data_7DQ0 # _model_server_result.job_id Hu3QdM-NWAR7gg_Y6FqRTg _model_server_result.datetime_utc '2025-01-06 21:56:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dq0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":101}' # _entry.id 7DQ0 # _exptl.entry_id 7DQ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DQ0 _cell.length_a 30.188 _cell.length_b 30.188 _cell.length_c 137.608 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DQ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG N2C 3 D N2C 3 1_555 D SG NCY 7 D NCY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? covale ? covale1 C C THR 1 C THR 1 1_555 C N DVA 2 C DVA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 C OG1 THR 1 C THR 1 1_555 C C MVA 5 C MVA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? covale ? covale3 C N THR 1 C THR 1 1_555 C C0' PXZ 6 C PXZ 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale4 C C DVA 2 C DVA 2 1_555 C N PRO 3 C PRO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale5 C C PRO 3 C PRO 3 1_555 C N SAR 4 C SAR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 C C SAR 4 C SAR 4 1_555 C N MVA 5 C MVA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale7 C C0 PXZ 6 C PXZ 6 1_555 C N THR 7 C THR 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale8 C C THR 7 C THR 7 1_555 C N DVA 8 C DVA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale9 C OG1 THR 7 C THR 7 1_555 C C MVA 11 C MVA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? covale ? covale10 C C DVA 8 C DVA 8 1_555 C N PRO 9 C PRO 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale11 C C PRO 9 C PRO 9 1_555 C N SAR 10 C SAR 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 C C SAR 10 C SAR 10 1_555 C N MVA 11 C MVA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale13 D C DSN 1 D DSN 1 1_555 D N ALA 2 D ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale14 D OG DSN 1 D DSN 1 1_555 D C MVA 8 D MVA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale15 D N DSN 1 D DSN 1 1_555 J C QUI . D QUI 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? covale ? covale16 D C ALA 2 D ALA 2 1_555 D N N2C 3 D N2C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale17 D C N2C 3 D N2C 3 1_555 D N MVA 4 D MVA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale18 D CB N2C 3 D N2C 3 1_555 D SG NCY 7 D NCY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? covale ? covale19 D C MVA 4 D MVA 4 1_555 D OG DSN 5 D DSN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? covale ? covale20 D C DSN 5 D DSN 5 1_555 D N ALA 6 D ALA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale21 D N DSN 5 D DSN 5 1_555 I C QUI . D QUI 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.421 ? covale ? covale22 D C ALA 6 D ALA 6 1_555 D N NCY 7 D NCY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale23 D C NCY 7 D NCY 7 1_555 D N MVA 8 D MVA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? metalc ? metalc1 A N7 DA 1 A DA 1 1_555 E ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc2 A OP2 DT 4 A DT 4 1_555 F ZN ZN . A ZN 102 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc3 A N7 DG 6 A DG 6 1_555 F ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc4 E ZN ZN . A ZN 101 1_555 K O HOH . A HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.722 ? metalc ? metalc5 E ZN ZN . A ZN 101 1_555 K O HOH . A HOH 213 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc6 F ZN ZN . A ZN 102 1_555 K O HOH . A HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc7 F ZN ZN . A ZN 102 1_555 K O HOH . A HOH 209 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? hydrog WATSON-CRICK hydrog1 A N1 DA 1 A DA 1 1_555 B N3 DT 7 B DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N6 DA 1 A DA 1 1_555 B O4 DT 7 B DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N1 DG 2 A DG 2 1_555 B N3 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N2 DG 2 A DG 2 1_555 B O2 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O6 DG 2 A DG 2 1_555 B N4 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_18_PAIR hydrog6 A N3 DC 3 A DC 3 1_555 B N3 DT 4 B DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_18_PAIR hydrog7 A N4 DC 3 A DC 3 1_555 B O4 DT 4 B DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N3 DC 3 A DC 3 1_555 B N1 DG 5 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N4 DC 3 A DC 3 1_555 B O6 DG 5 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O2 DC 3 A DC 3 1_555 B N2 DG 5 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_16_PAIR hydrog11 A N3 DT 4 A DT 4 1_555 B O2 DT 4 B DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_16_PAIR hydrog12 A O4 DT 4 A DT 4 1_555 B N3 DT 4 B DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N3 DC 5 A DC 5 1_555 B N1 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N4 DC 5 A DC 5 1_555 B O6 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A O2 DC 5 A DC 5 1_555 B N2 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N1 DG 6 A DG 6 1_555 B N3 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N2 DG 6 A DG 6 1_555 B O2 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O6 DG 6 A DG 6 1_555 B N4 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N3 DT 7 A DT 7 1_555 B N1 DA 1 B DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O4 DT 7 A DT 7 1_555 B N6 DA 1 B DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DQ0 _atom_sites.fract_transf_matrix[1][1] 0.033126 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033126 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZN A 1 101 5 ZN ZN . F 5 ZN A 1 102 6 ZN ZN . G 6 CL A 1 103 1 CL CL . H 5 ZN B 1 101 1 ZN ZN . I 7 QUI D 1 101 102 QUI QUI . J 7 QUI D 1 102 101 QUI QUI . K 8 HOH A 1 201 21 HOH HOH . K 8 HOH A 2 202 78 HOH HOH . K 8 HOH A 3 203 91 HOH HOH . K 8 HOH A 4 204 87 HOH HOH . K 8 HOH A 5 205 97 HOH HOH . K 8 HOH A 6 206 86 HOH HOH . K 8 HOH A 7 207 9 HOH HOH . K 8 HOH A 8 208 95 HOH HOH . K 8 HOH A 9 209 93 HOH HOH . K 8 HOH A 10 210 17 HOH HOH . K 8 HOH A 11 211 36 HOH HOH . K 8 HOH A 12 212 5 HOH HOH . K 8 HOH A 13 213 96 HOH HOH . K 8 HOH A 14 214 59 HOH HOH . K 8 HOH A 15 215 52 HOH HOH . K 8 HOH A 16 216 45 HOH HOH . L 8 HOH B 1 201 94 HOH HOH . L 8 HOH B 2 202 82 HOH HOH . L 8 HOH B 3 203 7 HOH HOH . L 8 HOH B 4 204 81 HOH HOH . L 8 HOH B 5 205 89 HOH HOH . L 8 HOH B 6 206 49 HOH HOH . L 8 HOH B 7 207 27 HOH HOH . M 8 HOH C 1 101 44 HOH HOH . N 8 HOH D 1 201 15 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x 5.789 _atom_site.Cartn_y 5.789 _atom_site.Cartn_z 0 _atom_site.occupancy 0.49 _atom_site.B_iso_or_equiv 14.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #