data_7DNY # _model_server_result.job_id KLU0YQuc7Y9KTxo8IYBy6A _model_server_result.datetime_utc '2024-10-25 20:25:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dny # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":901}' # _entry.id 7DNY # _exptl.entry_id 7DNY _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DNY _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DNY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 464 n n CBA CAB Y01 sing 465 n n CBA CAN Y01 sing 466 n n CAN CAJ Y01 sing 467 n n CAJ CAO Y01 sing 468 n n CAO CBB Y01 sing 469 n n CBB CAC Y01 sing 470 n n CBB CBE Y01 sing 471 n n CBE CAP Y01 sing 472 n n CBE CBI Y01 sing 473 n n CAP CAQ Y01 sing 474 n n CAQ CBG Y01 sing 475 n n CBG CBI Y01 sing 476 n n CBG CBD Y01 sing 477 n n CBI CAE Y01 sing 478 n n CBI CAU Y01 sing 479 n n CAU CAS Y01 sing 480 n n CAS CBF Y01 sing 481 n n CBF CBD Y01 sing 482 n n CBF CBH Y01 sing 483 n n CBD CAK Y01 sing 484 n n CAK CAI Y01 sing 485 n n CAI CAZ Y01 doub 486 n n CAZ CAV Y01 sing 487 n n CAZ CBH Y01 sing 488 n n CAV CBC Y01 sing 489 n n CBH CAD Y01 sing 490 n n CBH CAT Y01 sing 491 n n CAT CAR Y01 sing 492 n n CAR CBC Y01 sing 493 n n CBC OAW Y01 sing 494 n n OAW CAY Y01 sing 495 n n CAY OAG Y01 doub 496 n n CAY CAM Y01 sing 497 n n CAM CAL Y01 sing 498 n n CAL CAX Y01 sing 499 n n CAX OAH Y01 sing 500 n n CAX OAF Y01 doub 501 n n CAA HAA1 Y01 sing 502 n n CAA HAA2 Y01 sing 503 n n CAA HAA3 Y01 sing 504 n n CBA HBA Y01 sing 505 n n CAB HAB1 Y01 sing 506 n n CAB HAB2 Y01 sing 507 n n CAB HAB3 Y01 sing 508 n n CAN HAN1 Y01 sing 509 n n CAN HAN2 Y01 sing 510 n n CAJ HAJ1 Y01 sing 511 n n CAJ HAJ2 Y01 sing 512 n n CAO HAO1 Y01 sing 513 n n CAO HAO2 Y01 sing 514 n n CBB HBB Y01 sing 515 n n CAC HAC1 Y01 sing 516 n n CAC HAC2 Y01 sing 517 n n CAC HAC3 Y01 sing 518 n n CBE HBE Y01 sing 519 n n CAP HAP1 Y01 sing 520 n n CAP HAP2 Y01 sing 521 n n CAQ HAQ1 Y01 sing 522 n n CAQ HAQ2 Y01 sing 523 n n CBG HBG Y01 sing 524 n n CBD HBD Y01 sing 525 n n CAE HAE1 Y01 sing 526 n n CAE HAE2 Y01 sing 527 n n CAE HAE3 Y01 sing 528 n n CAU HAU1 Y01 sing 529 n n CAU HAU2 Y01 sing 530 n n CAS HAS1 Y01 sing 531 n n CAS HAS2 Y01 sing 532 n n CBF HBF Y01 sing 533 n n CAK HAK1 Y01 sing 534 n n CAK HAK2 Y01 sing 535 n n CAI HAI Y01 sing 536 n n CAV HAV1 Y01 sing 537 n n CAV HAV2 Y01 sing 538 n n CBC HBC Y01 sing 539 n n CAD HAD1 Y01 sing 540 n n CAD HAD2 Y01 sing 541 n n CAD HAD3 Y01 sing 542 n n CAT HAT1 Y01 sing 543 n n CAT HAT2 Y01 sing 544 n n CAR HAR1 Y01 sing 545 n n CAR HAR2 Y01 sing 546 n n CAM HAM1 Y01 sing 547 n n CAM HAM2 Y01 sing 548 n n CAL HAL1 Y01 sing 549 n n CAL HAL2 Y01 sing 550 n n OAH HAH Y01 sing 551 n n # _atom_sites.entry_id 7DNY _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y01 A 1 901 1 Y01 Y01 . D 2 Y01 A 1 902 4 Y01 Y01 . E 2 Y01 A 1 903 5 Y01 Y01 . F 3 HT9 A 1 904 1 HT9 UNL . G 2 Y01 B 1 901 2 Y01 Y01 . H 2 Y01 B 1 902 3 Y01 Y01 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . C 2 93.083 93.153 96.937 1 94.72 ? CAA Y01 901 A 1 HETATM 2 C CBA Y01 . . . C 2 93.795 91.91 96.438 1 94.72 ? CBA Y01 901 A 1 HETATM 3 C CAB Y01 . . . C 2 95.282 92.003 96.724 1 94.72 ? CAB Y01 901 A 1 HETATM 4 C CAN Y01 . . . C 2 93.534 91.671 94.953 1 94.72 ? CAN Y01 901 A 1 HETATM 5 C CAJ Y01 . . . C 2 94.3 92.543 93.997 1 94.72 ? CAJ Y01 901 A 1 HETATM 6 C CAO Y01 . . . C 2 93.882 92.336 92.57 1 94.72 ? CAO Y01 901 A 1 HETATM 7 C CBB Y01 . . . C 2 94.99 91.887 91.608 1 94.72 ? CBB Y01 901 A 1 HETATM 8 C CAC Y01 . . . C 2 95.63 90.607 92.132 1 94.72 ? CAC Y01 901 A 1 HETATM 9 C CBE Y01 . . . C 2 94.414 91.741 90.187 1 94.72 ? CBE Y01 901 A 1 HETATM 10 C CAP Y01 . . . C 2 93.47 92.925 89.839 1 94.72 ? CAP Y01 901 A 1 HETATM 11 C CAQ Y01 . . . C 2 93.875 93.412 88.443 1 94.72 ? CAQ Y01 901 A 1 HETATM 12 C CBG Y01 . . . C 2 94.418 92.131 87.835 1 94.72 ? CBG Y01 901 A 1 HETATM 13 C CBI Y01 . . . C 2 95.345 91.588 88.939 1 94.72 ? CBI Y01 901 A 1 HETATM 14 C CAE Y01 . . . C 2 96.602 92.446 89.117 1 94.72 ? CAE Y01 901 A 1 HETATM 15 C CAU Y01 . . . C 2 95.734 90.172 88.504 1 94.72 ? CAU Y01 901 A 1 HETATM 16 C CAS Y01 . . . C 2 96.366 90.155 87.105 1 94.72 ? CAS Y01 901 A 1 HETATM 17 C CBF Y01 . . . C 2 95.45 90.764 86.031 1 94.72 ? CBF Y01 901 A 1 HETATM 18 C CBD Y01 . . . C 2 95.011 92.179 86.436 1 94.72 ? CBD Y01 901 A 1 HETATM 19 C CAK Y01 . . . C 2 93.968 92.702 85.457 1 94.72 ? CAK Y01 901 A 1 HETATM 20 C CAI Y01 . . . C 2 94.338 92.448 84.033 1 94.72 ? CAI Y01 901 A 1 HETATM 21 C CAZ Y01 . . . C 2 95.272 91.6 83.64 1 94.72 ? CAZ Y01 901 A 1 HETATM 22 C CAV Y01 . . . C 2 95.598 91.444 82.174 1 94.72 ? CAV Y01 901 A 1 HETATM 23 C CBH Y01 . . . C 2 96.036 90.686 84.59 1 94.72 ? CBH Y01 901 A 1 HETATM 24 C CAD Y01 . . . C 2 97.515 91.096 84.546 1 94.72 ? CAD Y01 901 A 1 HETATM 25 C CAT Y01 . . . C 2 95.902 89.244 84.055 1 94.72 ? CAT Y01 901 A 1 HETATM 26 C CAR Y01 . . . C 2 96.235 89.115 82.567 1 94.72 ? CAR Y01 901 A 1 HETATM 27 C CBC Y01 . . . C 2 95.363 90.023 81.746 1 94.72 ? CBC Y01 901 A 1 HETATM 28 O OAW Y01 . . . C 2 95.727 89.909 80.34 1 94.72 ? OAW Y01 901 A 1 HETATM 29 C CAY Y01 . . . C 2 94.971 89.146 79.555 1 94.72 ? CAY Y01 901 A 1 HETATM 30 O OAG Y01 . . . C 2 95.408 88.251 78.89 1 94.72 ? OAG Y01 901 A 1 HETATM 31 C CAM Y01 . . . C 2 93.518 89.572 79.557 1 94.72 ? CAM Y01 901 A 1 HETATM 32 C CAL Y01 . . . C 2 93.116 90.938 79.008 1 94.72 ? CAL Y01 901 A 1 HETATM 33 C CAX Y01 . . . C 2 93.28 91.12 77.509 1 94.72 ? CAX Y01 901 A 1 HETATM 34 O OAH Y01 . . . C 2 92.677 90.34 76.751 1 94.72 ? OAH Y01 901 A 1 HETATM 35 O OAF Y01 . . . C 2 94.001 92.05 77.105 1 94.72 ? OAF Y01 901 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 35 #