data_7DN8 # _model_server_result.job_id 6sJDpoAnphxkap1XkeEfNA _model_server_result.datetime_utc '2024-11-16 10:10:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dn8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":202}' # _entry.id 7DN8 # _exptl.entry_id 7DN8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.88 _cell.angle_gamma 90 _cell.entry_id 7DN8 _cell.length_a 104.737 _cell.length_b 104.902 _cell.length_c 105.603 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DN8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,Q,R 1 1 C,D,K,L,S,T 2 1 E,F,M,N,U,V 3 1 G,H,O,P,W,X 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 L N N ? 4 N N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OG1 THR 19 D THR 31 1_555 I MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc2 B OG1 THR 36 D THR 48 1_555 I MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc3 I MG MG . D MG 201 1_555 J O2B GDP . D GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc4 I MG MG . D MG 201 1_555 R O HOH . D HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc5 I MG MG . D MG 201 1_555 R O HOH . D HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc6 I MG MG . D MG 201 1_555 R O HOH . D HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc7 D OG1 THR 19 B THR 31 1_555 K MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc8 D OG1 THR 36 B THR 48 1_555 K MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc9 K MG MG . B MG 201 1_555 L O3B GDP . B GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc10 K MG MG . B MG 201 1_555 T O HOH . B HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc11 K MG MG . B MG 201 1_555 T O HOH . B HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc12 F OG1 THR 19 F THR 31 1_555 M MG MG . F MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc13 F OG1 THR 36 F THR 48 1_555 M MG MG . F MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc14 M MG MG . F MG 201 1_555 N O2B GDP . F GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc15 M MG MG . F MG 201 1_555 V O HOH . F HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc16 M MG MG . F MG 201 1_555 V O HOH . F HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc17 M MG MG . F MG 201 1_555 V O HOH . F HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc18 H OG1 THR 19 H THR 31 1_555 O MG MG . H MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc19 H OG1 THR 36 H THR 48 1_555 O MG MG . H MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc20 O MG MG . H MG 201 1_555 P O3B GDP . H GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc21 O MG MG . H MG 201 1_555 X O HOH . H HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc22 O MG MG . H MG 201 1_555 X O HOH . H HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc23 O MG MG . H MG 201 1_555 X O HOH . H HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 7DN8 _atom_sites.fract_transf_matrix[1][1] 0.009548 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002537 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009798 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 MG D 1 201 182 MG MG . J 4 GDP D 1 202 183 GDP GDP . K 3 MG B 1 201 182 MG MG . L 4 GDP B 1 202 183 GDP GDP . M 3 MG F 1 201 182 MG MG . N 4 GDP F 1 202 183 GDP GDP . O 3 MG H 1 201 182 MG MG . P 4 GDP H 1 202 183 GDP GDP . Q 5 HOH C 1 401 315 HOH HOH . Q 5 HOH C 2 402 317 HOH HOH . Q 5 HOH C 3 403 17 HOH HOH . Q 5 HOH C 4 404 34 HOH HOH . Q 5 HOH C 5 405 343 HOH HOH . Q 5 HOH C 6 406 22 HOH HOH . Q 5 HOH C 7 407 133 HOH HOH . Q 5 HOH C 8 408 349 HOH HOH . Q 5 HOH C 9 409 37 HOH HOH . Q 5 HOH C 10 410 60 HOH HOH . Q 5 HOH C 11 411 57 HOH HOH . Q 5 HOH C 12 412 134 HOH HOH . Q 5 HOH C 13 413 161 HOH HOH . Q 5 HOH C 14 414 50 HOH HOH . Q 5 HOH C 15 415 25 HOH HOH . Q 5 HOH C 16 416 47 HOH HOH . Q 5 HOH C 17 417 208 HOH HOH . Q 5 HOH C 18 418 358 HOH HOH . Q 5 HOH C 19 419 277 HOH HOH . Q 5 HOH C 20 420 162 HOH HOH . Q 5 HOH C 21 421 164 HOH HOH . Q 5 HOH C 22 422 367 HOH HOH . Q 5 HOH C 23 423 227 HOH HOH . Q 5 HOH C 24 424 29 HOH HOH . Q 5 HOH C 25 425 62 HOH HOH . Q 5 HOH C 26 426 108 HOH HOH . Q 5 HOH C 27 427 67 HOH HOH . Q 5 HOH C 28 428 357 HOH HOH . Q 5 HOH C 29 429 312 HOH HOH . Q 5 HOH C 30 430 472 HOH HOH . Q 5 HOH C 31 431 253 HOH HOH . Q 5 HOH C 32 432 385 HOH HOH . Q 5 HOH C 33 433 115 HOH HOH . Q 5 HOH C 34 434 307 HOH HOH . Q 5 HOH C 35 435 382 HOH HOH . Q 5 HOH C 36 436 288 HOH HOH . Q 5 HOH C 37 437 412 HOH HOH . Q 5 HOH C 38 438 359 HOH HOH . Q 5 HOH C 39 439 78 HOH HOH . Q 5 HOH C 40 440 342 HOH HOH . Q 5 HOH C 41 441 341 HOH HOH . Q 5 HOH C 42 442 440 HOH HOH . Q 5 HOH C 43 443 200 HOH HOH . Q 5 HOH C 44 444 245 HOH HOH . Q 5 HOH C 45 445 275 HOH HOH . Q 5 HOH C 46 446 150 HOH HOH . Q 5 HOH C 47 447 365 HOH HOH . R 5 HOH D 1 301 49 HOH HOH . R 5 HOH D 2 302 225 HOH HOH . R 5 HOH D 3 303 193 HOH HOH . R 5 HOH D 4 304 2 HOH HOH . R 5 HOH D 5 305 204 HOH HOH . R 5 HOH D 6 306 33 HOH HOH . R 5 HOH D 7 307 1 HOH HOH . R 5 HOH D 8 308 93 HOH HOH . R 5 HOH D 9 309 199 HOH HOH . R 5 HOH D 10 310 53 HOH HOH . R 5 HOH D 11 311 348 HOH HOH . R 5 HOH D 12 312 190 HOH HOH . R 5 HOH D 13 313 316 HOH HOH . R 5 HOH D 14 314 127 HOH HOH . R 5 HOH D 15 315 361 HOH HOH . R 5 HOH D 16 316 86 HOH HOH . R 5 HOH D 17 317 122 HOH HOH . R 5 HOH D 18 318 103 HOH HOH . R 5 HOH D 19 319 3 HOH HOH . R 5 HOH D 20 320 97 HOH HOH . R 5 HOH D 21 321 439 HOH HOH . R 5 HOH D 22 322 140 HOH HOH . R 5 HOH D 23 323 146 HOH HOH . R 5 HOH D 24 324 76 HOH HOH . R 5 HOH D 25 325 242 HOH HOH . R 5 HOH D 26 326 92 HOH HOH . R 5 HOH D 27 327 266 HOH HOH . R 5 HOH D 28 328 124 HOH HOH . R 5 HOH D 29 329 171 HOH HOH . R 5 HOH D 30 330 330 HOH HOH . R 5 HOH D 31 331 287 HOH HOH . R 5 HOH D 32 332 234 HOH HOH . R 5 HOH D 33 333 279 HOH HOH . R 5 HOH D 34 334 82 HOH HOH . R 5 HOH D 35 335 183 HOH HOH . R 5 HOH D 36 336 259 HOH HOH . R 5 HOH D 37 337 145 HOH HOH . R 5 HOH D 38 338 298 HOH HOH . R 5 HOH D 39 339 438 HOH HOH . R 5 HOH D 40 340 462 HOH HOH . R 5 HOH D 41 341 396 HOH HOH . R 5 HOH D 42 342 289 HOH HOH . R 5 HOH D 43 343 432 HOH HOH . R 5 HOH D 44 344 445 HOH HOH . R 5 HOH D 45 345 158 HOH HOH . R 5 HOH D 46 346 444 HOH HOH . R 5 HOH D 47 347 185 HOH HOH . R 5 HOH D 48 348 213 HOH HOH . R 5 HOH D 49 349 433 HOH HOH . S 5 HOH A 1 401 176 HOH HOH . S 5 HOH A 2 402 320 HOH HOH . S 5 HOH A 3 403 172 HOH HOH . S 5 HOH A 4 404 13 HOH HOH . S 5 HOH A 5 405 143 HOH HOH . S 5 HOH A 6 406 16 HOH HOH . S 5 HOH A 7 407 305 HOH HOH . S 5 HOH A 8 408 346 HOH HOH . S 5 HOH A 9 409 203 HOH HOH . S 5 HOH A 10 410 191 HOH HOH . S 5 HOH A 11 411 194 HOH HOH . S 5 HOH A 12 412 291 HOH HOH . S 5 HOH A 13 413 112 HOH HOH . S 5 HOH A 14 414 42 HOH HOH . S 5 HOH A 15 415 236 HOH HOH . S 5 HOH A 16 416 87 HOH HOH . S 5 HOH A 17 417 39 HOH HOH . S 5 HOH A 18 418 394 HOH HOH . S 5 HOH A 19 419 230 HOH HOH . S 5 HOH A 20 420 318 HOH HOH . S 5 HOH A 21 421 130 HOH HOH . S 5 HOH A 22 422 290 HOH HOH . S 5 HOH A 23 423 351 HOH HOH . S 5 HOH A 24 424 141 HOH HOH . S 5 HOH A 25 425 352 HOH HOH . S 5 HOH A 26 426 110 HOH HOH . S 5 HOH A 27 427 168 HOH HOH . S 5 HOH A 28 428 467 HOH HOH . S 5 HOH A 29 429 295 HOH HOH . S 5 HOH A 30 430 401 HOH HOH . S 5 HOH A 31 431 366 HOH HOH . S 5 HOH A 32 432 397 HOH HOH . S 5 HOH A 33 433 210 HOH HOH . S 5 HOH A 34 434 301 HOH HOH . S 5 HOH A 35 435 459 HOH HOH . S 5 HOH A 36 436 169 HOH HOH . S 5 HOH A 37 437 263 HOH HOH . S 5 HOH A 38 438 400 HOH HOH . T 5 HOH B 1 301 77 HOH HOH . T 5 HOH B 2 302 5 HOH HOH . T 5 HOH B 3 303 106 HOH HOH . T 5 HOH B 4 304 377 HOH HOH . T 5 HOH B 5 305 262 HOH HOH . T 5 HOH B 6 306 384 HOH HOH . T 5 HOH B 7 307 229 HOH HOH . T 5 HOH B 8 308 99 HOH HOH . T 5 HOH B 9 309 98 HOH HOH . T 5 HOH B 10 310 20 HOH HOH . T 5 HOH B 11 311 123 HOH HOH . T 5 HOH B 12 312 32 HOH HOH . T 5 HOH B 13 313 268 HOH HOH . T 5 HOH B 14 314 368 HOH HOH . T 5 HOH B 15 315 347 HOH HOH . T 5 HOH B 16 316 323 HOH HOH . T 5 HOH B 17 317 46 HOH HOH . T 5 HOH B 18 318 4 HOH HOH . T 5 HOH B 19 319 415 HOH HOH . T 5 HOH B 20 320 44 HOH HOH . T 5 HOH B 21 321 182 HOH HOH . T 5 HOH B 22 322 409 HOH HOH . T 5 HOH B 23 323 52 HOH HOH . T 5 HOH B 24 324 296 HOH HOH . T 5 HOH B 25 325 157 HOH HOH . T 5 HOH B 26 326 297 HOH HOH . T 5 HOH B 27 327 216 HOH HOH . T 5 HOH B 28 328 55 HOH HOH . T 5 HOH B 29 329 23 HOH HOH . T 5 HOH B 30 330 120 HOH HOH . T 5 HOH B 31 331 84 HOH HOH . T 5 HOH B 32 332 135 HOH HOH . T 5 HOH B 33 333 232 HOH HOH . T 5 HOH B 34 334 117 HOH HOH . T 5 HOH B 35 335 118 HOH HOH . T 5 HOH B 36 336 355 HOH HOH . T 5 HOH B 37 337 261 HOH HOH . T 5 HOH B 38 338 324 HOH HOH . T 5 HOH B 39 339 214 HOH HOH . T 5 HOH B 40 340 51 HOH HOH . T 5 HOH B 41 341 113 HOH HOH . T 5 HOH B 42 342 188 HOH HOH . T 5 HOH B 43 343 424 HOH HOH . T 5 HOH B 44 344 437 HOH HOH . T 5 HOH B 45 345 418 HOH HOH . T 5 HOH B 46 346 285 HOH HOH . T 5 HOH B 47 347 356 HOH HOH . T 5 HOH B 48 348 416 HOH HOH . T 5 HOH B 49 349 414 HOH HOH . T 5 HOH B 50 350 281 HOH HOH . T 5 HOH B 51 351 425 HOH HOH . T 5 HOH B 52 352 447 HOH HOH . T 5 HOH B 53 353 436 HOH HOH . T 5 HOH B 54 354 423 HOH HOH . T 5 HOH B 55 355 413 HOH HOH . T 5 HOH B 56 356 369 HOH HOH . T 5 HOH B 57 357 160 HOH HOH . T 5 HOH B 58 358 422 HOH HOH . T 5 HOH B 59 359 306 HOH HOH . T 5 HOH B 60 360 344 HOH HOH . U 5 HOH E 1 401 155 HOH HOH . U 5 HOH E 2 402 311 HOH HOH . U 5 HOH E 3 403 322 HOH HOH . U 5 HOH E 4 404 14 HOH HOH . U 5 HOH E 5 405 222 HOH HOH . U 5 HOH E 6 406 395 HOH HOH . U 5 HOH E 7 407 302 HOH HOH . U 5 HOH E 8 408 70 HOH HOH . U 5 HOH E 9 409 75 HOH HOH . U 5 HOH E 10 410 102 HOH HOH . U 5 HOH E 11 411 154 HOH HOH . U 5 HOH E 12 412 325 HOH HOH . U 5 HOH E 13 413 79 HOH HOH . U 5 HOH E 14 414 71 HOH HOH . U 5 HOH E 15 415 43 HOH HOH . U 5 HOH E 16 416 63 HOH HOH . U 5 HOH E 17 417 257 HOH HOH . U 5 HOH E 18 418 91 HOH HOH . U 5 HOH E 19 419 217 HOH HOH . U 5 HOH E 20 420 48 HOH HOH . U 5 HOH E 21 421 28 HOH HOH . U 5 HOH E 22 422 107 HOH HOH . U 5 HOH E 23 423 207 HOH HOH . U 5 HOH E 24 424 65 HOH HOH . U 5 HOH E 25 425 80 HOH HOH . U 5 HOH E 26 426 256 HOH HOH . U 5 HOH E 27 427 40 HOH HOH . U 5 HOH E 28 428 38 HOH HOH . U 5 HOH E 29 429 239 HOH HOH . U 5 HOH E 30 430 202 HOH HOH . U 5 HOH E 31 431 147 HOH HOH . U 5 HOH E 32 432 350 HOH HOH . U 5 HOH E 33 433 237 HOH HOH . U 5 HOH E 34 434 125 HOH HOH . U 5 HOH E 35 435 378 HOH HOH . U 5 HOH E 36 436 26 HOH HOH . U 5 HOH E 37 437 283 HOH HOH . U 5 HOH E 38 438 174 HOH HOH . U 5 HOH E 39 439 431 HOH HOH . U 5 HOH E 40 440 142 HOH HOH . U 5 HOH E 41 441 144 HOH HOH . U 5 HOH E 42 442 195 HOH HOH . U 5 HOH E 43 443 136 HOH HOH . U 5 HOH E 44 444 463 HOH HOH . U 5 HOH E 45 445 175 HOH HOH . U 5 HOH E 46 446 249 HOH HOH . U 5 HOH E 47 447 390 HOH HOH . U 5 HOH E 48 448 260 HOH HOH . U 5 HOH E 49 449 421 HOH HOH . U 5 HOH E 50 450 430 HOH HOH . U 5 HOH E 51 451 374 HOH HOH . U 5 HOH E 52 452 184 HOH HOH . U 5 HOH E 53 453 420 HOH HOH . U 5 HOH E 54 454 114 HOH HOH . U 5 HOH E 55 455 252 HOH HOH . U 5 HOH E 56 456 456 HOH HOH . U 5 HOH E 57 457 105 HOH HOH . U 5 HOH E 58 458 460 HOH HOH . U 5 HOH E 59 459 441 HOH HOH . U 5 HOH E 60 460 419 HOH HOH . U 5 HOH E 61 461 166 HOH HOH . U 5 HOH E 62 462 243 HOH HOH . U 5 HOH E 63 463 309 HOH HOH . U 5 HOH E 64 464 428 HOH HOH . U 5 HOH E 65 465 336 HOH HOH . U 5 HOH E 66 466 304 HOH HOH . U 5 HOH E 67 467 429 HOH HOH . U 5 HOH E 68 468 328 HOH HOH . U 5 HOH E 69 469 179 HOH HOH . U 5 HOH E 70 470 464 HOH HOH . V 5 HOH F 1 301 163 HOH HOH . V 5 HOH F 2 302 7 HOH HOH . V 5 HOH F 3 303 59 HOH HOH . V 5 HOH F 4 304 339 HOH HOH . V 5 HOH F 5 305 173 HOH HOH . V 5 HOH F 6 306 116 HOH HOH . V 5 HOH F 7 307 226 HOH HOH . V 5 HOH F 8 308 19 HOH HOH . V 5 HOH F 9 309 212 HOH HOH . V 5 HOH F 10 310 272 HOH HOH . V 5 HOH F 11 311 8 HOH HOH . V 5 HOH F 12 312 360 HOH HOH . V 5 HOH F 13 313 6 HOH HOH . V 5 HOH F 14 314 101 HOH HOH . V 5 HOH F 15 315 27 HOH HOH . V 5 HOH F 16 316 170 HOH HOH . V 5 HOH F 17 317 73 HOH HOH . V 5 HOH F 18 318 313 HOH HOH . V 5 HOH F 19 319 30 HOH HOH . V 5 HOH F 20 320 90 HOH HOH . V 5 HOH F 21 321 178 HOH HOH . V 5 HOH F 22 322 201 HOH HOH . V 5 HOH F 23 323 151 HOH HOH . V 5 HOH F 24 324 278 HOH HOH . V 5 HOH F 25 325 303 HOH HOH . V 5 HOH F 26 326 100 HOH HOH . V 5 HOH F 27 327 119 HOH HOH . V 5 HOH F 28 328 327 HOH HOH . V 5 HOH F 29 329 56 HOH HOH . V 5 HOH F 30 330 83 HOH HOH . V 5 HOH F 31 331 186 HOH HOH . V 5 HOH F 32 332 137 HOH HOH . V 5 HOH F 33 333 471 HOH HOH . V 5 HOH F 34 334 405 HOH HOH . V 5 HOH F 35 335 68 HOH HOH . V 5 HOH F 36 336 478 HOH HOH . V 5 HOH F 37 337 211 HOH HOH . V 5 HOH F 38 338 407 HOH HOH . V 5 HOH F 39 339 461 HOH HOH . V 5 HOH F 40 340 391 HOH HOH . V 5 HOH F 41 341 477 HOH HOH . V 5 HOH F 42 342 284 HOH HOH . V 5 HOH F 43 343 455 HOH HOH . V 5 HOH F 44 344 468 HOH HOH . V 5 HOH F 45 345 454 HOH HOH . V 5 HOH F 46 346 215 HOH HOH . V 5 HOH F 47 347 334 HOH HOH . V 5 HOH F 48 348 375 HOH HOH . V 5 HOH F 49 349 392 HOH HOH . V 5 HOH F 50 350 474 HOH HOH . V 5 HOH F 51 351 476 HOH HOH . V 5 HOH F 52 352 353 HOH HOH . V 5 HOH F 53 353 452 HOH HOH . V 5 HOH F 54 354 469 HOH HOH . V 5 HOH F 55 355 362 HOH HOH . V 5 HOH F 56 356 300 HOH HOH . V 5 HOH F 57 357 408 HOH HOH . V 5 HOH F 58 358 138 HOH HOH . V 5 HOH F 59 359 453 HOH HOH . W 5 HOH G 1 401 35 HOH HOH . W 5 HOH G 2 402 393 HOH HOH . W 5 HOH G 3 403 404 HOH HOH . W 5 HOH G 4 404 267 HOH HOH . W 5 HOH G 5 405 329 HOH HOH . W 5 HOH G 6 406 81 HOH HOH . W 5 HOH G 7 407 15 HOH HOH . W 5 HOH G 8 408 85 HOH HOH . W 5 HOH G 9 409 276 HOH HOH . W 5 HOH G 10 410 273 HOH HOH . W 5 HOH G 11 411 248 HOH HOH . W 5 HOH G 12 412 21 HOH HOH . W 5 HOH G 13 413 36 HOH HOH . W 5 HOH G 14 414 89 HOH HOH . W 5 HOH G 15 415 380 HOH HOH . W 5 HOH G 16 416 337 HOH HOH . W 5 HOH G 17 417 196 HOH HOH . W 5 HOH G 18 418 153 HOH HOH . W 5 HOH G 19 419 58 HOH HOH . W 5 HOH G 20 420 72 HOH HOH . W 5 HOH G 21 421 139 HOH HOH . W 5 HOH G 22 422 61 HOH HOH . W 5 HOH G 23 423 129 HOH HOH . W 5 HOH G 24 424 12 HOH HOH . W 5 HOH G 25 425 95 HOH HOH . W 5 HOH G 26 426 340 HOH HOH . W 5 HOH G 27 427 165 HOH HOH . W 5 HOH G 28 428 299 HOH HOH . W 5 HOH G 29 429 156 HOH HOH . W 5 HOH G 30 430 354 HOH HOH . W 5 HOH G 31 431 370 HOH HOH . W 5 HOH G 32 432 54 HOH HOH . W 5 HOH G 33 433 314 HOH HOH . W 5 HOH G 34 434 388 HOH HOH . W 5 HOH G 35 435 386 HOH HOH . W 5 HOH G 36 436 376 HOH HOH . W 5 HOH G 37 437 372 HOH HOH . W 5 HOH G 38 438 403 HOH HOH . W 5 HOH G 39 439 74 HOH HOH . W 5 HOH G 40 440 451 HOH HOH . W 5 HOH G 41 441 205 HOH HOH . W 5 HOH G 42 442 111 HOH HOH . W 5 HOH G 43 443 381 HOH HOH . W 5 HOH G 44 444 254 HOH HOH . W 5 HOH G 45 445 331 HOH HOH . W 5 HOH G 46 446 218 HOH HOH . W 5 HOH G 47 447 475 HOH HOH . W 5 HOH G 48 448 269 HOH HOH . W 5 HOH G 49 449 94 HOH HOH . W 5 HOH G 50 450 332 HOH HOH . W 5 HOH G 51 451 326 HOH HOH . W 5 HOH G 52 452 363 HOH HOH . W 5 HOH G 53 453 443 HOH HOH . W 5 HOH G 54 454 345 HOH HOH . W 5 HOH G 55 455 442 HOH HOH . W 5 HOH G 56 456 250 HOH HOH . W 5 HOH G 57 457 457 HOH HOH . W 5 HOH G 58 458 470 HOH HOH . W 5 HOH G 59 459 235 HOH HOH . W 5 HOH G 60 460 219 HOH HOH . W 5 HOH G 61 461 308 HOH HOH . W 5 HOH G 62 462 373 HOH HOH . W 5 HOH G 63 463 465 HOH HOH . W 5 HOH G 64 464 321 HOH HOH . W 5 HOH G 65 465 64 HOH HOH . W 5 HOH G 66 466 177 HOH HOH . W 5 HOH G 67 467 402 HOH HOH . W 5 HOH G 68 468 270 HOH HOH . W 5 HOH G 69 469 434 HOH HOH . W 5 HOH G 70 470 293 HOH HOH . W 5 HOH G 71 471 197 HOH HOH . W 5 HOH G 72 472 466 HOH HOH . W 5 HOH G 73 473 128 HOH HOH . W 5 HOH G 74 474 126 HOH HOH . W 5 HOH G 75 475 448 HOH HOH . W 5 HOH G 76 476 473 HOH HOH . W 5 HOH G 77 477 181 HOH HOH . X 5 HOH H 1 301 206 HOH HOH . X 5 HOH H 2 302 11 HOH HOH . X 5 HOH H 3 303 121 HOH HOH . X 5 HOH H 4 304 10 HOH HOH . X 5 HOH H 5 305 246 HOH HOH . X 5 HOH H 6 306 24 HOH HOH . X 5 HOH H 7 307 45 HOH HOH . X 5 HOH H 8 308 220 HOH HOH . X 5 HOH H 9 309 41 HOH HOH . X 5 HOH H 10 310 159 HOH HOH . X 5 HOH H 11 311 255 HOH HOH . X 5 HOH H 12 312 427 HOH HOH . X 5 HOH H 13 313 31 HOH HOH . X 5 HOH H 14 314 241 HOH HOH . X 5 HOH H 15 315 209 HOH HOH . X 5 HOH H 16 316 131 HOH HOH . X 5 HOH H 17 317 187 HOH HOH . X 5 HOH H 18 318 233 HOH HOH . X 5 HOH H 19 319 379 HOH HOH . X 5 HOH H 20 320 286 HOH HOH . X 5 HOH H 21 321 9 HOH HOH . X 5 HOH H 22 322 132 HOH HOH . X 5 HOH H 23 323 104 HOH HOH . X 5 HOH H 24 324 265 HOH HOH . X 5 HOH H 25 325 221 HOH HOH . X 5 HOH H 26 326 149 HOH HOH . X 5 HOH H 27 327 88 HOH HOH . X 5 HOH H 28 328 69 HOH HOH . X 5 HOH H 29 329 152 HOH HOH . X 5 HOH H 30 330 66 HOH HOH . X 5 HOH H 31 331 411 HOH HOH . X 5 HOH H 32 332 271 HOH HOH . X 5 HOH H 33 333 180 HOH HOH . X 5 HOH H 34 334 96 HOH HOH . X 5 HOH H 35 335 449 HOH HOH . X 5 HOH H 36 336 310 HOH HOH . X 5 HOH H 37 337 240 HOH HOH . X 5 HOH H 38 338 109 HOH HOH . X 5 HOH H 39 339 18 HOH HOH . X 5 HOH H 40 340 192 HOH HOH . X 5 HOH H 41 341 198 HOH HOH . X 5 HOH H 42 342 148 HOH HOH . X 5 HOH H 43 343 338 HOH HOH . X 5 HOH H 44 344 410 HOH HOH . X 5 HOH H 45 345 406 HOH HOH . X 5 HOH H 46 346 383 HOH HOH . X 5 HOH H 47 347 458 HOH HOH . X 5 HOH H 48 348 282 HOH HOH . X 5 HOH H 49 349 426 HOH HOH . X 5 HOH H 50 350 446 HOH HOH . X 5 HOH H 51 351 389 HOH HOH . X 5 HOH H 52 352 435 HOH HOH . X 5 HOH H 53 353 292 HOH HOH . X 5 HOH H 54 354 398 HOH HOH . X 5 HOH H 55 355 450 HOH HOH . X 5 HOH H 56 356 335 HOH HOH . X 5 HOH H 57 357 247 HOH HOH . X 5 HOH H 58 358 231 HOH HOH . X 5 HOH H 59 359 399 HOH HOH . X 5 HOH H 60 360 280 HOH HOH . X 5 HOH H 61 361 333 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . L 4 33.751 5.648 63.102 1 29.42 ? PB GDP 202 B 1 HETATM 2 O O1B GDP . . . L 4 32.735 4.54 63.224 1 27.95 ? O1B GDP 202 B 1 HETATM 3 O O2B GDP . . . L 4 33.282 6.844 63.894 1 31.18 ? O2B GDP 202 B 1 HETATM 4 O O3B GDP . . . L 4 35.083 5.176 63.635 1 34.79 ? O3B GDP 202 B 1 HETATM 5 O O3A GDP . . . L 4 33.899 6.063 61.555 1 32.07 ? O3A GDP 202 B 1 HETATM 6 P PA GDP . . . L 4 34.876 5.253 60.565 1 32.24 ? PA GDP 202 B 1 HETATM 7 O O1A GDP . . . L 4 34.694 3.762 60.73 1 30.9 ? O1A GDP 202 B 1 HETATM 8 O O2A GDP . . . L 4 36.313 5.648 60.797 1 28.67 ? O2A GDP 202 B 1 HETATM 9 O O5' GDP . . . L 4 34.389 5.726 59.107 1 37.57 ? O5' GDP 202 B 1 HETATM 10 C C5' GDP . . . L 4 33.246 5.123 58.506 1 33.31 ? C5' GDP 202 B 1 HETATM 11 C C4' GDP . . . L 4 33.262 5.423 57.017 1 36.13 ? C4' GDP 202 B 1 HETATM 12 O O4' GDP . . . L 4 33.335 6.837 56.82 1 35.3 ? O4' GDP 202 B 1 HETATM 13 C C3' GDP . . . L 4 34.487 4.816 56.35 1 41.55 ? C3' GDP 202 B 1 HETATM 14 O O3' GDP . . . L 4 34.081 4.115 55.172 1 45 ? O3' GDP 202 B 1 HETATM 15 C C2' GDP . . . L 4 35.353 6 55.975 1 32.45 ? C2' GDP 202 B 1 HETATM 16 O O2' GDP . . . L 4 35.995 5.772 54.719 1 43.31 ? O2' GDP 202 B 1 HETATM 17 C C1' GDP . . . L 4 34.358 7.141 55.87 1 37.39 ? C1' GDP 202 B 1 HETATM 18 N N9 GDP . . . L 4 34.984 8.456 56.159 1 35.82 ? N9 GDP 202 B 1 HETATM 19 C C8 GDP . . . L 4 35.629 8.819 57.284 1 33.01 ? C8 GDP 202 B 1 HETATM 20 N N7 GDP . . . L 4 36.068 10.103 57.201 1 28.83 ? N7 GDP 202 B 1 HETATM 21 C C5 GDP . . . L 4 35.693 10.585 56.001 1 31.65 ? C5 GDP 202 B 1 HETATM 22 C C6 GDP . . . L 4 35.826 11.864 55.263 1 32.97 ? C6 GDP 202 B 1 HETATM 23 O O6 GDP . . . L 4 36.418 12.842 55.767 1 37.85 ? O6 GDP 202 B 1 HETATM 24 N N1 GDP . . . L 4 35.289 11.94 54.038 1 34.15 ? N1 GDP 202 B 1 HETATM 25 C C2 GDP . . . L 4 34.643 10.906 53.467 1 36.51 ? C2 GDP 202 B 1 HETATM 26 N N2 GDP . . . L 4 34.128 11.062 52.223 1 33.08 ? N2 GDP 202 B 1 HETATM 27 N N3 GDP . . . L 4 34.484 9.707 54.083 1 34.06 ? N3 GDP 202 B 1 HETATM 28 C C4 GDP . . . L 4 34.977 9.494 55.324 1 33.86 ? C4 GDP 202 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 28 #