data_7DNY
#
_model_server_result.job_id            qnRVQlYnTCG9VkWy8isLyw 
_model_server_result.datetime_utc      '2024-12-26 19:58:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7dny 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":902}' 
#
_entry.id    7DNY 
#
_exptl.entry_id    7DNY 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7DNY 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DNY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 464 n n 
CBA CAB Y01 sing 465 n n 
CBA CAN Y01 sing 466 n n 
CAN CAJ Y01 sing 467 n n 
CAJ CAO Y01 sing 468 n n 
CAO CBB Y01 sing 469 n n 
CBB CAC Y01 sing 470 n n 
CBB CBE Y01 sing 471 n n 
CBE CAP Y01 sing 472 n n 
CBE CBI Y01 sing 473 n n 
CAP CAQ Y01 sing 474 n n 
CAQ CBG Y01 sing 475 n n 
CBG CBI Y01 sing 476 n n 
CBG CBD Y01 sing 477 n n 
CBI CAE Y01 sing 478 n n 
CBI CAU Y01 sing 479 n n 
CAU CAS Y01 sing 480 n n 
CAS CBF Y01 sing 481 n n 
CBF CBD Y01 sing 482 n n 
CBF CBH Y01 sing 483 n n 
CBD CAK Y01 sing 484 n n 
CAK CAI Y01 sing 485 n n 
CAI CAZ Y01 doub 486 n n 
CAZ CAV Y01 sing 487 n n 
CAZ CBH Y01 sing 488 n n 
CAV CBC Y01 sing 489 n n 
CBH CAD Y01 sing 490 n n 
CBH CAT Y01 sing 491 n n 
CAT CAR Y01 sing 492 n n 
CAR CBC Y01 sing 493 n n 
CBC OAW Y01 sing 494 n n 
OAW CAY Y01 sing 495 n n 
CAY OAG Y01 doub 496 n n 
CAY CAM Y01 sing 497 n n 
CAM CAL Y01 sing 498 n n 
CAL CAX Y01 sing 499 n n 
CAX OAH Y01 sing 500 n n 
CAX OAF Y01 doub 501 n n 
CAA HAA1 Y01 sing 502 n n 
CAA HAA2 Y01 sing 503 n n 
CAA HAA3 Y01 sing 504 n n 
CBA HBA Y01 sing 505 n n 
CAB HAB1 Y01 sing 506 n n 
CAB HAB2 Y01 sing 507 n n 
CAB HAB3 Y01 sing 508 n n 
CAN HAN1 Y01 sing 509 n n 
CAN HAN2 Y01 sing 510 n n 
CAJ HAJ1 Y01 sing 511 n n 
CAJ HAJ2 Y01 sing 512 n n 
CAO HAO1 Y01 sing 513 n n 
CAO HAO2 Y01 sing 514 n n 
CBB HBB Y01 sing 515 n n 
CAC HAC1 Y01 sing 516 n n 
CAC HAC2 Y01 sing 517 n n 
CAC HAC3 Y01 sing 518 n n 
CBE HBE Y01 sing 519 n n 
CAP HAP1 Y01 sing 520 n n 
CAP HAP2 Y01 sing 521 n n 
CAQ HAQ1 Y01 sing 522 n n 
CAQ HAQ2 Y01 sing 523 n n 
CBG HBG Y01 sing 524 n n 
CBD HBD Y01 sing 525 n n 
CAE HAE1 Y01 sing 526 n n 
CAE HAE2 Y01 sing 527 n n 
CAE HAE3 Y01 sing 528 n n 
CAU HAU1 Y01 sing 529 n n 
CAU HAU2 Y01 sing 530 n n 
CAS HAS1 Y01 sing 531 n n 
CAS HAS2 Y01 sing 532 n n 
CBF HBF Y01 sing 533 n n 
CAK HAK1 Y01 sing 534 n n 
CAK HAK2 Y01 sing 535 n n 
CAI HAI Y01 sing 536 n n 
CAV HAV1 Y01 sing 537 n n 
CAV HAV2 Y01 sing 538 n n 
CBC HBC Y01 sing 539 n n 
CAD HAD1 Y01 sing 540 n n 
CAD HAD2 Y01 sing 541 n n 
CAD HAD3 Y01 sing 542 n n 
CAT HAT1 Y01 sing 543 n n 
CAT HAT2 Y01 sing 544 n n 
CAR HAR1 Y01 sing 545 n n 
CAR HAR2 Y01 sing 546 n n 
CAM HAM1 Y01 sing 547 n n 
CAM HAM2 Y01 sing 548 n n 
CAL HAL1 Y01 sing 549 n n 
CAL HAL2 Y01 sing 550 n n 
OAH HAH Y01 sing 551 n n 
#
_atom_sites.entry_id                     7DNY 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 Y01 A 1 901 1 Y01 Y01 . 
D 2 Y01 A 1 902 4 Y01 Y01 . 
E 2 Y01 A 1 903 5 Y01 Y01 . 
F 3 HT9 A 1 904 1 HT9 UNL . 
G 2 Y01 B 1 901 2 Y01 Y01 . 
H 2 Y01 B 1 902 3 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . H 2 95.959 130.211 97.902 1 113.37 ? CAA Y01 902 B 1 
HETATM 2 C CBA Y01 . . . H 2 96.544 128.955 97.274 1 113.37 ? CBA Y01 902 B 1 
HETATM 3 C CAB Y01 . . . H 2 95.834 127.717 97.798 1 113.37 ? CAB Y01 902 B 1 
HETATM 4 C CAN Y01 . . . H 2 96.494 129.019 95.749 1 113.37 ? CAN Y01 902 B 1 
HETATM 5 C CAJ Y01 . . . H 2 97.147 127.866 95.031 1 113.37 ? CAJ Y01 902 B 1 
HETATM 6 C CAO Y01 . . . H 2 96.851 127.846 93.554 1 113.37 ? CAO Y01 902 B 1 
HETATM 7 C CBB Y01 . . . H 2 97.488 126.681 92.783 1 113.37 ? CBB Y01 902 B 1 
HETATM 8 C CAC Y01 . . . H 2 97.254 125.371 93.53 1 113.37 ? CAC Y01 902 B 1 
HETATM 9 C CBE Y01 . . . H 2 96.955 126.638 91.34 1 113.37 ? CBE Y01 902 B 1 
HETATM 10 C CAP Y01 . . . H 2 96.17 127.916 90.942 1 113.37 ? CAP Y01 902 B 1 
HETATM 11 C CAQ Y01 . . . H 2 96.216 127.99 89.4 1 113.37 ? CAQ Y01 902 B 1 
HETATM 12 C CBG Y01 . . . H 2 96.963 126.723 88.989 1 113.37 ? CBG Y01 902 B 1 
HETATM 13 C CBI Y01 . . . H 2 97.945 126.482 90.152 1 113.37 ? CBI Y01 902 B 1 
HETATM 14 C CAE Y01 . . . H 2 99.028 127.569 90.227 1 113.37 ? CAE Y01 902 B 1 
HETATM 15 C CAU Y01 . . . H 2 98.562 125.094 89.952 1 113.37 ? CAU Y01 902 B 1 
HETATM 16 C CAS Y01 . . . H 2 99.215 124.959 88.573 1 113.37 ? CAS Y01 902 B 1 
HETATM 17 C CBF Y01 . . . H 2 98.249 125.264 87.42 1 113.37 ? CBF Y01 902 B 1 
HETATM 18 C CBD Y01 . . . H 2 97.575 126.638 87.596 1 113.37 ? CBD Y01 902 B 1 
HETATM 19 C CAK Y01 . . . H 2 96.502 126.846 86.53 1 113.37 ? CAK Y01 902 B 1 
HETATM 20 C CAI Y01 . . . H 2 96.884 126.293 85.193 1 113.37 ? CAI Y01 902 B 1 
HETATM 21 C CAZ Y01 . . . H 2 97.988 125.609 84.937 1 113.37 ? CAZ Y01 902 B 1 
HETATM 22 C CAV Y01 . . . H 2 98.363 125.242 83.517 1 113.37 ? CAV Y01 902 B 1 
HETATM 23 C CBH Y01 . . . H 2 98.913 125.081 86.027 1 113.37 ? CBH Y01 902 B 1 
HETATM 24 C CAD Y01 . . . H 2 100.258 125.825 85.928 1 113.37 ? CAD Y01 902 B 1 
HETATM 25 C CAT Y01 . . . H 2 99.133 123.57 85.779 1 113.37 ? CAT Y01 902 B 1 
HETATM 26 C CAR Y01 . . . H 2 99.498 123.218 84.335 1 113.37 ? CAR Y01 902 B 1 
HETATM 27 C CBC Y01 . . . H 2 98.473 123.743 83.367 1 113.37 ? CBC Y01 902 B 1 
HETATM 28 O OAW Y01 . . . H 2 98.896 123.437 82.004 1 113.37 ? OAW Y01 902 B 1 
HETATM 29 C CAY Y01 . . . H 2 97.971 123.345 81.05 1 113.37 ? CAY Y01 902 B 1 
HETATM 30 O OAG Y01 . . . H 2 97.042 124.092 80.94 1 113.37 ? OAG Y01 902 B 1 
HETATM 31 C CAM Y01 . . . H 2 98.224 122.181 80.133 1 113.37 ? CAM Y01 902 B 1 
HETATM 32 C CAL Y01 . . . H 2 99.439 121.327 80.429 1 113.37 ? CAL Y01 902 B 1 
HETATM 33 C CAX Y01 . . . H 2 99.574 120.089 79.56 1 113.37 ? CAX Y01 902 B 1 
HETATM 34 O OAH Y01 . . . H 2 99.663 120.241 78.326 1 113.37 ? OAH Y01 902 B 1 
HETATM 35 O OAF Y01 . . . H 2 99.592 118.975 80.12 1 113.37 ? OAF Y01 902 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           35 
#