94 HOH HOH . D 3 HOH A 3 803 11 HOH HOH . D 3 HOH A 4 804 41 HOH HOH . D 3 HOH A 5 805 18 HOH HOH . D 3 HOH A 6 806 37 HOH HOH . D 3 HOH A 7 807 17 HOH HOH . D 3 HOH A 8 808 13 HOH HOH . D 3 HOH A 9 809 82 HOH HOH . D 3 HOH A 10 810 8 HOH HOH . D 3 HOH A 11 811 71 HOH HOH . D 3 HOH A 12 812 150 HOH HOH . D 3 HOH A 13 813 118 HOH HOH . D 3 HOH A 14 814 55 HOH HOH . D 3 HOH A 15 815 44 HOH HOH . D 3 HOH A 16 816 113 HOH HOH . D 3 HOH A 17 817 42 HOH HOH . D 3 HOH A 18 818 104 HOH HOH . D 3 HOH A 19 819 166 HOH HOH . D 3 HOH A 20 820 101 HOH HOH . D 3 HOH A 21 821 58 HOH HOH . D 3 HOH A 22 822 136 HOH HOH . D 3 HOH A 23 823 159 HOH HOH . D 3 HOH A 24 824 99 HOH HOH . D 3 HOH A 25 825 65 HOH HOH . D 3 HOH A 26 826 67 HOH HOH . D 3 HOH A 27 827 75 HOH HOH . D 3 HOH A 28 828 6 HOH HOH . D 3 HOH A 29 829 15 HOH HOH . D 3 HOH A 30 830 33 HOH HOH . D 3 HOH A 31 831 90 HOH HOH . D 3 HOH A 32 832 102 HOH HOH . D 3 HOH A 33 833 47 HOH HOH . D 3 HOH A 34 834 24 HOH HOH . D 3 HOH A 35 835 83 HOH HOH . D 3 HOH A 36 836 97 HOH HOH . D 3 HOH A 37 837 96 HOH HOH . D 3 HOH A 38 838 7 HOH HOH . D 3 HOH A 39 839 4 HOH HOH . D 3 HOH A 40 840 29 HOH HOH . D 3 HOH A 41 841 50 HOH HOH . D 3 HOH A 42 842 54 HOH HOH . D 3 HOH A 43 843 138 HOH HOH . D 3 HOH A 44 844 85 HOH HOH . D 3 HOH A 45 845 140 HOH HOH . D 3 HOH A 46 846 107 HOH HOH . D 3 HOH A 47 847 23 HOH HOH . D 3 HOH A 48 848 149 HOH HOH . D 3 HOH A 49 849 89 HOH HOH . D 3 HOH A 50 850 32 HOH HOH . D 3 HOH A 51 851 151 HOH HOH . D 3 HOH A 52 852 87 HOH HOH . D 3 HOH A 53 853 146 HOH HOH . D 3 HOH A 54 854 9 HOH HOH . D 3 HOH A 55 855 28 HOH HOH . D 3 HOH A 56 856 120 HOH HOH . D 3 HOH A 57 857 100 HOH HOH . D 3 HOH A 58 858 139 HOH HOH . D 3 HOH A 59 859 64 HOH HOH . D 3 HOH A 60 860 20 HOH HOH . D 3 HOH A 61 861 43 HOH HOH . D 3 HOH A 62 862 152 HOH HOH . D 3 HOH A 63 863 125 HOH HOH . D 3 HOH A 64 864 72 HOH HOH . D 3 HOH A 65 865 162 HOH HOH . D 3 HOH A 66 866 48 HOH HOH . D 3 HOH A 67 867 53 HOH HOH . D 3 HOH A 68 868 160 HOH HOH . D 3 HOH A 69 869 84 HOH HOH . D 3 HOH A 70 870 155 HOH HOH . D 3 HOH A 71 871 127 HOH HOH . D 3 HOH A 72 872 1 HOH HOH . D 3 HOH A 73 873 92 HOH HOH . D 3 HOH A 74 874 121 HOH HOH . D 3 HOH A 75 875 156 HOH HOH . D 3 HOH A 76 876 122 HOH HOH . D 3 HOH A 77 877 144 HOH HOH . D 3 HOH A 78 878 86 HOH HOH . D 3 HOH A 79 879 147 HOH HOH . D 3 HOH A 80 880 134 HOH HOH . D 3 HOH A 81 881 167 HOH HOH . D 3 HOH A 82 882 142 HOH HOH . D 3 HOH A 83 883 109 HOH HOH . D 3 HOH A 84 884 123 HOH HOH . E 3 HOH B 1 701 25 HOH HOH . E 3 HOH B 2 702 70 HOH HOH . E 3 HOH B 3 703 157 HOH HOH . E 3 HOH B 4 704 10 HOH HOH . E 3 HOH B 5 705 49 HOH HOH . E 3 HOH B 6 706 126 HOH HOH . E 3 HOH B 7 707 69 HOH HOH . E 3 HOH B 8 708 114 HOH HOH . E 3 HOH B 9 709 26 HOH HOH . E 3 HOH B 10 710 31 HOH HOH . E 3 HOH B 11 711 5 HOH HOH . E 3 HOH B 12 712 91 HOH HOH . E 3 HOH B 13 713 161 HOH HOH . E 3 HOH B 14 714 106 HOH HOH . E 3 HOH B 15 715 93 HOH HOH . E 3 HOH B 16 716 112 HOH HOH . E 3 HOH B 17 717 12 HOH HOH . E 3 HOH B 18 718 77 HOH HOH . E 3 HOH B 19 719 88 HOH HOH . E 3 HOH B 20 720 66 HOH HOH . E 3 HOH B 21 721 16 HOH HOH . E 3 HOH B 22 722 68 HOH HOH . E 3 HOH B 23 723 22 HOH HOH . E 3 HOH B 24 724 52 HOH HOH . E 3 HOH B 25 725 154 HOH HOH . E 3 HOH B 26 726 51 HOH HOH . E 3 HOH B 27 727 81 HOH HOH . E 3 HOH B 28 728 79 HOH HOH . E 3 HOH B 29 729 135 HOH HOH . E 3 HOH B 30 730 2 HOH HOH . E 3 HOH B 31 731 34 HOH HOH . E 3 HOH B 32 732 46 HOH HOH . E 3 HOH B 33 733 3 HOH HOH . E 3 HOH B 34 734 148 HOH HOH . E 3 HOH B 35 735 76 HOH HOH . E 3 HOH B 36 736 45 HOH HOH . E 3 HOH B 37 737 95 HOH HOH . E 3 HOH B 38 738 60 HOH HOH . E 3 HOH B 39 739 27 HOH HOH . E 3 HOH B 40 740 59 HOH HOH . E 3 HOH B 41 741 38 HOH HOH . E 3 HOH B 42 742 119 HOH HOH . E 3 HOH B 43 743 74 HOH HOH . E 3 HOH B 44 744 132 HOH HOH . E 3 HOH B 45 745 108 HOH HOH . E 3 HOH B 46 746 153 HOH HOH . E 3 HOH B 47 747 73 HOH HOH . E 3 HOH B 48 748 130 HOH HOH . E 3 HOH B 49 749 21 HOH HOH . E 3 HOH B 50 750 57 HOH HOH . E 3 HOH B 51 751 30 HOH HOH . E 3 HOH B 52 752 63 HOH HOH . E 3 HOH B 53 753 14 HOH HOH . E 3 HOH B 54 754 98 HOH HOH . E 3 HOH B 55 755 40 HOH HOH . E 3 HOH B 56 756 137 HOH HOH . E 3 HOH B 57 757 145 HOH HOH . E 3 HOH B 58 758 158 HOH HOH . E 3 HOH B 59 759 129 HOH HOH . E 3 HOH B 60 760 141 HOH HOH . E 3 HOH B 61 761 168 HOH HOH . E 3 HOH B 62 762 163 HOH HOH . E 3 HOH B 63 763 128 HOH HOH . E 3 HOH B 64 764 61 HOH HOH . E 3 HOH B 65 765 165 HOH HOH . E 3 HOH B 66 766 105 HOH HOH . E 3 HOH B 67 767 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH 2Q5 . . . C 2 -1.13 70.319 23.831 1 28.72 ? OH 2Q5 701 A 1 HETATM 2 C C2 2Q5 . . . C 2 -0.209 70.23 22.768 1 35.98 ? C2 2Q5 701 A 1 HETATM 3 C C1 2Q5 . . . C 2 0.121 71.577 22.232 1 31.4 ? C1 2Q5 701 A 1 HETATM 4 C C3 2Q5 . . . C 2 -0.692 69.27 21.702 1 24.1 ? C3 2Q5 701 A 1 HETATM 5 O O2 2Q5 . . . C 2 0.016 69.571 20.513 1 42.99 ? O2 2Q5 701 A 1 HETATM 6 C C5 2Q5 . . . C 2 -0.478 68.887 19.364 1 39.54 ? C5 2Q5 701 A 1 HETATM 7 C C6 2Q5 . . . C 2 0.091 69.565 18.159 1 24.34 ? C6 2Q5 701 A 1 HETATM 8 C C4 2Q5 . . . C 2 -0.111 67.419 19.452 1 30.75 ? C4 2Q5 701 A 1 HETATM 9 O O3 2Q5 . . . C 2 1.074 67.156 18.721 1 22.13 ? O3 2Q5 701 A 1 HETATM 10 C C7 2Q5 . . . C 2 1.062 65.945 17.939 1 34.46 ? C7 2Q5 701 A 1 HETATM 11 C C9 2Q5 . . . C 2 -0.22 65.726 17.194 1 23.36 ? C9 2Q5 701 A 1 HETATM 12 C C8 2Q5 . . . C 2 1.484 64.732 18.748 1 48.34 ? C8 2Q5 701 A 1 HETATM 13 O O4 2Q5 . . . C 2 2.341 65.068 19.83 1 36.17 ? O4 2Q5 701 A 1 HETATM 14 C C11 2Q5 . . . C 2 3.484 64.214 19.94 1 45.53 ? C11 2Q5 701 A 1 HETATM 15 C C12 2Q5 . . . C 2 3.068 62.817 19.615 1 29.72 ? C12 2Q5 701 A 1 HETATM 16 C C10 2Q5 . . . C 2 3.965 64.302 21.369 1 53.08 ? C10 2Q5 701 A 1 HETATM 17 O O5 2Q5 . . . C 2 3.5 63.181 22.114 1 62.3 ? O5 2Q5 701 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #