data_7DQG # _model_server_result.job_id bVvetJYmS-QbCjO-4LShwQ _model_server_result.datetime_utc '2024-10-10 09:22:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dqg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7DQG # _exptl.entry_id 7DQG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7DQG _cell.length_a 68.458 _cell.length_b 68.458 _cell.length_c 218.964 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DQG _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+5/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 34.229 59.286367 182.47 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 7DQG _atom_sites.fract_transf_matrix[1][1] 0.014607 _atom_sites.fract_transf_matrix[1][2] 0.008434 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016867 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACO A 1 201 162 ACO ACO . C 3 HOH A 1 301 66 HOH HOH . C 3 HOH A 2 302 10 HOH HOH . C 3 HOH A 3 303 1 HOH HOH . C 3 HOH A 4 304 63 HOH HOH . C 3 HOH A 5 305 2 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 25 HOH HOH . C 3 HOH A 8 308 3 HOH HOH . C 3 HOH A 9 309 112 HOH HOH . C 3 HOH A 10 310 54 HOH HOH . C 3 HOH A 11 311 116 HOH HOH . C 3 HOH A 12 312 17 HOH HOH . C 3 HOH A 13 313 49 HOH HOH . C 3 HOH A 14 314 18 HOH HOH . C 3 HOH A 15 315 41 HOH HOH . C 3 HOH A 16 316 14 HOH HOH . C 3 HOH A 17 317 29 HOH HOH . C 3 HOH A 18 318 40 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 55 HOH HOH . C 3 HOH A 21 321 70 HOH HOH . C 3 HOH A 22 322 72 HOH HOH . C 3 HOH A 23 323 47 HOH HOH . C 3 HOH A 24 324 20 HOH HOH . C 3 HOH A 25 325 9 HOH HOH . C 3 HOH A 26 326 30 HOH HOH . C 3 HOH A 27 327 65 HOH HOH . C 3 HOH A 28 328 34 HOH HOH . C 3 HOH A 29 329 12 HOH HOH . C 3 HOH A 30 330 28 HOH HOH . C 3 HOH A 31 331 53 HOH HOH . C 3 HOH A 32 332 33 HOH HOH . C 3 HOH A 33 333 114 HOH HOH . C 3 HOH A 34 334 42 HOH HOH . C 3 HOH A 35 335 38 HOH HOH . C 3 HOH A 36 336 68 HOH HOH . C 3 HOH A 37 337 80 HOH HOH . C 3 HOH A 38 338 26 HOH HOH . C 3 HOH A 39 339 13 HOH HOH . C 3 HOH A 40 340 7 HOH HOH . C 3 HOH A 41 341 5 HOH HOH . C 3 HOH A 42 342 8 HOH HOH . C 3 HOH A 43 343 43 HOH HOH . C 3 HOH A 44 344 82 HOH HOH . C 3 HOH A 45 345 27 HOH HOH . C 3 HOH A 46 346 51 HOH HOH . C 3 HOH A 47 347 110 HOH HOH . C 3 HOH A 48 348 59 HOH HOH . C 3 HOH A 49 349 86 HOH HOH . C 3 HOH A 50 350 61 HOH HOH . C 3 HOH A 51 351 81 HOH HOH . C 3 HOH A 52 352 16 HOH HOH . C 3 HOH A 53 353 115 HOH HOH . C 3 HOH A 54 354 92 HOH HOH . C 3 HOH A 55 355 60 HOH HOH . C 3 HOH A 56 356 36 HOH HOH . C 3 HOH A 57 357 46 HOH HOH . C 3 HOH A 58 358 106 HOH HOH . C 3 HOH A 59 359 83 HOH HOH . C 3 HOH A 60 360 71 HOH HOH . C 3 HOH A 61 361 113 HOH HOH . C 3 HOH A 62 362 105 HOH HOH . C 3 HOH A 63 363 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . B 2 7.843 32.99 93.868 1 26.05 ? N1A ACO 201 A 1 HETATM 2 C C2A ACO . . . B 2 8.521 34.036 93.414 1 28.36 ? C2A ACO 201 A 1 HETATM 3 N N3A ACO . . . B 2 8.722 35.113 94.156 1 28.38 ? N3A ACO 201 A 1 HETATM 4 C C4A ACO . . . B 2 8.24 35.178 95.407 1 33.09 ? C4A ACO 201 A 1 HETATM 5 C C5A ACO . . . B 2 7.53 34.102 95.907 1 29.46 ? C5A ACO 201 A 1 HETATM 6 C C6A ACO . . . B 2 7.333 32.972 95.091 1 25.44 ? C6A ACO 201 A 1 HETATM 7 N N6A ACO . . . B 2 6.591 31.822 95.578 1 28.13 ? N6A ACO 201 A 1 HETATM 8 N N7A ACO . . . B 2 7.163 34.416 97.16 1 28.05 ? N7A ACO 201 A 1 HETATM 9 C C8A ACO . . . B 2 7.62 35.627 97.438 1 29.48 ? C8A ACO 201 A 1 HETATM 10 N N9A ACO . . . B 2 8.275 36.101 96.389 1 31.83 ? N9A ACO 201 A 1 HETATM 11 C C1B ACO . . . B 2 8.854 37.289 96.307 1 30.7 ? C1B ACO 201 A 1 HETATM 12 C C2B ACO . . . B 2 7.828 38.305 95.631 1 34.56 ? C2B ACO 201 A 1 HETATM 13 O O2B ACO . . . B 2 8.575 39.35 94.837 1 35.31 ? O2B ACO 201 A 1 HETATM 14 C C3B ACO . . . B 2 7.209 38.915 96.842 1 33.06 ? C3B ACO 201 A 1 HETATM 15 O O3B ACO . . . B 2 6.673 40.262 96.555 1 36.31 ? O3B ACO 201 A 1 HETATM 16 P P3B ACO . . . B 2 5.151 40.363 95.923 1 39.46 ? P3B ACO 201 A 1 HETATM 17 O O7A ACO . . . B 2 5.16 39.86 94.499 1 41.36 ? O7A ACO 201 A 1 HETATM 18 O O8A ACO . . . B 2 4.208 39.51 96.744 1 29.22 -1 O8A ACO 201 A 1 HETATM 19 O O9A ACO . . . B 2 4.69 41.801 95.947 1 37.95 ? O9A ACO 201 A 1 HETATM 20 C C4B ACO . . . B 2 8.521 38.962 97.864 1 34.87 ? C4B ACO 201 A 1 HETATM 21 O O4B ACO . . . B 2 9.161 37.859 97.693 1 30.96 ? O4B ACO 201 A 1 HETATM 22 C C5B ACO . . . B 2 8.054 39.081 99.298 1 27.76 ? C5B ACO 201 A 1 HETATM 23 O O5B ACO . . . B 2 6.959 38.223 99.457 1 30.9 ? O5B ACO 201 A 1 HETATM 24 P P1A ACO . . . B 2 6.459 37.788 100.969 1 25.52 ? P1A ACO 201 A 1 HETATM 25 O O1A ACO . . . B 2 7.143 38.632 102.021 1 23.33 -1 O1A ACO 201 A 1 HETATM 26 O O2A ACO . . . B 2 4.962 37.962 101.071 1 25.09 ? O2A ACO 201 A 1 HETATM 27 O O3A ACO . . . B 2 6.849 36.209 101.211 1 23.94 ? O3A ACO 201 A 1 HETATM 28 P P2A ACO . . . B 2 5.88 35.129 101.982 1 23.12 ? P2A ACO 201 A 1 HETATM 29 O O4A ACO . . . B 2 4.786 34.655 101.057 1 24.33 -1 O4A ACO 201 A 1 HETATM 30 O O5A ACO . . . B 2 5.27 35.784 103.198 1 21.36 ? O5A ACO 201 A 1 HETATM 31 O O6A ACO . . . B 2 6.818 33.856 102.445 1 25.67 ? O6A ACO 201 A 1 HETATM 32 C CBP ACO . . . B 2 8.121 31.98 101.88 1 26.5 ? CBP ACO 201 A 1 HETATM 33 C CCP ACO . . . B 2 7.88 33.464 101.619 1 20.73 ? CCP ACO 201 A 1 HETATM 34 C CDP ACO . . . B 2 8.682 31.818 103.293 1 24.79 ? CDP ACO 201 A 1 HETATM 35 C CEP ACO . . . B 2 9.119 31.439 100.859 1 21.51 ? CEP ACO 201 A 1 HETATM 36 C CAP ACO . . . B 2 6.773 31.269 101.73 1 24.42 ? CAP ACO 201 A 1 HETATM 37 O OAP ACO . . . B 2 6.419 31.267 100.377 1 27.22 ? OAP ACO 201 A 1 HETATM 38 C C9P ACO . . . B 2 6.784 29.822 102.23 1 25.76 ? C9P ACO 201 A 1 HETATM 39 O O9P ACO . . . B 2 6.523 29.578 103.364 1 26.36 ? O9P ACO 201 A 1 HETATM 40 N N8P ACO . . . B 2 7.084 28.748 101.296 1 24.34 ? N8P ACO 201 A 1 HETATM 41 C C7P ACO . . . B 2 7.089 27.358 101.722 1 22.79 ? C7P ACO 201 A 1 HETATM 42 C C6P ACO . . . B 2 8.186 27.092 102.751 1 25.13 ? C6P ACO 201 A 1 HETATM 43 C C5P ACO . . . B 2 9.578 27.429 102.219 1 31.71 ? C5P ACO 201 A 1 HETATM 44 O O5P ACO . . . B 2 9.899 27.081 101.13 1 29.6 ? O5P ACO 201 A 1 HETATM 45 N N4P ACO . . . B 2 10.504 28.175 103.052 1 24.25 ? N4P ACO 201 A 1 HETATM 46 C C3P ACO . . . B 2 11.83 28.474 102.543 1 24.72 ? C3P ACO 201 A 1 HETATM 47 C C2P ACO . . . B 2 12.709 27.246 102.794 1 26.87 ? C2P ACO 201 A 1 HETATM 48 S S1P ACO . . . B 2 14.474 27.618 102.568 1 26.86 ? S1P ACO 201 A 1 HETATM 49 C C ACO . . . B 2 15.11 28.526 104.008 1 32.68 ? C ACO 201 A 1 HETATM 50 O O ACO . . . B 2 16.271 28.749 104.114 1 34.25 ? O ACO 201 A 1 HETATM 51 C CH3 ACO . . . B 2 14.145 29.004 105.086 1 15.76 ? CH3 ACO 201 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 51 #