data_7DH0
#
_model_server_result.job_id            kcLAldS6ik9xIJO3ZnqY7g 
_model_server_result.datetime_utc      '2025-03-06 02:49:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7dh0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"IB","auth_seq_id":401}' 
#
_entry.id    7DH0 
#
_exptl.entry_id    7DH0 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              790.145 
_entity.id                          52 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7DH0 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DH0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    45-meric 
_pdbx_struct_assembly.oligomeric_count      45 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 52 IB N N 
? 52 JB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 O SG CYS 32 H CYS 33 1_555 O SG CYS 65 H CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 O SG CYS 42 H CYS 43 1_555 O SG CYS 55 H CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 W SG CYS 45 Q CYS 46 1_555 W SG CYS 55 Q CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 W SG CYS 87 Q CYS 88 1_555 W SG CYS 99 Q CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 Z SG CYS 17 T CYS 18 1_555 Z SG CYS 74 T CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 Z SG CYS 94 T CYS 95 1_555 Z SG CYS 114 T CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf7 JA SG CYS 58 d CYS 59 1_555 JA SG CYS 89 d CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf8 QA SG CYS 113 g CYS 113 1_555 QA SG CYS 125 g CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale1 I NH1 ARG 233 B ARG 266 1_555 CB O22 3PE . B 3PE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.277 ? 
metalc ? metalc1 G OG1 THR 105 9 THR 137 1_555 YA FE1 FES . 9 FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? 
metalc ? metalc2 H N CYS 55 A CYS 78 1_555 BB FE2 FES . A FES 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? 
metalc ? metalc3 L N CYS 80 E CYS 116 1_555 FB FE4 SF4 . E SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? 
metalc ? metalc4 L N CYS 119 E CYS 155 1_555 EB FE2 SF4 . E SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
metalc ? metalc5 P NE2 HIS 68 I HIS 96 1_555 GB ZN ZN . I ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc6 P SG CYS 87 I CYS 115 1_555 GB ZN ZN . I ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? 
#
_chem_comp.formula           'C44 H88 N O8 P' 
_chem_comp.formula_weight    790.145 
_chem_comp.id                PC1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-SN-PHOSPHATIDYLCHOLINE 
#
_atom_sites.entry_id                     7DH0 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
TA 45 3PE 2 1 401 401 3PE 3PE . 
UA 46 CDL 4 1 501 501 CDL CDL . 
VA 45 3PE 4 1 502 502 3PE 3PE . 
WA 47 FMN 8 1 501 501 FMN FMN . 
XA 48 SF4 8 1 502 502 SF4 SF4 . 
YA 49 FES 9 1 301 301 FES FES . 
ZA 48 SF4 A 1 801 801 SF4 SF4 . 
AB 48 SF4 A 1 802 802 SF4 SF4 . 
BB 49 FES A 1 803 803 FES FES . 
CB 45 3PE B 1 501 501 3PE 3PE . 
DB 48 SF4 D 1 301 301 SF4 SF4 . 
EB 48 SF4 E 1 301 301 SF4 SF4 . 
FB 48 SF4 E 1 302 302 SF4 SF4 . 
GB 50 ZN I 1 300 300 ZN ZN . 
HB 51 NAP R 1 601 601 NAP NAP . 
IB 52 PC1 S 1 401 401 PC1 PC1 . 
JB 52 PC1 j 1 201 201 PC1 PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 PC1 . . . IB 52 208.93 122.082 205.183 1 121.49 ? O12 PC1 401 S 1 
HETATM 2 P P PC1 . . . IB 52 207.979 121.704 206.293 1 121.49 ? P PC1 401 S 1 
HETATM 3 O O14 PC1 . . . IB 52 207.661 120.235 206.193 1 121.49 ? O14 PC1 401 S 1 
HETATM 4 O O13 PC1 . . . IB 52 206.578 122.563 206.177 1 121.49 ? O13 PC1 401 S 1 
HETATM 5 C C11 PC1 . . . IB 52 206.513 123.817 206.794 1 121.49 ? C11 PC1 401 S 1 
HETATM 6 C C12 PC1 . . . IB 52 205.887 124.825 205.826 1 121.49 ? C12 PC1 401 S 1 
HETATM 7 N N PC1 . . . IB 52 206.846 125.809 205.334 1 121.49 ? N PC1 401 S 1 
HETATM 8 C C13 PC1 . . . IB 52 207.41 126.564 206.442 1 121.49 ? C13 PC1 401 S 1 
HETATM 9 C C14 PC1 . . . IB 52 207.915 125.172 204.584 1 121.49 ? C14 PC1 401 S 1 
HETATM 10 C C15 PC1 . . . IB 52 206.163 126.722 204.433 1 121.49 ? C15 PC1 401 S 1 
HETATM 11 O O11 PC1 . . . IB 52 208.685 122.025 207.742 1 121.49 ? O11 PC1 401 S 1 
HETATM 12 C C1 PC1 . . . IB 52 208.414 121.164 208.81 1 121.49 ? C1 PC1 401 S 1 
HETATM 13 C C2 PC1 . . . IB 52 207.632 121.914 209.885 1 121.49 ? C2 PC1 401 S 1 
HETATM 14 O O21 PC1 . . . IB 52 208.478 122.204 210.961 1 121.49 ? O21 PC1 401 S 1 
HETATM 15 C C21 PC1 . . . IB 52 208.874 123.543 211.013 1 121.49 ? C21 PC1 401 S 1 
HETATM 16 O O22 PC1 . . . IB 52 208.057 124.39 211.138 1 121.49 ? O22 PC1 401 S 1 
HETATM 17 C C22 PC1 . . . IB 52 210.352 123.919 210.91 1 121.49 ? C22 PC1 401 S 1 
HETATM 18 C C23 PC1 . . . IB 52 210.799 123.937 209.447 1 121.49 ? C23 PC1 401 S 1 
HETATM 19 C C24 PC1 . . . IB 52 210.615 125.331 208.843 1 121.49 ? C24 PC1 401 S 1 
HETATM 20 C C25 PC1 . . . IB 52 210.882 125.309 207.336 1 121.49 ? C25 PC1 401 S 1 
HETATM 21 C C26 PC1 . . . IB 52 212.243 124.685 207.029 1 121.49 ? C26 PC1 401 S 1 
HETATM 22 C C27 PC1 . . . IB 52 213.357 125.695 207.304 1 121.49 ? C27 PC1 401 S 1 
HETATM 23 C C28 PC1 . . . IB 52 214.294 125.192 208.405 1 121.49 ? C28 PC1 401 S 1 
HETATM 24 C C29 PC1 . . . IB 52 214.812 123.788 208.088 1 121.49 ? C29 PC1 401 S 1 
HETATM 25 C C2A PC1 . . . IB 52 215.413 123.157 209.344 1 121.49 ? C2A PC1 401 S 1 
HETATM 26 C C2B PC1 . . . IB 52 216.794 123.751 209.605 1 121.49 ? C2B PC1 401 S 1 
HETATM 27 C C3 PC1 . . . IB 52 206.468 121.044 210.353 1 121.49 ? C3 PC1 401 S 1 
HETATM 28 O O31 PC1 . . . IB 52 205.721 120.637 209.24 1 121.49 ? O31 PC1 401 S 1 
HETATM 29 C C31 PC1 . . . IB 52 205.428 119.269 209.212 1 121.49 ? C31 PC1 401 S 1 
HETATM 30 O O32 PC1 . . . IB 52 205.287 118.668 210.223 1 121.49 ? O32 PC1 401 S 1 
HETATM 31 C C32 PC1 . . . IB 52 205.297 118.548 207.873 1 121.49 ? C32 PC1 401 S 1 
HETATM 32 C C33 PC1 . . . IB 52 206.016 117.199 207.943 1 121.49 ? C33 PC1 401 S 1 
HETATM 33 C C34 PC1 . . . IB 52 207.532 117.412 207.945 1 121.49 ? C34 PC1 401 S 1 
HETATM 34 C C35 PC1 . . . IB 52 208.229 116.291 207.17 1 121.49 ? C35 PC1 401 S 1 
HETATM 35 C C36 PC1 . . . IB 52 208.68 116.789 205.794 1 121.49 ? C36 PC1 401 S 1 
HETATM 36 C C37 PC1 . . . IB 52 209.857 117.753 205.944 1 121.49 ? C37 PC1 401 S 1 
HETATM 37 C C38 PC1 . . . IB 52 210.093 118.474 204.618 1 121.49 ? C38 PC1 401 S 1 
HETATM 38 C C39 PC1 . . . IB 52 211.434 119.205 204.666 1 121.49 ? C39 PC1 401 S 1 
HETATM 39 C C3A PC1 . . . IB 52 211.938 119.462 203.246 1 121.49 ? C3A PC1 401 S 1 
HETATM 40 C C3B PC1 . . . IB 52 213.416 119.859 203.278 1 121.49 ? C3B PC1 401 S 1 
HETATM 41 C C3C PC1 . . . IB 52 213.579 121.253 203.882 1 121.49 ? C3C PC1 401 S 1 
HETATM 42 C C3D PC1 . . . IB 52 215.063 121.571 204.049 1 121.49 ? C3D PC1 401 S 1 
HETATM 43 C C3E PC1 . . . IB 52 215.544 121.078 205.411 1 121.49 ? C3E PC1 401 S 1 
HETATM 44 C C3F PC1 . . . IB 52 217.032 121.394 205.545 1 121.49 ? C3F PC1 401 S 1 
HETATM 45 C C3G PC1 . . . IB 52 217.504 121.126 206.971 1 121.49 ? C3G PC1 401 S 1 
HETATM 46 C C3H PC1 . . . IB 52 218.973 121.526 207.091 1 121.49 ? C3H PC1 401 S 1 
HETATM 47 C C3I PC1 . . . IB 52 219.45 121.302 208.523 1 121.49 ? C3I PC1 401 S 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    78 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           47 
#