data_7DPJ
#
_model_server_result.job_id            BbdDS9877BL8o_AdI8Xdag 
_model_server_result.datetime_utc      '2024-11-15 09:59:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7dpj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":204}' 
#
_entry.id    7DPJ 
#
_exptl.entry_id    7DPJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7DPJ 
_cell.length_a            91.844 
_cell.length_b            91.844 
_cell.length_c            121.413 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DPJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 22 A SER 17 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc2 A O ASN 31 A ASN 26 1_555 E CA CA . A CA 204 18_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc3 A OD1 ASP 35 A ASP 30 1_555 D CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc4 A OD1 ASP 35 A ASP 30 1_555 D CA CA . A CA 203 18_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc5 A OE2 GLU 36 A GLU 31 1_555 D CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc6 A OE2 GLU 36 A GLU 31 1_555 D CA CA . A CA 203 18_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc7 A OD1 ASP 38 A ASP 33 1_555 E CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? 
metalc ? metalc8 A OD2 ASP 38 A ASP 33 1_555 E CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? 
metalc ? metalc9 A O THR 40 A THR 35 1_555 E CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc10 A OG1 THR 40 A THR 35 1_555 E CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? 
metalc ? metalc11 A O ARG 107 A ARG 102 1_555 F CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc12 A O ARG 107 A ARG 102 1_555 F CA CA . A CA 205 16_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc13 A OD1 ASP 110 A ASP 105 1_555 F CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc14 A OD2 ASP 110 A ASP 105 1_555 F CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc15 A OD1 ASP 110 A ASP 105 1_555 F CA CA . A CA 205 16_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
metalc ? metalc16 A OD2 ASP 110 A ASP 105 1_555 F CA CA . A CA 205 16_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc17 B MG MG . A MG 201 1_555 G O2G GNP . A GNP 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc18 B MG MG . A MG 201 1_555 G O2B GNP . A GNP 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
metalc ? metalc19 B MG MG . A MG 201 1_555 H O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc20 B MG MG . A MG 201 1_555 H O HOH . A HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? 
metalc ? metalc21 B MG MG . A MG 201 1_555 H O HOH . A HOH 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc22 C MG MG . A MG 202 1_555 H O HOH . A HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc23 C MG MG . A MG 202 1_555 H O HOH . A HOH 335 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc24 C MG MG . A MG 202 1_555 H O HOH . A HOH 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc25 C MG MG . A MG 202 1_555 H O HOH . A HOH 345 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc26 D CA CA . A CA 203 1_555 H O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc27 D CA CA . A CA 203 1_555 H O HOH . A HOH 314 18_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
metalc ? metalc28 D CA CA . A CA 203 1_555 H O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc29 D CA CA . A CA 203 1_555 H O HOH . A HOH 330 18_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc30 E CA CA . A CA 204 1_555 H O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.904 ? 
metalc ? metalc31 F CA CA . A CA 205 1_555 H O HOH . A HOH 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc32 F CA CA . A CA 205 1_555 H O HOH . A HOH 353 16_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7DPJ 
_atom_sites.fract_transf_matrix[1][1]    0.010888 
_atom_sites.fract_transf_matrix[1][2]    0.006286 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012572 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008236 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 201 201 MG MG . 
C 2 MG A 1 202 202 MG MG . 
D 3 CA A 1 203 301 CA CA . 
E 3 CA A 1 204 302 CA CA . 
F 3 CA A 1 205 303 CA CA . 
G 4 GNP A 1 206 528 GNP GNP . 
H 5 HOH A 1 301 2 HOH HOH . 
H 5 HOH A 2 302 47 HOH HOH . 
H 5 HOH A 3 303 46 HOH HOH . 
H 5 HOH A 4 304 1 HOH HOH . 
H 5 HOH A 5 305 66 HOH HOH . 
H 5 HOH A 6 306 62 HOH HOH . 
H 5 HOH A 7 307 32 HOH HOH . 
H 5 HOH A 8 308 19 HOH HOH . 
H 5 HOH A 9 309 45 HOH HOH . 
H 5 HOH A 10 310 48 HOH HOH . 
H 5 HOH A 11 311 68 HOH HOH . 
H 5 HOH A 12 312 41 HOH HOH . 
H 5 HOH A 13 313 15 HOH HOH . 
H 5 HOH A 14 314 60 HOH HOH . 
H 5 HOH A 15 315 16 HOH HOH . 
H 5 HOH A 16 316 12 HOH HOH . 
H 5 HOH A 17 317 4 HOH HOH . 
H 5 HOH A 18 318 24 HOH HOH . 
H 5 HOH A 19 319 40 HOH HOH . 
H 5 HOH A 20 320 25 HOH HOH . 
H 5 HOH A 21 321 3 HOH HOH . 
H 5 HOH A 22 322 10 HOH HOH . 
H 5 HOH A 23 323 26 HOH HOH . 
H 5 HOH A 24 324 27 HOH HOH . 
H 5 HOH A 25 325 9 HOH HOH . 
H 5 HOH A 26 326 20 HOH HOH . 
H 5 HOH A 27 327 35 HOH HOH . 
H 5 HOH A 28 328 51 HOH HOH . 
H 5 HOH A 29 329 38 HOH HOH . 
H 5 HOH A 30 330 59 HOH HOH . 
H 5 HOH A 31 331 7 HOH HOH . 
H 5 HOH A 32 332 53 HOH HOH . 
H 5 HOH A 33 333 39 HOH HOH . 
H 5 HOH A 34 334 30 HOH HOH . 
H 5 HOH A 35 335 6 HOH HOH . 
H 5 HOH A 36 336 71 HOH HOH . 
H 5 HOH A 37 337 14 HOH HOH . 
H 5 HOH A 38 338 5 HOH HOH . 
H 5 HOH A 39 339 50 HOH HOH . 
H 5 HOH A 40 340 21 HOH HOH . 
H 5 HOH A 41 341 34 HOH HOH . 
H 5 HOH A 42 342 36 HOH HOH . 
H 5 HOH A 43 343 64 HOH HOH . 
H 5 HOH A 44 344 61 HOH HOH . 
H 5 HOH A 45 345 28 HOH HOH . 
H 5 HOH A 46 346 22 HOH HOH . 
H 5 HOH A 47 347 42 HOH HOH . 
H 5 HOH A 48 348 44 HOH HOH . 
H 5 HOH A 49 349 33 HOH HOH . 
H 5 HOH A 50 350 8 HOH HOH . 
H 5 HOH A 51 351 56 HOH HOH . 
H 5 HOH A 52 352 13 HOH HOH . 
H 5 HOH A 53 353 37 HOH HOH . 
H 5 HOH A 54 354 67 HOH HOH . 
H 5 HOH A 55 355 49 HOH HOH . 
H 5 HOH A 56 356 69 HOH HOH . 
H 5 HOH A 57 357 18 HOH HOH . 
H 5 HOH A 58 358 63 HOH HOH . 
H 5 HOH A 59 359 52 HOH HOH . 
H 5 HOH A 60 360 70 HOH HOH . 
H 5 HOH A 61 361 43 HOH HOH . 
H 5 HOH A 62 362 55 HOH HOH . 
H 5 HOH A 63 363 65 HOH HOH . 
H 5 HOH A 64 364 54 HOH HOH . 
H 5 HOH A 65 365 17 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -14.877 
_atom_site.Cartn_y               -19.056 
_atom_site.Cartn_z               -12.02 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        33.9 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           204 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#