data_7DFZ # _model_server_result.job_id zgrKUQHqT4fwUc1TpmaSGA _model_server_result.datetime_utc '2024-10-11 00:30:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dfz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1306}' # _entry.id 7DFZ # _exptl.entry_id 7DFZ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 409.425 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3~{R},4~{S})-1-(4-fluorophenyl)-3-[(3~{S})-3-(4-fluorophenyl)-3-oxidanyl-propyl]-4-(4-hydroxyphenyl)azetidin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DFZ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DFZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 NAG NAG C1 O1 . O3 HO3 . sing 3 ? 3 2 1 NAG NAG C1 O1 . O3 HO3 . sing 4 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 5 ? 4 3 2 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 E 1 NAG E 1 NAG 2 n B NAG 2 E 2 NAG E 2 NAG 2 n B NAG 3 E 3 NAG E 3 NAG 3 n C NAG 1 H 1 NAG H 1 NAG 3 n C NAG 2 H 2 NAG H 2 NAG 4 n D NAG 1 J 1 NAG J 1 NAG 4 n D NAG 2 J 2 NAG J 2 NAG 4 n D NAG 3 J 3 NAG J 3 NAG 2 n E NAG 1 P 1 NAG P 1 NAG 2 n E NAG 2 P 2 NAG P 2 NAG 2 n E NAG 3 P 3 NAG P 3 NAG 4 n F NAG 1 T 1 NAG T 1 NAG 4 n F NAG 2 T 2 NAG T 2 NAG 4 n F NAG 3 T 3 NAG T 3 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 471 A CYS 471 1_555 A SG CYS 485 A CYS 485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 525 A CYS 525 1_555 A SG CYS 542 A CYS 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 920 A CYS 920 1_555 A SG CYS 925 A CYS 925 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 A SG CYS 966 A CYS 966 1_555 A SG CYS 1024 A CYS 1024 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 A SG CYS 967 A CYS 967 1_555 A SG CYS 993 A CYS 993 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 A SG CYS 980 A CYS 980 1_555 A SG CYS 989 A CYS 989 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A ND2 ASN 416 A ASN 416 1_555 I C1 NAG . A NAG 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 A ND2 ASN 431 A ASN 431 1_555 G C1 NAG . A NAG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale3 A ND2 ASN 464 A ASN 464 1_555 B C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale4 A ND2 ASN 479 A ASN 479 1_555 K C1 NAG . A NAG 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale5 A ND2 ASN 497 A ASN 497 1_555 D C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale6 A ND2 ASN 506 A ASN 506 1_555 C C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale7 A ND2 ASN 909 A ASN 909 1_555 E C1 NAG . P NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale8 A ND2 ASN 927 A ASN 927 1_555 H C1 NAG . A NAG 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale9 A ND2 ASN 1037 A ASN 1037 1_555 F C1 NAG . T NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale10 A ND2 ASN 1075 A ASN 1075 1_555 J C1 NAG . A NAG 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale11 B O4 NAG . E NAG 1 1_555 B C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale12 B O3 NAG . E NAG 2 1_555 B C1 NAG . E NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale13 C O3 NAG . H NAG 1 1_555 C C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale14 D O4 NAG . J NAG 1 1_555 D C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale15 D O4 NAG . J NAG 2 1_555 D C1 NAG . J NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale16 E O4 NAG . P NAG 1 1_555 E C1 NAG . P NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale17 E O3 NAG . P NAG 2 1_555 E C1 NAG . P NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale18 F O4 NAG . T NAG 1 1_555 F C1 NAG . T NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale19 F O4 NAG . T NAG 2 1_555 F C1 NAG . T NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? # _chem_comp.formula 'C24 H21 F2 N O3' _chem_comp.formula_weight 409.425 _chem_comp.id H56 _chem_comp.mon_nstd_flag . _chem_comp.name (3~{R},4~{S})-1-(4-fluorophenyl)-3-[(3~{S})-3-(4-fluorophenyl)-3-oxidanyl-propyl]-4-(4-hydroxyphenyl)azetidin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DFZ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 NAG A 1 1301 1301 NAG NAG . H 5 NAG A 1 1302 1302 NAG NAG . I 5 NAG A 1 1303 1303 NAG NAG . J 5 NAG A 1 1304 1304 NAG NAG . K 5 NAG A 1 1305 1305 NAG NAG . L 6 H56 A 1 1306 1306 H56 H56 . M 7 CLR A 1 1307 1307 CLR CLR . N 7 CLR A 1 1308 1308 CLR CLR . O 7 CLR A 1 1309 1309 CLR CLR . P 7 CLR A 1 1310 1310 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 H56 . . . L 6 171.027 174.932 188.02 1 85.03 0 C4 H56 1306 A 1 HETATM 2 C C5 H56 . . . L 6 170.444 174.576 189.152 1 85.03 0 C5 H56 1306 A 1 HETATM 3 C C6 H56 . . . L 6 170.948 175.137 190.486 1 85.03 0 C6 H56 1306 A 1 HETATM 4 C C7 H56 . . . L 6 171.966 175.977 190.507 1 85.03 0 C7 H56 1306 A 1 HETATM 5 C C8 H56 . . . L 6 172.642 176.391 189.197 1 85.03 0 C8 H56 1306 A 1 HETATM 6 C C10 H56 . . . L 6 173.217 177.962 183.894 1 85.03 0 C10 H56 1306 A 1 HETATM 7 C C13 H56 . . . L 6 174.122 178.876 180.75 1 85.03 0 C13 H56 1306 A 1 HETATM 8 C C15 H56 . . . L 6 174.535 176.971 179.214 1 85.03 0 C15 H56 1306 A 1 HETATM 9 O O1 H56 . . . L 6 174.705 178.391 186.773 1 85.03 0 O1 H56 1306 A 1 HETATM 10 C C2 H56 . . . L 6 172.871 176.009 185.329 1 85.03 0 C2 H56 1306 A 1 HETATM 11 C C3 H56 . . . L 6 172.21 175.907 188.045 1 85.03 0 C3 H56 1306 A 1 HETATM 12 C C9 H56 . . . L 6 173.8 176.908 184.958 1 85.03 0 C9 H56 1306 A 1 HETATM 13 C C12 H56 . . . L 6 173.922 179.603 182.096 1 85.03 0 C12 H56 1306 A 1 HETATM 14 C C16 H56 . . . L 6 174.425 177.733 178.14 1 85.03 0 C16 H56 1306 A 1 HETATM 15 C C18 H56 . . . L 6 173.991 179.746 179.495 1 85.03 0 C18 H56 1306 A 1 HETATM 16 C C1 H56 . . . L 6 174.039 177.535 186.296 1 85.03 0 C1 H56 1306 A 1 HETATM 17 N N1 H56 . . . L 6 172.873 176.318 186.801 1 85.03 0 N1 H56 1306 A 1 HETATM 18 O O2 H56 . . . L 6 174.348 170.647 183.514 1 85.03 0 O2 H56 1306 A 1 HETATM 19 O O3 H56 . . . L 6 172.556 179.842 182.198 1 85.03 0 O3 H56 1306 A 1 HETATM 20 C C11 H56 . . . L 6 174.368 178.88 183.388 1 85.03 0 C11 H56 1306 A 1 HETATM 21 C C14 H56 . . . L 6 174.366 177.579 180.612 1 85.03 0 C14 H56 1306 A 1 HETATM 22 C C17 H56 . . . L 6 174.132 179.225 178.291 1 85.03 0 C17 H56 1306 A 1 HETATM 23 C C19 H56 . . . L 6 173.282 174.555 184.879 1 85.03 0 C19 H56 1306 A 1 HETATM 24 C C20 H56 . . . L 6 173.588 173.614 185.757 1 85.03 0 C20 H56 1306 A 1 HETATM 25 C C21 H56 . . . L 6 173.977 172.21 185.262 1 85.03 0 C21 H56 1306 A 1 HETATM 26 C C22 H56 . . . L 6 173.995 171.933 183.962 1 85.03 0 C22 H56 1306 A 1 HETATM 27 C C23 H56 . . . L 6 173.636 173.021 182.944 1 85.03 0 C23 H56 1306 A 1 HETATM 28 C C24 H56 . . . L 6 173.294 174.227 183.373 1 85.03 0 C24 H56 1306 A 1 HETATM 29 F F1 H56 . . . L 6 170.345 174.769 191.656 1 85.03 0 F1 H56 1306 A 1 HETATM 30 F F2 H56 . . . L 6 174.57 177.192 176.897 1 85.03 0 F2 H56 1306 A 1 HETATM 31 H H4 H56 . . . L 6 170.669 174.534 187.072 1 85.03 0 H4 H56 1306 A 1 HETATM 32 H H5 H56 . . . L 6 169.604 173.884 189.137 1 85.03 0 H5 H56 1306 A 1 HETATM 33 H H7 H56 . . . L 6 172.324 176.375 191.454 1 85.03 0 H7 H56 1306 A 1 HETATM 34 H H8 H56 . . . L 6 173.481 177.082 189.215 1 85.03 0 H8 H56 1306 A 1 HETATM 35 H H10A H56 . . . L 6 172.458 178.556 184.404 1 85.03 0 H10A H56 1306 A 1 HETATM 36 H H10B H56 . . . L 6 172.772 177.429 183.052 1 85.03 0 H10B H56 1306 A 1 HETATM 37 H H15 H56 . . . L 6 174.743 175.908 179.105 1 85.03 0 H15 H56 1306 A 1 HETATM 38 H H2 H56 . . . L 6 171.89 176.26 184.926 1 85.03 0 H2 H56 1306 A 1 HETATM 39 H H9 H56 . . . L 6 174.717 176.435 184.612 1 85.03 0 H9 H56 1306 A 1 HETATM 40 H H12 H56 . . . L 6 174.437 180.561 182.045 1 85.03 0 H12 H56 1306 A 1 HETATM 41 H H18 H56 . . . L 6 173.781 180.806 179.604 1 85.03 0 H18 H56 1306 A 1 HETATM 42 H H2O H56 . . . L 6 175.21 170.674 183.122 1 85.03 0 H2O H56 1306 A 1 HETATM 43 H H30 H56 . . . L 6 172.101 179.409 181.488 1 85.03 0 H30 H56 1306 A 1 HETATM 44 H H11B H56 . . . L 6 175.293 178.32 183.251 1 85.03 0 H11B H56 1306 A 1 HETATM 45 H H11A H56 . . . L 6 174.55 179.636 184.15 1 85.03 0 H11A H56 1306 A 1 HETATM 46 H H14 H56 . . . L 6 174.46 176.943 181.49 1 85.03 0 H14 H56 1306 A 1 HETATM 47 H H17 H56 . . . L 6 174.041 179.857 177.41 1 85.03 0 H17 H56 1306 A 1 HETATM 48 H H20 H56 . . . L 6 173.575 173.831 186.823 1 85.03 0 H20 H56 1306 A 1 HETATM 49 H H21 H56 . . . L 6 174.231 171.435 185.98 1 85.03 0 H21 H56 1306 A 1 HETATM 50 H H23 H56 . . . L 6 173.647 172.8 181.878 1 85.03 0 H23 H56 1306 A 1 HETATM 51 H H24 H56 . . . L 6 173.043 175.002 182.652 1 85.03 0 H24 H56 1306 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 51 #