data_7DL9 # _model_server_result.job_id BVD-age0EZ5vhrntREYg_A _model_server_result.datetime_utc '2024-10-19 12:22:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dl9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 7DL9 # _exptl.entry_id 7DL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 81.11 _cell.angle_beta 74.27 _cell.angle_gamma 84.02 _cell.entry_id 7DL9 _cell.length_a 42.874 _cell.length_b 68.715 _cell.length_c 79.027 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 237 n n C10 C9 OLC doub 238 n n C10 C11 OLC sing 239 n n C9 C8 OLC sing 240 n n C17 C16 OLC sing 241 z n C11 C12 OLC sing 242 n n C8 C7 OLC sing 243 n n C24 C22 OLC sing 244 n n C24 O25 OLC sing 245 n n C16 C15 OLC sing 246 n n C12 C13 OLC sing 247 n n C7 C6 OLC sing 248 n n C15 C14 OLC sing 249 n n C13 C14 OLC sing 250 n n C6 C5 OLC sing 251 n n C5 C4 OLC sing 252 n n C4 C3 OLC sing 253 n n C3 C2 OLC sing 254 n n C2 C1 OLC sing 255 n n C21 C22 OLC sing 256 n n C21 O20 OLC sing 257 n n C1 O19 OLC doub 258 n n C1 O20 OLC sing 259 n n C22 O23 OLC sing 260 n n C18 H18 OLC sing 261 n n C18 H18A OLC sing 262 n n C18 H18B OLC sing 263 n n C10 H10 OLC sing 264 n n C9 H9 OLC sing 265 n n C17 H17 OLC sing 266 n n C17 H17A OLC sing 267 n n C11 H11 OLC sing 268 n n C11 H11A OLC sing 269 n n C8 H8 OLC sing 270 n n C8 H8A OLC sing 271 n n C24 H24 OLC sing 272 n n C24 H24A OLC sing 273 n n C16 H16 OLC sing 274 n n C16 H16A OLC sing 275 n n C12 H12 OLC sing 276 n n C12 H12A OLC sing 277 n n C7 H7 OLC sing 278 n n C7 H7A OLC sing 279 n n C15 H15 OLC sing 280 n n C15 H15A OLC sing 281 n n C13 H13 OLC sing 282 n n C13 H13A OLC sing 283 n n C6 H6 OLC sing 284 n n C6 H6A OLC sing 285 n n C14 H14 OLC sing 286 n n C14 H14A OLC sing 287 n n C5 H5 OLC sing 288 n n C5 H5A OLC sing 289 n n C4 H4 OLC sing 290 n n C4 H4A OLC sing 291 n n C3 H3 OLC sing 292 n n C3 H3A OLC sing 293 n n C2 H2 OLC sing 294 n n C2 H2A OLC sing 295 n n C21 H21 OLC sing 296 n n C21 H21A OLC sing 297 n n C22 H22 OLC sing 298 n n O25 HO25 OLC sing 299 n n O23 HO23 OLC sing 300 n n # _atom_sites.entry_id 7DL9 _atom_sites.fract_transf_matrix[1][1] 0.023324 _atom_sites.fract_transf_matrix[1][2] -0.002444 _atom_sites.fract_transf_matrix[1][3] -0.006303 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014633 _atom_sites.fract_transf_matrix[2][3] -0.001947 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 OLC A 1 501 501 OLC OLC . D 2 OLC A 1 502 601 OLC OLC . E 3 HOH A 1 601 4 HOH HOH . E 3 HOH A 2 602 18 HOH HOH . E 3 HOH A 3 603 8 HOH HOH . E 3 HOH A 4 604 1 HOH HOH . E 3 HOH A 5 605 2 HOH HOH . E 3 HOH A 6 606 6 HOH HOH . E 3 HOH A 7 607 5 HOH HOH . E 3 HOH A 8 608 15 HOH HOH . E 3 HOH A 9 609 7 HOH HOH . E 3 HOH A 10 610 3 HOH HOH . E 3 HOH A 11 611 14 HOH HOH . F 3 HOH B 1 501 19 HOH HOH . F 3 HOH B 2 502 17 HOH HOH . F 3 HOH B 3 503 16 HOH HOH . F 3 HOH B 4 504 11 HOH HOH . F 3 HOH B 5 505 12 HOH HOH . F 3 HOH B 6 506 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . C 2 -17.668 34.466 -28.288 1 34.13 ? C18 OLC 501 A 1 HETATM 2 C C10 OLC . . . C 2 -9.886 34.176 -30.005 1 26.47 ? C10 OLC 501 A 1 HETATM 3 C C9 OLC . . . C 2 -9.254 35.257 -29.685 1 23.86 ? C9 OLC 501 A 1 HETATM 4 C C17 OLC . . . C 2 -16.434 35.332 -28.228 1 24.57 ? C17 OLC 501 A 1 HETATM 5 C C11 OLC . . . C 2 -10.673 33.357 -29.043 1 22.45 ? C11 OLC 501 A 1 HETATM 6 C C8 OLC . . . C 2 -9.216 35.848 -28.309 1 19.71 ? C8 OLC 501 A 1 HETATM 7 C C16 OLC . . . C 2 -15.43 34.87 -29.255 1 39.03 ? C16 OLC 501 A 1 HETATM 8 C C12 OLC . . . C 2 -12.126 33.642 -29.249 1 20.52 ? C12 OLC 501 A 1 HETATM 9 C C7 OLC . . . C 2 -8.158 36.913 -28.369 1 26.14 ? C7 OLC 501 A 1 HETATM 10 C C15 OLC . . . C 2 -14.716 33.619 -28.765 1 27.82 ? C15 OLC 501 A 1 HETATM 11 C C13 OLC . . . C 2 -12.825 32.408 -29.694 1 31.44 ? C13 OLC 501 A 1 HETATM 12 C C6 OLC . . . C 2 -8.234 37.644 -27.068 1 31.46 ? C6 OLC 501 A 1 HETATM 13 C C14 OLC . . . C 2 -14.271 32.722 -29.899 1 23.21 ? C14 OLC 501 A 1 HETATM 14 C C5 OLC . . . C 2 -7.182 38.703 -26.857 1 20.01 ? C5 OLC 501 A 1 HETATM 15 C C4 OLC . . . C 2 -7.26 39.018 -25.393 1 24.95 ? C4 OLC 501 A 1 HETATM 16 C C3 OLC . . . C 2 -6.19 39.996 -25.052 1 27.54 ? C3 OLC 501 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #