data_7DIO # _model_server_result.job_id LWZ1LxVZtbJfLYGAoinlHQ _model_server_result.datetime_utc '2024-10-10 09:26:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dio # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7DIO # _exptl.entry_id 7DIO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.263 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3[N-MORPHOLINO]PROPANE SULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7DIO _cell.length_a 48.142 _cell.length_b 48.142 _cell.length_c 82.832 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DIO _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 29 1_555 A SG CYS 32 A CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc1 A NE2 HIS 49 A HIS 49 1_555 D FE FE . A FE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc2 A OE1 GLU 51 A GLU 51 1_555 D FE FE . A FE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc3 D FE FE . A FE 203 1_555 F O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc4 D FE FE . A FE 203 1_555 F O HOH . A HOH 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc5 D FE FE . A FE 203 1_555 F O HOH . A HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc6 D FE FE . A FE 203 1_555 F O HOH . A HOH 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc7 E FE FE . A FE 204 1_555 F O HOH . A HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? # _chem_comp.formula 'C7 H15 N O4 S' _chem_comp.formula_weight 209.263 _chem_comp.id MPO _chem_comp.mon_nstd_flag . _chem_comp.name '3[N-MORPHOLINO]PROPANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DIO _atom_sites.fract_transf_matrix[1][1] 0.020772 _atom_sites.fract_transf_matrix[1][2] 0.011993 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023985 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPO A 1 201 201 MPO MPO . C 3 MPD A 1 202 202 MPD MPD . D 4 FE A 1 203 301 FE FE . E 4 FE A 1 204 302 FE FE . F 5 HOH A 1 301 56 HOH HOH . F 5 HOH A 2 302 60 HOH HOH . F 5 HOH A 3 303 87 HOH HOH . F 5 HOH A 4 304 30 HOH HOH . F 5 HOH A 5 305 50 HOH HOH . F 5 HOH A 6 306 67 HOH HOH . F 5 HOH A 7 307 35 HOH HOH . F 5 HOH A 8 308 33 HOH HOH . F 5 HOH A 9 309 27 HOH HOH . F 5 HOH A 10 310 43 HOH HOH . F 5 HOH A 11 311 23 HOH HOH . F 5 HOH A 12 312 68 HOH HOH . F 5 HOH A 13 313 97 HOH HOH . F 5 HOH A 14 314 13 HOH HOH . F 5 HOH A 15 315 109 HOH HOH . F 5 HOH A 16 316 105 HOH HOH . F 5 HOH A 17 317 95 HOH HOH . F 5 HOH A 18 318 19 HOH HOH . F 5 HOH A 19 319 12 HOH HOH . F 5 HOH A 20 320 6 HOH HOH . F 5 HOH A 21 321 51 HOH HOH . F 5 HOH A 22 322 41 HOH HOH . F 5 HOH A 23 323 76 HOH HOH . F 5 HOH A 24 324 79 HOH HOH . F 5 HOH A 25 325 104 HOH HOH . F 5 HOH A 26 326 59 HOH HOH . F 5 HOH A 27 327 38 HOH HOH . F 5 HOH A 28 328 65 HOH HOH . F 5 HOH A 29 329 9 HOH HOH . F 5 HOH A 30 330 4 HOH HOH . F 5 HOH A 31 331 20 HOH HOH . F 5 HOH A 32 332 15 HOH HOH . F 5 HOH A 33 333 96 HOH HOH . F 5 HOH A 34 334 73 HOH HOH . F 5 HOH A 35 335 7 HOH HOH . F 5 HOH A 36 336 70 HOH HOH . F 5 HOH A 37 337 1 HOH HOH . F 5 HOH A 38 338 82 HOH HOH . F 5 HOH A 39 339 5 HOH HOH . F 5 HOH A 40 340 61 HOH HOH . F 5 HOH A 41 341 32 HOH HOH . F 5 HOH A 42 342 8 HOH HOH . F 5 HOH A 43 343 36 HOH HOH . F 5 HOH A 44 344 31 HOH HOH . F 5 HOH A 45 345 74 HOH HOH . F 5 HOH A 46 346 100 HOH HOH . F 5 HOH A 47 347 3 HOH HOH . F 5 HOH A 48 348 117 HOH HOH . F 5 HOH A 49 349 18 HOH HOH . F 5 HOH A 50 350 42 HOH HOH . F 5 HOH A 51 351 64 HOH HOH . F 5 HOH A 52 352 75 HOH HOH . F 5 HOH A 53 353 26 HOH HOH . F 5 HOH A 54 354 46 HOH HOH . F 5 HOH A 55 355 77 HOH HOH . F 5 HOH A 56 356 17 HOH HOH . F 5 HOH A 57 357 37 HOH HOH . F 5 HOH A 58 358 21 HOH HOH . F 5 HOH A 59 359 44 HOH HOH . F 5 HOH A 60 360 39 HOH HOH . F 5 HOH A 61 361 48 HOH HOH . F 5 HOH A 62 362 16 HOH HOH . F 5 HOH A 63 363 25 HOH HOH . F 5 HOH A 64 364 28 HOH HOH . F 5 HOH A 65 365 2 HOH HOH . F 5 HOH A 66 366 106 HOH HOH . F 5 HOH A 67 367 52 HOH HOH . F 5 HOH A 68 368 14 HOH HOH . F 5 HOH A 69 369 22 HOH HOH . F 5 HOH A 70 370 71 HOH HOH . F 5 HOH A 71 371 11 HOH HOH . F 5 HOH A 72 372 63 HOH HOH . F 5 HOH A 73 373 118 HOH HOH . F 5 HOH A 74 374 72 HOH HOH . F 5 HOH A 75 375 116 HOH HOH . F 5 HOH A 76 376 57 HOH HOH . F 5 HOH A 77 377 29 HOH HOH . F 5 HOH A 78 378 10 HOH HOH . F 5 HOH A 79 379 91 HOH HOH . F 5 HOH A 80 380 34 HOH HOH . F 5 HOH A 81 381 54 HOH HOH . F 5 HOH A 82 382 81 HOH HOH . F 5 HOH A 83 383 24 HOH HOH . F 5 HOH A 84 384 90 HOH HOH . F 5 HOH A 85 385 58 HOH HOH . F 5 HOH A 86 386 86 HOH HOH . F 5 HOH A 87 387 103 HOH HOH . F 5 HOH A 88 388 99 HOH HOH . F 5 HOH A 89 389 113 HOH HOH . F 5 HOH A 90 390 115 HOH HOH . F 5 HOH A 91 391 122 HOH HOH . F 5 HOH A 92 392 108 HOH HOH . F 5 HOH A 93 393 120 HOH HOH . F 5 HOH A 94 394 69 HOH HOH . F 5 HOH A 95 395 121 HOH HOH . F 5 HOH A 96 396 49 HOH HOH . F 5 HOH A 97 397 107 HOH HOH . F 5 HOH A 98 398 92 HOH HOH . F 5 HOH A 99 399 111 HOH HOH . F 5 HOH A 100 400 84 HOH HOH . F 5 HOH A 101 401 119 HOH HOH . F 5 HOH A 102 402 98 HOH HOH . F 5 HOH A 103 403 83 HOH HOH . F 5 HOH A 104 404 45 HOH HOH . F 5 HOH A 105 405 62 HOH HOH . F 5 HOH A 106 406 89 HOH HOH . F 5 HOH A 107 407 101 HOH HOH . F 5 HOH A 108 408 93 HOH HOH . F 5 HOH A 109 409 53 HOH HOH . F 5 HOH A 110 410 114 HOH HOH . F 5 HOH A 111 411 66 HOH HOH . F 5 HOH A 112 412 40 HOH HOH . F 5 HOH A 113 413 102 HOH HOH . F 5 HOH A 114 414 88 HOH HOH . F 5 HOH A 115 415 112 HOH HOH . F 5 HOH A 116 416 110 HOH HOH . F 5 HOH A 117 417 55 HOH HOH . F 5 HOH A 118 418 78 HOH HOH . F 5 HOH A 119 419 47 HOH HOH . F 5 HOH A 120 420 94 HOH HOH . F 5 HOH A 121 421 80 HOH HOH . F 5 HOH A 122 422 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 MPO . . . B 2 -27.67 2.396 -11.309 1 18.27 ? S1 MPO 201 A 1 HETATM 2 O O1 MPO . . . B 2 -26.476 1.87 -11.926 1 21.53 ? O1 MPO 201 A 1 HETATM 3 O O2 MPO . . . B 2 -28.394 3.278 -12.232 1 20.48 ? O2 MPO 201 A 1 HETATM 4 O O4 MPO . . . B 2 -29.06 -4.443 -14.658 1 21.27 ? O4 MPO 201 A 1 HETATM 5 N N1 MPO . . . B 2 -28.663 -2.238 -12.886 1 17.7 ? N1 MPO 201 A 1 HETATM 6 C C1 MPO . . . B 2 -28.74 1.023 -11.024 1 21.23 ? C1 MPO 201 A 1 HETATM 7 O O3 MPO . . . B 2 -27.444 3.031 -10.034 1 18.18 ? O3 MPO 201 A 1 HETATM 8 C C2 MPO . . . B 2 -28.886 0.149 -12.251 1 20.14 ? C2 MPO 201 A 1 HETATM 9 C C3 MPO . . . B 2 -29.148 -1.29 -11.878 1 19.42 ? C3 MPO 201 A 1 HETATM 10 C C4 MPO . . . B 2 -29.404 -2.098 -14.148 1 17.93 ? C4 MPO 201 A 1 HETATM 11 C C5 MPO . . . B 2 -28.915 -3.116 -15.149 1 18.96 ? C5 MPO 201 A 1 HETATM 12 C C6 MPO . . . B 2 -28.315 -4.584 -13.45 1 20.53 ? C6 MPO 201 A 1 HETATM 13 C C7 MPO . . . B 2 -28.783 -3.612 -12.397 1 21.5 ? C7 MPO 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #