data_7DMZ
#
_model_server_result.job_id            XuZMmEvl3aww3m0IQ47dTw 
_model_server_result.datetime_utc      '2024-11-29 17:09:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7dmz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":501}' 
#
_entry.id    7DMZ 
#
_exptl.entry_id    7DMZ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              678.721 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'taccalonolide AJ' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7DMZ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DMZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 L N N 
? 5 N N N 
? 5 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 H O2G GTP . A GTP 501 1_555 I MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc2 H O3G GTP . A GTP 501 1_555 I MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc3 H O1B GTP . A GTP 501 1_555 I MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc4 J O2G GTP . B GTP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc5 J O3G GTP . B GTP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? 
metalc ? metalc6 J O3B GTP . B GTP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc7 J O1B GTP . B GTP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
#
_chem_comp.formula           'C34 H46 O14' 
_chem_comp.formula_weight    678.721 
_chem_comp.id                TAJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'taccalonolide AJ' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CBP CBD TAJ sing 390 n n 
OBV CBE TAJ sing 391 n n 
OBJ CBI TAJ sing 392 n n 
OBJ CBE TAJ sing 393 n n 
OBS CBI TAJ doub 394 n n 
CBI CBH TAJ sing 395 n n 
CBE CBD TAJ sing 396 n n 
CBE CBF TAJ sing 397 n n 
CBD CBH TAJ sing 398 n n 
CBD CBB TAJ sing 399 n n 
OBQ CBH TAJ sing 400 n n 
CBH CBL TAJ sing 401 n n 
CBF CBG TAJ sing 402 n n 
CBB CBA TAJ sing 403 n n 
CBB CBC TAJ sing 404 n n 
OBT CBA TAJ sing 405 n n 
CBA CAW TAJ sing 406 n n 
CBG CBC TAJ sing 407 n n 
CBG CBM TAJ sing 408 n n 
CBC CAX TAJ sing 409 n n 
CBR CAX TAJ sing 410 n n 
OBO CAT TAJ sing 411 n n 
CAW CAX TAJ sing 412 n n 
CAW CAU TAJ sing 413 n n 
CAX CAY TAJ sing 414 n n 
CAT CAU TAJ sing 415 n n 
CAT CAS TAJ sing 416 n n 
CAU CAV TAJ sing 417 n n 
OBU CAS TAJ doub 418 n n 
CAY OAC TAJ sing 419 n n 
CAY CAZ TAJ sing 420 n n 
CAS CAM TAJ sing 421 n n 
OAC CAK TAJ sing 422 n n 
CAV CAZ TAJ sing 423 n n 
CAV CAQ TAJ sing 424 n n 
CAZ OAD TAJ sing 425 n n 
CAP CAL TAJ sing 426 n n 
CAK CAO TAJ sing 427 n n 
CAK OAG TAJ doub 428 n n 
CBN CAQ TAJ sing 429 n n 
CAM CAQ TAJ sing 430 n n 
CAM CAI TAJ sing 431 n n 
CAQ CAR TAJ sing 432 n n 
OAD CAL TAJ sing 433 n n 
CAI CAE TAJ sing 434 n n 
CAL OAH TAJ doub 435 n n 
CAR OAB TAJ sing 436 n n 
CAR CAA TAJ sing 437 n n 
OAB CAJ TAJ sing 438 n n 
CAE CAA TAJ sing 439 n n 
CAE OBK TAJ sing 440 n n 
CAA OBK TAJ sing 441 n n 
CAJ OAF TAJ doub 442 n n 
CAJ CAN TAJ sing 443 n n 
CAP H1 TAJ sing 444 n n 
CAP H2 TAJ sing 445 n n 
CAP H3 TAJ sing 446 n n 
CAZ H4 TAJ sing 447 n n 
CAY H5 TAJ sing 448 n n 
CAO H6 TAJ sing 449 n n 
CAO H7 TAJ sing 450 n n 
CAO H8 TAJ sing 451 n n 
CAV H9 TAJ sing 452 n n 
CBN H10 TAJ sing 453 n n 
CBN H11 TAJ sing 454 n n 
CBN H12 TAJ sing 455 n n 
CAR H13 TAJ sing 456 n n 
CAN H14 TAJ sing 457 n n 
CAN H15 TAJ sing 458 n n 
CAN H16 TAJ sing 459 n n 
CAA H17 TAJ sing 460 n n 
CAE H18 TAJ sing 461 n n 
CAI H19 TAJ sing 462 n n 
CAI H20 TAJ sing 463 n n 
CAM H21 TAJ sing 464 n n 
CAT H22 TAJ sing 465 n n 
OBO H23 TAJ sing 466 n n 
CAU H24 TAJ sing 467 n n 
CAW H25 TAJ sing 468 n n 
CBR H26 TAJ sing 469 n n 
CBR H27 TAJ sing 470 n n 
CBR H28 TAJ sing 471 n n 
CBA H29 TAJ sing 472 n n 
OBT H30 TAJ sing 473 n n 
CBB H31 TAJ sing 474 n n 
CBC H32 TAJ sing 475 n n 
CBP H33 TAJ sing 476 n n 
CBP H34 TAJ sing 477 n n 
CBP H35 TAJ sing 478 n n 
OBQ H36 TAJ sing 479 n n 
CBL H37 TAJ sing 480 n n 
CBL H38 TAJ sing 481 n n 
CBL H39 TAJ sing 482 n n 
OBV H40 TAJ sing 483 n n 
CBF H41 TAJ sing 484 n n 
CBF H42 TAJ sing 485 n n 
CBG H43 TAJ sing 486 n n 
CBM H44 TAJ sing 487 n n 
CBM H45 TAJ sing 488 n n 
CBM H46 TAJ sing 489 n n 
#
_atom_sites.entry_id                     7DMZ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 GTP D 1 501 501 GTP GTP . 
H 3 GTP A 1 501 501 GTP GTP . 
I 4 MG A 1 502 502 MG MG . 
J 3 GTP B 1 501 501 GTP GTP . 
K 4 MG B 1 502 502 MG MG . 
L 5 TAJ E 1 501 501 TAJ TAJ . 
M 6 G2P E 1 502 501 G2P G2P . 
N 5 TAJ C 1 501 501 TAJ TAJ . 
O 6 G2P C 1 502 501 G2P G2P . 
P 5 TAJ F 1 501 501 TAJ TAJ . 
Q 6 G2P F 1 502 501 G2P G2P . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAH TAJ . . . L 5 73.12 76.293 108.482 1 70.98 ? OAH TAJ 501 E 1 
HETATM 2 C CAL TAJ . . . L 5 73.918 76.605 107.648 1 70.98 ? CAL TAJ 501 E 1 
HETATM 3 C CAP TAJ . . . L 5 73.8 77.766 106.722 1 70.98 ? CAP TAJ 501 E 1 
HETATM 4 O OAD TAJ . . . L 5 75.078 75.92 107.428 1 70.98 ? OAD TAJ 501 E 1 
HETATM 5 C CAZ TAJ . . . L 5 76.353 76.271 108.07 1 70.98 ? CAZ TAJ 501 E 1 
HETATM 6 C CAY TAJ . . . L 5 76.333 77.205 109.274 1 70.98 ? CAY TAJ 501 E 1 
HETATM 7 O OAC TAJ . . . L 5 76.481 78.567 108.807 1 70.98 ? OAC TAJ 501 E 1 
HETATM 8 C CAK TAJ . . . L 5 75.346 79.271 108.587 1 70.98 ? CAK TAJ 501 E 1 
HETATM 9 O OAG TAJ . . . L 5 75.261 80.141 107.772 1 70.98 ? OAG TAJ 501 E 1 
HETATM 10 C CAO TAJ . . . L 5 74.246 78.805 109.477 1 70.98 ? CAO TAJ 501 E 1 
HETATM 11 C CAV TAJ . . . L 5 77.563 76.476 107.147 1 70.98 ? CAV TAJ 501 E 1 
HETATM 12 C CAQ TAJ . . . L 5 77.601 75.649 105.833 1 70.98 ? CAQ TAJ 501 E 1 
HETATM 13 C CBN TAJ . . . L 5 77.735 74.142 106.12 1 70.98 ? CBN TAJ 501 E 1 
HETATM 14 C CAR TAJ . . . L 5 76.288 75.869 105.038 1 70.98 ? CAR TAJ 501 E 1 
HETATM 15 O OAB TAJ . . . L 5 76.138 77.298 104.829 1 70.98 ? OAB TAJ 501 E 1 
HETATM 16 C CAJ TAJ . . . L 5 75.179 77.734 103.975 1 70.98 ? CAJ TAJ 501 E 1 
HETATM 17 C CAN TAJ . . . L 5 75.759 78.644 102.949 1 70.98 ? CAN TAJ 501 E 1 
HETATM 18 O OAF TAJ . . . L 5 74.03 77.414 104.054 1 70.98 ? OAF TAJ 501 E 1 
HETATM 19 C CAA TAJ . . . L 5 76.319 75.186 103.696 1 70.98 ? CAA TAJ 501 E 1 
HETATM 20 O OBK TAJ . . . L 5 76.698 76.005 102.566 1 70.98 ? OBK TAJ 501 E 1 
HETATM 21 C CAE TAJ . . . L 5 77.605 74.981 103.026 1 70.98 ? CAE TAJ 501 E 1 
HETATM 22 C CAI TAJ . . . L 5 78.893 75.471 103.606 1 70.98 ? CAI TAJ 501 E 1 
HETATM 23 C CAM TAJ . . . L 5 78.799 76.156 104.971 1 70.98 ? CAM TAJ 501 E 1 
HETATM 24 C CAS TAJ . . . L 5 80.088 76.065 105.752 1 70.98 ? CAS TAJ 501 E 1 
HETATM 25 O OBU TAJ . . . L 5 81.073 75.505 105.319 1 70.98 ? OBU TAJ 501 E 1 
HETATM 26 C CAT TAJ . . . L 5 80.094 76.717 107.124 1 70.98 ? CAT TAJ 501 E 1 
HETATM 27 O OBO TAJ . . . L 5 81.313 76.453 107.82 1 70.98 ? OBO TAJ 501 E 1 
HETATM 28 C CAU TAJ . . . L 5 78.875 76.326 107.95 1 70.98 ? CAU TAJ 501 E 1 
HETATM 29 C CAW TAJ . . . L 5 78.786 77.153 109.225 1 70.98 ? CAW TAJ 501 E 1 
HETATM 30 C CAX TAJ . . . L 5 77.567 76.823 110.098 1 70.98 ? CAX TAJ 501 E 1 
HETATM 31 C CBR TAJ . . . L 5 77.485 75.332 110.47 1 70.98 ? CBR TAJ 501 E 1 
HETATM 32 C CBA TAJ . . . L 5 79.953 77.202 110.22 1 70.98 ? CBA TAJ 501 E 1 
HETATM 33 O OBT TAJ . . . L 5 80.794 78.318 109.969 1 70.98 ? OBT TAJ 501 E 1 
HETATM 34 C CBB TAJ . . . L 5 79.314 77.275 111.615 1 70.98 ? CBB TAJ 501 E 1 
HETATM 35 C CBC TAJ . . . L 5 77.886 77.728 111.315 1 70.98 ? CBC TAJ 501 E 1 
HETATM 36 C CBD TAJ . . . L 5 79.98 78.222 112.637 1 70.98 ? CBD TAJ 501 E 1 
HETATM 37 C CBP TAJ . . . L 5 81.36 77.697 113.058 1 70.98 ? CBP TAJ 501 E 1 
HETATM 38 C CBH TAJ . . . L 5 80.14 79.702 112.196 1 70.98 ? CBH TAJ 501 E 1 
HETATM 39 O OBQ TAJ . . . L 5 81.448 79.945 111.681 1 70.98 ? OBQ TAJ 501 E 1 
HETATM 40 C CBL TAJ . . . L 5 79.125 80.29 111.231 1 70.98 ? CBL TAJ 501 E 1 
HETATM 41 C CBI TAJ . . . L 5 80.094 80.413 113.546 1 70.98 ? CBI TAJ 501 E 1 
HETATM 42 O OBS TAJ . . . L 5 80.461 81.526 113.798 1 70.98 ? OBS TAJ 501 E 1 
HETATM 43 O OBJ TAJ . . . L 5 79.566 79.614 114.493 1 70.98 ? OBJ TAJ 501 E 1 
HETATM 44 C CBE TAJ . . . L 5 79.059 78.394 113.875 1 70.98 ? CBE TAJ 501 E 1 
HETATM 45 O OBV TAJ . . . L 5 79.234 77.338 114.767 1 70.98 ? OBV TAJ 501 E 1 
HETATM 46 C CBF TAJ . . . L 5 77.58 78.569 113.595 1 70.98 ? CBF TAJ 501 E 1 
HETATM 47 C CBG TAJ . . . L 5 77.046 77.562 112.577 1 70.98 ? CBG TAJ 501 E 1 
HETATM 48 C CBM TAJ . . . L 5 75.552 77.749 112.329 1 70.98 ? CBM TAJ 501 E 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    54 
_model_server_stats.query_time_ms           481 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           48 
#