data_7DQE # _model_server_result.job_id SVhj-u5ooOOVSeu6HhU6OQ _model_server_result.datetime_utc '2024-10-11 03:24:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dqe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":601}' # _entry.id 7DQE # _exptl.entry_id 7DQE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DQE _cell.length_a 120.03 _cell.length_b 121.09 _cell.length_c 231.47 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DQE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 23 1_555 E SG CYS 71 E CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 30 B CYS 23 1_555 F SG CYS 71 F CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 C SG CYS 30 C CYS 23 1_555 D SG CYS 71 D CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A OG1 THR 246 A THR 239 1_555 G MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc2 G MG MG . A MG 601 1_555 H O1B ADP . A ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc3 G MG MG . A MG 601 1_555 I O2 SO4 . A SO4 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc4 G MG MG . A MG 601 1_555 I O4 SO4 . A SO4 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc5 G MG MG . A MG 601 1_555 N O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc6 G MG MG . A MG 601 1_555 N O HOH . A HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc7 B OG1 THR 246 B THR 239 1_555 J MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc8 J MG MG . B MG 601 1_555 K O3B ADP . B ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc9 J MG MG . B MG 601 1_555 O O HOH . B HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc10 J MG MG . B MG 601 1_555 O O HOH . B HOH 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc11 C OG1 THR 246 C THR 239 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc12 L MG MG . C MG 601 1_555 M O1B ADP . C ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc13 L MG MG . C MG 601 1_555 P O HOH . C HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc14 L MG MG . C MG 601 1_555 P O HOH . C HOH 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc15 L MG MG . C MG 601 1_555 P O HOH . C HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DQE _atom_sites.fract_transf_matrix[1][1] 0.008331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00432 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 MG A 1 601 2 MG MG . H 4 ADP A 1 602 1 ADP ADP . I 5 SO4 A 1 603 1 SO4 SO4 . J 3 MG B 1 601 3 MG MG . K 4 ADP B 1 602 2 ADP ADP . L 3 MG C 1 601 4 MG MG . M 4 ADP C 1 602 3 ADP ADP . N 6 HOH A 1 701 341 HOH HOH . N 6 HOH A 2 702 340 HOH HOH . N 6 HOH A 3 703 339 HOH HOH . N 6 HOH A 4 704 342 HOH HOH . N 6 HOH A 5 705 159 HOH HOH . N 6 HOH A 6 706 279 HOH HOH . N 6 HOH A 7 707 254 HOH HOH . N 6 HOH A 8 708 202 HOH HOH . N 6 HOH A 9 709 152 HOH HOH . N 6 HOH A 10 710 245 HOH HOH . N 6 HOH A 11 711 244 HOH HOH . N 6 HOH A 12 712 260 HOH HOH . N 6 HOH A 13 713 95 HOH HOH . N 6 HOH A 14 714 140 HOH HOH . N 6 HOH A 15 715 272 HOH HOH . N 6 HOH A 16 716 306 HOH HOH . N 6 HOH A 17 717 308 HOH HOH . N 6 HOH A 18 718 277 HOH HOH . N 6 HOH A 19 719 186 HOH HOH . N 6 HOH A 20 720 139 HOH HOH . N 6 HOH A 21 721 2 HOH HOH . N 6 HOH A 22 722 221 HOH HOH . N 6 HOH A 23 723 273 HOH HOH . N 6 HOH A 24 724 301 HOH HOH . N 6 HOH A 25 725 338 HOH HOH . N 6 HOH A 26 726 69 HOH HOH . O 6 HOH B 1 701 343 HOH HOH . O 6 HOH B 2 702 265 HOH HOH . O 6 HOH B 3 703 299 HOH HOH . O 6 HOH B 4 704 191 HOH HOH . O 6 HOH B 5 705 132 HOH HOH . O 6 HOH B 6 706 174 HOH HOH . O 6 HOH B 7 707 55 HOH HOH . O 6 HOH B 8 708 355 HOH HOH . O 6 HOH B 9 709 48 HOH HOH . O 6 HOH B 10 710 344 HOH HOH . O 6 HOH B 11 711 127 HOH HOH . O 6 HOH B 12 712 63 HOH HOH . O 6 HOH B 13 713 72 HOH HOH . O 6 HOH B 14 714 89 HOH HOH . O 6 HOH B 15 715 346 HOH HOH . O 6 HOH B 16 716 35 HOH HOH . O 6 HOH B 17 717 105 HOH HOH . O 6 HOH B 18 718 38 HOH HOH . O 6 HOH B 19 719 234 HOH HOH . O 6 HOH B 20 720 84 HOH HOH . O 6 HOH B 21 721 144 HOH HOH . O 6 HOH B 22 722 269 HOH HOH . O 6 HOH B 23 723 175 HOH HOH . O 6 HOH B 24 724 71 HOH HOH . O 6 HOH B 25 725 24 HOH HOH . O 6 HOH B 26 726 151 HOH HOH . O 6 HOH B 27 727 148 HOH HOH . O 6 HOH B 28 728 178 HOH HOH . O 6 HOH B 29 729 133 HOH HOH . O 6 HOH B 30 730 121 HOH HOH . O 6 HOH B 31 731 87 HOH HOH . O 6 HOH B 32 732 192 HOH HOH . O 6 HOH B 33 733 29 HOH HOH . O 6 HOH B 34 734 43 HOH HOH . O 6 HOH B 35 735 75 HOH HOH . O 6 HOH B 36 736 198 HOH HOH . O 6 HOH B 37 737 229 HOH HOH . O 6 HOH B 38 738 347 HOH HOH . P 6 HOH C 1 701 348 HOH HOH . P 6 HOH C 2 702 59 HOH HOH . P 6 HOH C 3 703 210 HOH HOH . P 6 HOH C 4 704 51 HOH HOH . P 6 HOH C 5 705 352 HOH HOH . P 6 HOH C 6 706 50 HOH HOH . P 6 HOH C 7 707 70 HOH HOH . P 6 HOH C 8 708 353 HOH HOH . P 6 HOH C 9 709 350 HOH HOH . P 6 HOH C 10 710 128 HOH HOH . P 6 HOH C 11 711 284 HOH HOH . P 6 HOH C 12 712 264 HOH HOH . P 6 HOH C 13 713 62 HOH HOH . P 6 HOH C 14 714 285 HOH HOH . P 6 HOH C 15 715 131 HOH HOH . P 6 HOH C 16 716 41 HOH HOH . P 6 HOH C 17 717 114 HOH HOH . P 6 HOH C 18 718 49 HOH HOH . P 6 HOH C 19 719 184 HOH HOH . P 6 HOH C 20 720 124 HOH HOH . P 6 HOH C 21 721 147 HOH HOH . P 6 HOH C 22 722 123 HOH HOH . P 6 HOH C 23 723 23 HOH HOH . P 6 HOH C 24 724 98 HOH HOH . P 6 HOH C 25 725 248 HOH HOH . P 6 HOH C 26 726 225 HOH HOH . P 6 HOH C 27 727 314 HOH HOH . P 6 HOH C 28 728 77 HOH HOH . P 6 HOH C 29 729 79 HOH HOH . P 6 HOH C 30 730 118 HOH HOH . P 6 HOH C 31 731 20 HOH HOH . P 6 HOH C 32 732 242 HOH HOH . P 6 HOH C 33 733 116 HOH HOH . P 6 HOH C 34 734 33 HOH HOH . P 6 HOH C 35 735 182 HOH HOH . P 6 HOH C 36 736 92 HOH HOH . P 6 HOH C 37 737 213 HOH HOH . P 6 HOH C 38 738 9 HOH HOH . P 6 HOH C 39 739 156 HOH HOH . P 6 HOH C 40 740 290 HOH HOH . P 6 HOH C 41 741 73 HOH HOH . P 6 HOH C 42 742 61 HOH HOH . P 6 HOH C 43 743 238 HOH HOH . P 6 HOH C 44 744 57 HOH HOH . P 6 HOH C 45 745 223 HOH HOH . P 6 HOH C 46 746 250 HOH HOH . P 6 HOH C 47 747 177 HOH HOH . P 6 HOH C 48 748 335 HOH HOH . P 6 HOH C 49 749 334 HOH HOH . P 6 HOH C 50 750 31 HOH HOH . Q 6 HOH D 1 501 52 HOH HOH . Q 6 HOH D 2 502 39 HOH HOH . Q 6 HOH D 3 503 6 HOH HOH . Q 6 HOH D 4 504 32 HOH HOH . Q 6 HOH D 5 505 80 HOH HOH . Q 6 HOH D 6 506 303 HOH HOH . Q 6 HOH D 7 507 103 HOH HOH . Q 6 HOH D 8 508 311 HOH HOH . Q 6 HOH D 9 509 276 HOH HOH . Q 6 HOH D 10 510 122 HOH HOH . Q 6 HOH D 11 511 302 HOH HOH . Q 6 HOH D 12 512 64 HOH HOH . Q 6 HOH D 13 513 66 HOH HOH . Q 6 HOH D 14 514 288 HOH HOH . Q 6 HOH D 15 515 58 HOH HOH . Q 6 HOH D 16 516 154 HOH HOH . Q 6 HOH D 17 517 82 HOH HOH . Q 6 HOH D 18 518 134 HOH HOH . R 6 HOH E 1 501 117 HOH HOH . R 6 HOH E 2 502 297 HOH HOH . R 6 HOH E 3 503 188 HOH HOH . R 6 HOH E 4 504 86 HOH HOH . R 6 HOH E 5 505 138 HOH HOH . R 6 HOH E 6 506 3 HOH HOH . R 6 HOH E 7 507 236 HOH HOH . R 6 HOH E 8 508 96 HOH HOH . R 6 HOH E 9 509 26 HOH HOH . R 6 HOH E 10 510 193 HOH HOH . R 6 HOH E 11 511 8 HOH HOH . R 6 HOH E 12 512 146 HOH HOH . R 6 HOH E 13 513 307 HOH HOH . R 6 HOH E 14 514 46 HOH HOH . R 6 HOH E 15 515 231 HOH HOH . R 6 HOH E 16 516 224 HOH HOH . R 6 HOH E 17 517 278 HOH HOH . R 6 HOH E 18 518 215 HOH HOH . R 6 HOH E 19 519 94 HOH HOH . R 6 HOH E 20 520 97 HOH HOH . R 6 HOH E 21 521 157 HOH HOH . R 6 HOH E 22 522 240 HOH HOH . R 6 HOH E 23 523 337 HOH HOH . S 6 HOH F 1 501 10 HOH HOH . S 6 HOH F 2 502 150 HOH HOH . S 6 HOH F 3 503 100 HOH HOH . S 6 HOH F 4 504 30 HOH HOH . S 6 HOH F 5 505 34 HOH HOH . S 6 HOH F 6 506 293 HOH HOH . S 6 HOH F 7 507 165 HOH HOH . S 6 HOH F 8 508 155 HOH HOH . S 6 HOH F 9 509 53 HOH HOH . S 6 HOH F 10 510 28 HOH HOH . S 6 HOH F 11 511 60 HOH HOH . S 6 HOH F 12 512 68 HOH HOH . S 6 HOH F 13 513 169 HOH HOH . S 6 HOH F 14 514 65 HOH HOH . S 6 HOH F 15 515 17 HOH HOH . S 6 HOH F 16 516 207 HOH HOH . S 6 HOH F 17 517 266 HOH HOH . S 6 HOH F 18 518 168 HOH HOH . S 6 HOH F 19 519 106 HOH HOH . S 6 HOH F 20 520 16 HOH HOH . S 6 HOH F 21 521 40 HOH HOH . S 6 HOH F 22 522 349 HOH HOH . S 6 HOH F 23 523 163 HOH HOH . S 6 HOH F 24 524 44 HOH HOH . S 6 HOH F 25 525 228 HOH HOH . S 6 HOH F 26 526 200 HOH HOH . S 6 HOH F 27 527 218 HOH HOH . S 6 HOH F 28 528 289 HOH HOH . S 6 HOH F 29 529 81 HOH HOH . S 6 HOH F 30 530 167 HOH HOH . S 6 HOH F 31 531 129 HOH HOH . S 6 HOH F 32 532 241 HOH HOH . S 6 HOH F 33 533 201 HOH HOH . S 6 HOH F 34 534 143 HOH HOH . S 6 HOH F 35 535 295 HOH HOH . S 6 HOH F 36 536 19 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 4.443 _atom_site.Cartn_y -3.221 _atom_site.Cartn_z -38.583 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #