data_7DIN # _model_server_result.job_id Ic0zpcQVcGFFh1aANuflGA _model_server_result.datetime_utc '2024-10-10 08:22:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7din # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 7DIN # _exptl.entry_id 7DIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7DIN _cell.length_a 47.932 _cell.length_b 47.932 _cell.length_c 82.809 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 29 1_555 A SG CYS 32 A CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc1 A OE2 GLU 28 A GLU 28 1_555 E CO CO . A CO 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc2 A OD1 ASN 43 A ASN 43 1_555 F CO CO . A CO 205 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc3 A NE2 HIS 49 A HIS 49 1_555 D CO CO . A CO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc4 A OE1 GLU 51 A GLU 51 1_555 D CO CO . A CO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc5 D CO CO . A CO 203 1_555 G O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc6 D CO CO . A CO 203 1_555 G O HOH . A HOH 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc7 D CO CO . A CO 203 1_555 G O HOH . A HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc8 D CO CO . A CO 203 1_555 G O HOH . A HOH 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc9 F CO CO . A CO 205 1_555 G O HOH . A HOH 311 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc10 F CO CO . A CO 205 1_555 G O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DIN _atom_sites.fract_transf_matrix[1][1] 0.020863 _atom_sites.fract_transf_matrix[1][2] 0.012045 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02409 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012076 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPO A 1 201 201 MPO MPO . C 3 MPD A 1 202 202 MPD MPD . D 4 CO A 1 203 301 CO CO . E 4 CO A 1 204 302 CO CO . F 4 CO A 1 205 303 CO CO . G 5 HOH A 1 301 78 HOH HOH . G 5 HOH A 2 302 122 HOH HOH . G 5 HOH A 3 303 84 HOH HOH . G 5 HOH A 4 304 55 HOH HOH . G 5 HOH A 5 305 89 HOH HOH . G 5 HOH A 6 306 21 HOH HOH . G 5 HOH A 7 307 12 HOH HOH . G 5 HOH A 8 308 39 HOH HOH . G 5 HOH A 9 309 53 HOH HOH . G 5 HOH A 10 310 41 HOH HOH . G 5 HOH A 11 311 65 HOH HOH . G 5 HOH A 12 312 44 HOH HOH . G 5 HOH A 13 313 114 HOH HOH . G 5 HOH A 14 314 100 HOH HOH . G 5 HOH A 15 315 46 HOH HOH . G 5 HOH A 16 316 35 HOH HOH . G 5 HOH A 17 317 29 HOH HOH . G 5 HOH A 18 318 72 HOH HOH . G 5 HOH A 19 319 91 HOH HOH . G 5 HOH A 20 320 22 HOH HOH . G 5 HOH A 21 321 95 HOH HOH . G 5 HOH A 22 322 76 HOH HOH . G 5 HOH A 23 323 19 HOH HOH . G 5 HOH A 24 324 28 HOH HOH . G 5 HOH A 25 325 45 HOH HOH . G 5 HOH A 26 326 40 HOH HOH . G 5 HOH A 27 327 68 HOH HOH . G 5 HOH A 28 328 23 HOH HOH . G 5 HOH A 29 329 67 HOH HOH . G 5 HOH A 30 330 10 HOH HOH . G 5 HOH A 31 331 66 HOH HOH . G 5 HOH A 32 332 5 HOH HOH . G 5 HOH A 33 333 112 HOH HOH . G 5 HOH A 34 334 11 HOH HOH . G 5 HOH A 35 335 43 HOH HOH . G 5 HOH A 36 336 90 HOH HOH . G 5 HOH A 37 337 4 HOH HOH . G 5 HOH A 38 338 20 HOH HOH . G 5 HOH A 39 339 38 HOH HOH . G 5 HOH A 40 340 88 HOH HOH . G 5 HOH A 41 341 59 HOH HOH . G 5 HOH A 42 342 85 HOH HOH . G 5 HOH A 43 343 24 HOH HOH . G 5 HOH A 44 344 2 HOH HOH . G 5 HOH A 45 345 37 HOH HOH . G 5 HOH A 46 346 126 HOH HOH . G 5 HOH A 47 347 104 HOH HOH . G 5 HOH A 48 348 36 HOH HOH . G 5 HOH A 49 349 74 HOH HOH . G 5 HOH A 50 350 47 HOH HOH . G 5 HOH A 51 351 73 HOH HOH . G 5 HOH A 52 352 127 HOH HOH . G 5 HOH A 53 353 18 HOH HOH . G 5 HOH A 54 354 8 HOH HOH . G 5 HOH A 55 355 96 HOH HOH . G 5 HOH A 56 356 6 HOH HOH . G 5 HOH A 57 357 14 HOH HOH . G 5 HOH A 58 358 61 HOH HOH . G 5 HOH A 59 359 94 HOH HOH . G 5 HOH A 60 360 7 HOH HOH . G 5 HOH A 61 361 123 HOH HOH . G 5 HOH A 62 362 116 HOH HOH . G 5 HOH A 63 363 34 HOH HOH . G 5 HOH A 64 364 9 HOH HOH . G 5 HOH A 65 365 109 HOH HOH . G 5 HOH A 66 366 93 HOH HOH . G 5 HOH A 67 367 13 HOH HOH . G 5 HOH A 68 368 48 HOH HOH . G 5 HOH A 69 369 75 HOH HOH . G 5 HOH A 70 370 26 HOH HOH . G 5 HOH A 71 371 1 HOH HOH . G 5 HOH A 72 372 63 HOH HOH . G 5 HOH A 73 373 115 HOH HOH . G 5 HOH A 74 374 86 HOH HOH . G 5 HOH A 75 375 16 HOH HOH . G 5 HOH A 76 376 110 HOH HOH . G 5 HOH A 77 377 71 HOH HOH . G 5 HOH A 78 378 49 HOH HOH . G 5 HOH A 79 379 15 HOH HOH . G 5 HOH A 80 380 27 HOH HOH . G 5 HOH A 81 381 42 HOH HOH . G 5 HOH A 82 382 56 HOH HOH . G 5 HOH A 83 383 79 HOH HOH . G 5 HOH A 84 384 82 HOH HOH . G 5 HOH A 85 385 58 HOH HOH . G 5 HOH A 86 386 57 HOH HOH . G 5 HOH A 87 387 69 HOH HOH . G 5 HOH A 88 388 81 HOH HOH . G 5 HOH A 89 389 17 HOH HOH . G 5 HOH A 90 390 33 HOH HOH . G 5 HOH A 91 391 30 HOH HOH . G 5 HOH A 92 392 83 HOH HOH . G 5 HOH A 93 393 51 HOH HOH . G 5 HOH A 94 394 119 HOH HOH . G 5 HOH A 95 395 92 HOH HOH . G 5 HOH A 96 396 101 HOH HOH . G 5 HOH A 97 397 80 HOH HOH . G 5 HOH A 98 398 3 HOH HOH . G 5 HOH A 99 399 87 HOH HOH . G 5 HOH A 100 400 25 HOH HOH . G 5 HOH A 101 401 105 HOH HOH . G 5 HOH A 102 402 117 HOH HOH . G 5 HOH A 103 403 128 HOH HOH . G 5 HOH A 104 404 111 HOH HOH . G 5 HOH A 105 405 125 HOH HOH . G 5 HOH A 106 406 113 HOH HOH . G 5 HOH A 107 407 107 HOH HOH . G 5 HOH A 108 408 54 HOH HOH . G 5 HOH A 109 409 99 HOH HOH . G 5 HOH A 110 410 50 HOH HOH . G 5 HOH A 111 411 52 HOH HOH . G 5 HOH A 112 412 70 HOH HOH . G 5 HOH A 113 413 102 HOH HOH . G 5 HOH A 114 414 64 HOH HOH . G 5 HOH A 115 415 98 HOH HOH . G 5 HOH A 116 416 108 HOH HOH . G 5 HOH A 117 417 62 HOH HOH . G 5 HOH A 118 418 32 HOH HOH . G 5 HOH A 119 419 77 HOH HOH . G 5 HOH A 120 420 97 HOH HOH . G 5 HOH A 121 421 120 HOH HOH . G 5 HOH A 122 422 106 HOH HOH . G 5 HOH A 123 423 31 HOH HOH . G 5 HOH A 124 424 60 HOH HOH . G 5 HOH A 125 425 124 HOH HOH . G 5 HOH A 126 426 118 HOH HOH . G 5 HOH A 127 427 103 HOH HOH . G 5 HOH A 128 428 121 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 16.553 _atom_site.Cartn_y 1.065 _atom_site.Cartn_z 8.395 _atom_site.occupancy 0.47 _atom_site.B_iso_or_equiv 56.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 205 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #