data_7DH0
#
_model_server_result.job_id            7khCa7KBMfx7qdz5lGbRzg 
_model_server_result.datetime_utc      '2025-03-06 02:48:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7dh0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"JB","auth_seq_id":201}' 
#
_entry.id    7DH0 
#
_exptl.entry_id    7DH0 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              790.145 
_entity.id                          52 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7DH0 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DH0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    45-meric 
_pdbx_struct_assembly.oligomeric_count      45 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 52 IB N N 
? 52 JB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 O SG CYS 32 H CYS 33 1_555 O SG CYS 65 H CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 O SG CYS 42 H CYS 43 1_555 O SG CYS 55 H CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 W SG CYS 45 Q CYS 46 1_555 W SG CYS 55 Q CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 W SG CYS 87 Q CYS 88 1_555 W SG CYS 99 Q CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 Z SG CYS 17 T CYS 18 1_555 Z SG CYS 74 T CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 Z SG CYS 94 T CYS 95 1_555 Z SG CYS 114 T CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf7 JA SG CYS 58 d CYS 59 1_555 JA SG CYS 89 d CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf8 QA SG CYS 113 g CYS 113 1_555 QA SG CYS 125 g CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale1 I NH1 ARG 233 B ARG 266 1_555 CB O22 3PE . B 3PE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.277 ? 
metalc ? metalc1 G OG1 THR 105 9 THR 137 1_555 YA FE1 FES . 9 FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? 
metalc ? metalc2 H N CYS 55 A CYS 78 1_555 BB FE2 FES . A FES 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? 
metalc ? metalc3 L N CYS 80 E CYS 116 1_555 FB FE4 SF4 . E SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? 
metalc ? metalc4 L N CYS 119 E CYS 155 1_555 EB FE2 SF4 . E SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
metalc ? metalc5 P NE2 HIS 68 I HIS 96 1_555 GB ZN ZN . I ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc6 P SG CYS 87 I CYS 115 1_555 GB ZN ZN . I ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? 
#
_chem_comp.formula           'C44 H88 N O8 P' 
_chem_comp.formula_weight    790.145 
_chem_comp.id                PC1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-SN-PHOSPHATIDYLCHOLINE 
#
_atom_sites.entry_id                     7DH0 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
TA 45 3PE 2 1 401 401 3PE 3PE . 
UA 46 CDL 4 1 501 501 CDL CDL . 
VA 45 3PE 4 1 502 502 3PE 3PE . 
WA 47 FMN 8 1 501 501 FMN FMN . 
XA 48 SF4 8 1 502 502 SF4 SF4 . 
YA 49 FES 9 1 301 301 FES FES . 
ZA 48 SF4 A 1 801 801 SF4 SF4 . 
AB 48 SF4 A 1 802 802 SF4 SF4 . 
BB 49 FES A 1 803 803 FES FES . 
CB 45 3PE B 1 501 501 3PE 3PE . 
DB 48 SF4 D 1 301 301 SF4 SF4 . 
EB 48 SF4 E 1 301 301 SF4 SF4 . 
FB 48 SF4 E 1 302 302 SF4 SF4 . 
GB 50 ZN I 1 300 300 ZN ZN . 
HB 51 NAP R 1 601 601 NAP NAP . 
IB 52 PC1 S 1 401 401 PC1 PC1 . 
JB 52 PC1 j 1 201 201 PC1 PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 PC1 . . . JB 52 242.708 147.25 221.607 1 136.03 ? O12 PC1 201 j 1 
HETATM 2 P P PC1 . . . JB 52 242.078 146.465 220.482 1 136.03 ? P PC1 201 j 1 
HETATM 3 O O14 PC1 . . . JB 52 242.382 144.998 220.65 1 136.03 ? O14 PC1 201 j 1 
HETATM 4 O O13 PC1 . . . JB 52 242.635 146.994 219.031 1 136.03 ? O13 PC1 201 j 1 
HETATM 5 C C11 PC1 . . . JB 52 241.691 147.574 218.175 1 136.03 ? C11 PC1 201 j 1 
HETATM 6 C C12 PC1 . . . JB 52 241.629 149.083 218.418 1 136.03 ? C12 PC1 201 j 1 
HETATM 7 N N PC1 . . . JB 52 240.399 149.684 217.921 1 136.03 ? N PC1 201 j 1 
HETATM 8 C C13 PC1 . . . JB 52 239.25 149.188 218.657 1 136.03 ? C13 PC1 201 j 1 
HETATM 9 C C14 PC1 . . . JB 52 240.486 151.117 218.11 1 136.03 ? C14 PC1 201 j 1 
HETATM 10 C C15 PC1 . . . JB 52 240.222 149.428 216.503 1 136.03 ? C15 PC1 201 j 1 
HETATM 11 O O11 PC1 . . . JB 52 240.453 146.693 220.482 1 136.03 ? O11 PC1 201 j 1 
HETATM 12 C C1 PC1 . . . JB 52 239.765 146.558 221.684 1 136.03 ? C1 PC1 201 j 1 
HETATM 13 C C2 PC1 . . . JB 52 238.632 145.574 221.437 1 136.03 ? C2 PC1 201 j 1 
HETATM 14 O O21 PC1 . . . JB 52 239.069 144.592 220.545 1 136.03 ? O21 PC1 201 j 1 
HETATM 15 C C21 PC1 . . . JB 52 239.26 143.341 221.137 1 136.03 ? C21 PC1 201 j 1 
HETATM 16 O O22 PC1 . . . JB 52 240.354 142.908 221.25 1 136.03 ? O22 PC1 201 j 1 
HETATM 17 C C22 PC1 . . . JB 52 238.066 142.534 221.642 1 136.03 ? C22 PC1 201 j 1 
HETATM 18 C C23 PC1 . . . JB 52 238.205 142.299 223.147 1 136.03 ? C23 PC1 201 j 1 
HETATM 19 C C3 PC1 . . . JB 52 237.449 146.315 220.829 1 136.03 ? C3 PC1 201 j 1 
HETATM 20 O O31 PC1 . . . JB 52 236.364 146.214 221.703 1 136.03 ? O31 PC1 201 j 1 
HETATM 21 C C31 PC1 . . . JB 52 235.88 147.451 222.129 1 136.03 ? C31 PC1 201 j 1 
HETATM 22 O O32 PC1 . . . JB 52 236.623 148.362 222.261 1 136.03 ? O32 PC1 201 j 1 
HETATM 23 C C32 PC1 . . . JB 52 234.392 147.622 222.415 1 136.03 ? C32 PC1 201 j 1 
HETATM 24 C C33 PC1 . . . JB 52 233.65 147.858 221.101 1 136.03 ? C33 PC1 201 j 1 
HETATM 25 C C34 PC1 . . . JB 52 233.825 149.311 220.659 1 136.03 ? C34 PC1 201 j 1 
HETATM 26 C C35 PC1 . . . JB 52 233.453 149.459 219.183 1 136.03 ? C35 PC1 201 j 1 
HETATM 27 C C36 PC1 . . . JB 52 231.959 149.203 218.992 1 136.03 ? C36 PC1 201 j 1 
HETATM 28 C C37 PC1 . . . JB 52 231.737 148.398 217.712 1 136.03 ? C37 PC1 201 j 1 
HETATM 29 C C38 PC1 . . . JB 52 230.251 148.077 217.554 1 136.03 ? C38 PC1 201 j 1 
HETATM 30 C C39 PC1 . . . JB 52 230.054 147.027 216.46 1 136.03 ? C39 PC1 201 j 1 
HETATM 31 C C3A PC1 . . . JB 52 230.625 145.687 216.922 1 136.03 ? C3A PC1 201 j 1 
HETATM 32 C C3B PC1 . . . JB 52 229.969 144.554 216.137 1 136.03 ? C3B PC1 201 j 1 
HETATM 33 C C3C PC1 . . . JB 52 230.339 143.206 216.755 1 136.03 ? C3C PC1 201 j 1 
HETATM 34 C C3D PC1 . . . JB 52 231.745 142.791 216.322 1 136.03 ? C3D PC1 201 j 1 
HETATM 35 C C3E PC1 . . . JB 52 231.931 141.3 216.6 1 136.03 ? C3E PC1 201 j 1 
HETATM 36 C C3F PC1 . . . JB 52 233.26 140.814 216.025 1 136.03 ? C3F PC1 201 j 1 
HETATM 37 C C3G PC1 . . . JB 52 233.414 139.319 216.302 1 136.03 ? C3G PC1 201 j 1 
HETATM 38 C C3H PC1 . . . JB 52 234.69 138.803 215.641 1 136.03 ? C3H PC1 201 j 1 
HETATM 39 C C3I PC1 . . . JB 52 234.838 137.304 215.893 1 136.03 ? C3I PC1 201 j 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    70 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           39 
#