data_7DP0
#
_model_server_result.job_id            CW-nGvxEy3F8lSYqVuZ__Q 
_model_server_result.datetime_utc      '2024-11-22 17:48:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7dp0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    7DP0 
#
_exptl.entry_id    7DP0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7DP0 
_cell.length_a            90.626 
_cell.length_b            90.626 
_cell.length_c            101.642 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DP0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    'P 4nw 2abw' 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     7DP0 
_atom_sites.fract_transf_matrix[1][1]    0.011034 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011034 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009838 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 301 1 FMN FMN . 
D 2 FMN B 1 301 2 FMN FMN . 
E 3 HOH A 1 401 53 HOH HOH . 
E 3 HOH A 2 402 69 HOH HOH . 
E 3 HOH A 3 403 4 HOH HOH . 
E 3 HOH A 4 404 36 HOH HOH . 
E 3 HOH A 5 405 39 HOH HOH . 
E 3 HOH A 6 406 43 HOH HOH . 
E 3 HOH A 7 407 27 HOH HOH . 
E 3 HOH A 8 408 16 HOH HOH . 
E 3 HOH A 9 409 2 HOH HOH . 
E 3 HOH A 10 410 22 HOH HOH . 
E 3 HOH A 11 411 65 HOH HOH . 
E 3 HOH A 12 412 13 HOH HOH . 
E 3 HOH A 13 413 30 HOH HOH . 
E 3 HOH A 14 414 1 HOH HOH . 
E 3 HOH A 15 415 12 HOH HOH . 
E 3 HOH A 16 416 18 HOH HOH . 
E 3 HOH A 17 417 9 HOH HOH . 
E 3 HOH A 18 418 11 HOH HOH . 
E 3 HOH A 19 419 14 HOH HOH . 
E 3 HOH A 20 420 60 HOH HOH . 
E 3 HOH A 21 421 38 HOH HOH . 
E 3 HOH A 22 422 74 HOH HOH . 
E 3 HOH A 23 423 37 HOH HOH . 
E 3 HOH A 24 424 29 HOH HOH . 
E 3 HOH A 25 425 45 HOH HOH . 
E 3 HOH A 26 426 25 HOH HOH . 
E 3 HOH A 27 427 24 HOH HOH . 
E 3 HOH A 28 428 21 HOH HOH . 
E 3 HOH A 29 429 48 HOH HOH . 
E 3 HOH A 30 430 33 HOH HOH . 
E 3 HOH A 31 431 76 HOH HOH . 
E 3 HOH A 32 432 3 HOH HOH . 
E 3 HOH A 33 433 32 HOH HOH . 
E 3 HOH A 34 434 56 HOH HOH . 
E 3 HOH A 35 435 72 HOH HOH . 
E 3 HOH A 36 436 73 HOH HOH . 
E 3 HOH A 37 437 52 HOH HOH . 
E 3 HOH A 38 438 61 HOH HOH . 
E 3 HOH A 39 439 71 HOH HOH . 
E 3 HOH A 40 440 70 HOH HOH . 
F 3 HOH B 1 401 68 HOH HOH . 
F 3 HOH B 2 402 17 HOH HOH . 
F 3 HOH B 3 403 64 HOH HOH . 
F 3 HOH B 4 404 20 HOH HOH . 
F 3 HOH B 5 405 47 HOH HOH . 
F 3 HOH B 6 406 58 HOH HOH . 
F 3 HOH B 7 407 23 HOH HOH . 
F 3 HOH B 8 408 42 HOH HOH . 
F 3 HOH B 9 409 44 HOH HOH . 
F 3 HOH B 10 410 66 HOH HOH . 
F 3 HOH B 11 411 34 HOH HOH . 
F 3 HOH B 12 412 31 HOH HOH . 
F 3 HOH B 13 413 8 HOH HOH . 
F 3 HOH B 14 414 19 HOH HOH . 
F 3 HOH B 15 415 62 HOH HOH . 
F 3 HOH B 16 416 55 HOH HOH . 
F 3 HOH B 17 417 26 HOH HOH . 
F 3 HOH B 18 418 10 HOH HOH . 
F 3 HOH B 19 419 50 HOH HOH . 
F 3 HOH B 20 420 51 HOH HOH . 
F 3 HOH B 21 421 41 HOH HOH . 
F 3 HOH B 22 422 5 HOH HOH . 
F 3 HOH B 23 423 59 HOH HOH . 
F 3 HOH B 24 424 6 HOH HOH . 
F 3 HOH B 25 425 35 HOH HOH . 
F 3 HOH B 26 426 7 HOH HOH . 
F 3 HOH B 27 427 49 HOH HOH . 
F 3 HOH B 28 428 15 HOH HOH . 
F 3 HOH B 29 429 57 HOH HOH . 
F 3 HOH B 30 430 28 HOH HOH . 
F 3 HOH B 31 431 40 HOH HOH . 
F 3 HOH B 32 432 77 HOH HOH . 
F 3 HOH B 33 433 54 HOH HOH . 
F 3 HOH B 34 434 63 HOH HOH . 
F 3 HOH B 35 435 46 HOH HOH . 
F 3 HOH B 36 436 67 HOH HOH . 
F 3 HOH B 37 437 75 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . D 2 -6.575 -29.136 -28.34 1 29.66 ? N1 FMN 301 B 1 
HETATM 2 C C2 FMN . . . D 2 -5.502 -29.556 -29.1 1 31.51 ? C2 FMN 301 B 1 
HETATM 3 O O2 FMN . . . D 2 -5.145 -30.743 -29.049 1 32.01 ? O2 FMN 301 B 1 
HETATM 4 N N3 FMN . . . D 2 -4.823 -28.64 -29.888 1 41.33 ? N3 FMN 301 B 1 
HETATM 5 C C4 FMN . . . D 2 -5.226 -27.316 -29.951 1 34.7 ? C4 FMN 301 B 1 
HETATM 6 O O4 FMN . . . D 2 -4.617 -26.515 -30.68 1 36.54 ? O4 FMN 301 B 1 
HETATM 7 C C4A FMN . . . D 2 -6.315 -26.916 -29.181 1 29.27 ? C4A FMN 301 B 1 
HETATM 8 N N5 FMN . . . D 2 -6.746 -25.616 -29.197 1 28.81 ? N5 FMN 301 B 1 
HETATM 9 C C5A FMN . . . D 2 -7.85 -25.239 -28.452 1 31.81 ? C5A FMN 301 B 1 
HETATM 10 C C6 FMN . . . D 2 -8.28 -23.919 -28.514 1 29.68 ? C6 FMN 301 B 1 
HETATM 11 C C7 FMN . . . D 2 -9.378 -23.504 -27.776 1 36.17 ? C7 FMN 301 B 1 
HETATM 12 C C7M FMN . . . D 2 -9.824 -22.072 -27.862 1 25.54 ? C7M FMN 301 B 1 
HETATM 13 C C8 FMN . . . D 2 -10.06 -24.413 -26.971 1 33.23 ? C8 FMN 301 B 1 
HETATM 14 C C8M FMN . . . D 2 -11.265 -23.962 -26.191 1 21.4 ? C8M FMN 301 B 1 
HETATM 15 C C9 FMN . . . D 2 -9.627 -25.738 -26.901 1 24.84 ? C9 FMN 301 B 1 
HETATM 16 C C9A FMN . . . D 2 -8.529 -26.161 -27.658 1 27.07 ? C9A FMN 301 B 1 
HETATM 17 N N10 FMN . . . D 2 -8.074 -27.469 -27.611 1 32.87 ? N10 FMN 301 B 1 
HETATM 18 C C10 FMN . . . D 2 -6.987 -27.833 -28.377 1 33.15 ? C10 FMN 301 B 1 
HETATM 19 C C1' FMN . . . D 2 -8.768 -28.534 -26.793 1 27.68 ? C1' FMN 301 B 1 
HETATM 20 C C2' FMN . . . D 2 -8.544 -28.428 -25.281 1 24.2 ? C2' FMN 301 B 1 
HETATM 21 O O2' FMN . . . D 2 -7.348 -29.04 -24.868 1 25.09 ? O2' FMN 301 B 1 
HETATM 22 C C3' FMN . . . D 2 -9.731 -29.094 -24.598 1 23.87 ? C3' FMN 301 B 1 
HETATM 23 O O3' FMN . . . D 2 -10.853 -28.279 -24.803 1 23.01 ? O3' FMN 301 B 1 
HETATM 24 C C4' FMN . . . D 2 -9.543 -29.296 -23.09 1 23.78 ? C4' FMN 301 B 1 
HETATM 25 O O4' FMN . . . D 2 -8.43 -30.148 -22.909 1 26.59 ? O4' FMN 301 B 1 
HETATM 26 C C5' FMN . . . D 2 -10.781 -29.947 -22.495 1 23.69 ? C5' FMN 301 B 1 
HETATM 27 O O5' FMN . . . D 2 -10.947 -31.157 -23.222 1 31.51 ? O5' FMN 301 B 1 
HETATM 28 P P FMN . . . D 2 -12.298 -31.494 -24.053 1 29.9 ? P FMN 301 B 1 
HETATM 29 O O1P FMN . . . D 2 -13.451 -31.643 -23.072 1 31.89 ? O1P FMN 301 B 1 
HETATM 30 O O2P FMN . . . D 2 -12.13 -32.786 -24.836 1 25.98 ? O2P FMN 301 B 1 
HETATM 31 O O3P FMN . . . D 2 -12.653 -30.35 -24.948 1 30.15 ? O3P FMN 301 B 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#