data_7DQH # _model_server_result.job_id -U7RJN4dC-f9Hbte2GEkqQ _model_server_result.datetime_utc '2024-10-11 02:19:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dqh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7DQH # _exptl.entry_id 7DQH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 133.151 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1H-benzimidazol-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DQH _cell.length_a 61.517 _cell.length_b 67.646 _cell.length_c 102.28 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DQH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H7 N3' _chem_comp.formula_weight 133.151 _chem_comp.id AX7 _chem_comp.mon_nstd_flag . _chem_comp.name 1H-benzimidazol-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAF CAI AX7 sing 70 n y NAF CAH AX7 sing 71 n y CAI CAD AX7 doub 72 n y CAI CAJ AX7 sing 73 n y CAD CAB AX7 sing 74 n y CAB CAC AX7 doub 75 n y CAC CAE AX7 sing 76 n y CAE CAJ AX7 doub 77 n y CAJ NAG AX7 sing 78 n y NAG CAH AX7 doub 79 n y CAH NAA AX7 sing 80 n n NAF HNAF AX7 sing 81 n n CAD HAD AX7 sing 82 n n CAB HAB AX7 sing 83 n n CAC HAC AX7 sing 84 n n CAE HAE AX7 sing 85 n n NAA HNAA AX7 sing 86 n n NAA HNAB AX7 sing 87 n n # _atom_sites.entry_id 7DQH _atom_sites.fract_transf_matrix[1][1] 0.016256 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014783 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009777 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AX7 A 1 301 1 AX7 M68 . D 3 OHB A 1 302 1 OHB 106 . E 4 PO4 A 1 303 1 PO4 PO4 . F 4 PO4 A 1 304 2 PO4 PO4 . G 3 OHB B 1 301 2 OHB 106 . H 4 PO4 B 1 302 3 PO4 PO4 . I 5 HOH A 1 401 50 HOH HOH . I 5 HOH A 2 402 154 HOH HOH . I 5 HOH A 3 403 106 HOH HOH . I 5 HOH A 4 404 48 HOH HOH . I 5 HOH A 5 405 55 HOH HOH . I 5 HOH A 6 406 70 HOH HOH . I 5 HOH A 7 407 71 HOH HOH . I 5 HOH A 8 408 97 HOH HOH . I 5 HOH A 9 409 30 HOH HOH . I 5 HOH A 10 410 78 HOH HOH . I 5 HOH A 11 411 150 HOH HOH . I 5 HOH A 12 412 83 HOH HOH . I 5 HOH A 13 413 57 HOH HOH . I 5 HOH A 14 414 69 HOH HOH . I 5 HOH A 15 415 156 HOH HOH . I 5 HOH A 16 416 61 HOH HOH . I 5 HOH A 17 417 65 HOH HOH . I 5 HOH A 18 418 105 HOH HOH . I 5 HOH A 19 419 27 HOH HOH . I 5 HOH A 20 420 53 HOH HOH . I 5 HOH A 21 421 64 HOH HOH . I 5 HOH A 22 422 92 HOH HOH . I 5 HOH A 23 423 52 HOH HOH . I 5 HOH A 24 424 10 HOH HOH . I 5 HOH A 25 425 12 HOH HOH . I 5 HOH A 26 426 68 HOH HOH . I 5 HOH A 27 427 98 HOH HOH . I 5 HOH A 28 428 84 HOH HOH . I 5 HOH A 29 429 110 HOH HOH . I 5 HOH A 30 430 107 HOH HOH . I 5 HOH A 31 431 75 HOH HOH . I 5 HOH A 32 432 109 HOH HOH . I 5 HOH A 33 433 51 HOH HOH . I 5 HOH A 34 434 63 HOH HOH . I 5 HOH A 35 435 15 HOH HOH . I 5 HOH A 36 436 24 HOH HOH . I 5 HOH A 37 437 1 HOH HOH . I 5 HOH A 38 438 8 HOH HOH . I 5 HOH A 39 439 81 HOH HOH . I 5 HOH A 40 440 101 HOH HOH . I 5 HOH A 41 441 86 HOH HOH . I 5 HOH A 42 442 14 HOH HOH . I 5 HOH A 43 443 22 HOH HOH . I 5 HOH A 44 444 169 HOH HOH . I 5 HOH A 45 445 62 HOH HOH . I 5 HOH A 46 446 47 HOH HOH . I 5 HOH A 47 447 90 HOH HOH . I 5 HOH A 48 448 16 HOH HOH . I 5 HOH A 49 449 13 HOH HOH . I 5 HOH A 50 450 18 HOH HOH . I 5 HOH A 51 451 60 HOH HOH . I 5 HOH A 52 452 39 HOH HOH . I 5 HOH A 53 453 74 HOH HOH . I 5 HOH A 54 454 89 HOH HOH . I 5 HOH A 55 455 42 HOH HOH . I 5 HOH A 56 456 157 HOH HOH . I 5 HOH A 57 457 111 HOH HOH . I 5 HOH A 58 458 100 HOH HOH . I 5 HOH A 59 459 54 HOH HOH . I 5 HOH A 60 460 151 HOH HOH . I 5 HOH A 61 461 108 HOH HOH . I 5 HOH A 62 462 67 HOH HOH . I 5 HOH A 63 463 99 HOH HOH . I 5 HOH A 64 464 96 HOH HOH . I 5 HOH A 65 465 158 HOH HOH . I 5 HOH A 66 466 66 HOH HOH . I 5 HOH A 67 467 91 HOH HOH . I 5 HOH A 68 468 73 HOH HOH . I 5 HOH A 69 469 76 HOH HOH . I 5 HOH A 70 470 88 HOH HOH . I 5 HOH A 71 471 72 HOH HOH . I 5 HOH A 72 472 153 HOH HOH . I 5 HOH A 73 473 80 HOH HOH . I 5 HOH A 74 474 170 HOH HOH . I 5 HOH A 75 475 145 HOH HOH . I 5 HOH A 76 476 168 HOH HOH . I 5 HOH A 77 477 103 HOH HOH . I 5 HOH A 78 478 25 HOH HOH . I 5 HOH A 79 479 120 HOH HOH . I 5 HOH A 80 480 104 HOH HOH . I 5 HOH A 81 481 82 HOH HOH . I 5 HOH A 82 482 93 HOH HOH . J 5 HOH B 1 401 123 HOH HOH . J 5 HOH B 2 402 129 HOH HOH . J 5 HOH B 3 403 132 HOH HOH . J 5 HOH B 4 404 149 HOH HOH . J 5 HOH B 5 405 122 HOH HOH . J 5 HOH B 6 406 23 HOH HOH . J 5 HOH B 7 407 102 HOH HOH . J 5 HOH B 8 408 130 HOH HOH . J 5 HOH B 9 409 162 HOH HOH . J 5 HOH B 10 410 159 HOH HOH . J 5 HOH B 11 411 113 HOH HOH . J 5 HOH B 12 412 115 HOH HOH . J 5 HOH B 13 413 128 HOH HOH . J 5 HOH B 14 414 112 HOH HOH . J 5 HOH B 15 415 17 HOH HOH . J 5 HOH B 16 416 172 HOH HOH . J 5 HOH B 17 417 134 HOH HOH . J 5 HOH B 18 418 7 HOH HOH . J 5 HOH B 19 419 131 HOH HOH . J 5 HOH B 20 420 20 HOH HOH . J 5 HOH B 21 421 56 HOH HOH . J 5 HOH B 22 422 4 HOH HOH . J 5 HOH B 23 423 11 HOH HOH . J 5 HOH B 24 424 116 HOH HOH . J 5 HOH B 25 425 141 HOH HOH . J 5 HOH B 26 426 140 HOH HOH . J 5 HOH B 27 427 142 HOH HOH . J 5 HOH B 28 428 21 HOH HOH . J 5 HOH B 29 429 136 HOH HOH . J 5 HOH B 30 430 167 HOH HOH . J 5 HOH B 31 431 9 HOH HOH . J 5 HOH B 32 432 40 HOH HOH . J 5 HOH B 33 433 41 HOH HOH . J 5 HOH B 34 434 36 HOH HOH . J 5 HOH B 35 435 19 HOH HOH . J 5 HOH B 36 436 148 HOH HOH . J 5 HOH B 37 437 3 HOH HOH . J 5 HOH B 38 438 33 HOH HOH . J 5 HOH B 39 439 58 HOH HOH . J 5 HOH B 40 440 46 HOH HOH . J 5 HOH B 41 441 28 HOH HOH . J 5 HOH B 42 442 38 HOH HOH . J 5 HOH B 43 443 37 HOH HOH . J 5 HOH B 44 444 121 HOH HOH . J 5 HOH B 45 445 139 HOH HOH . J 5 HOH B 46 446 29 HOH HOH . J 5 HOH B 47 447 135 HOH HOH . J 5 HOH B 48 448 124 HOH HOH . J 5 HOH B 49 449 126 HOH HOH . J 5 HOH B 50 450 35 HOH HOH . J 5 HOH B 51 451 32 HOH HOH . J 5 HOH B 52 452 117 HOH HOH . J 5 HOH B 53 453 34 HOH HOH . J 5 HOH B 54 454 161 HOH HOH . J 5 HOH B 55 455 166 HOH HOH . J 5 HOH B 56 456 6 HOH HOH . J 5 HOH B 57 457 5 HOH HOH . J 5 HOH B 58 458 152 HOH HOH . J 5 HOH B 59 459 95 HOH HOH . J 5 HOH B 60 460 45 HOH HOH . J 5 HOH B 61 461 118 HOH HOH . J 5 HOH B 62 462 26 HOH HOH . J 5 HOH B 63 463 133 HOH HOH . J 5 HOH B 64 464 44 HOH HOH . J 5 HOH B 65 465 138 HOH HOH . J 5 HOH B 66 466 147 HOH HOH . J 5 HOH B 67 467 174 HOH HOH . J 5 HOH B 68 468 31 HOH HOH . J 5 HOH B 69 469 160 HOH HOH . J 5 HOH B 70 470 137 HOH HOH . J 5 HOH B 71 471 114 HOH HOH . J 5 HOH B 72 472 59 HOH HOH . J 5 HOH B 73 473 173 HOH HOH . J 5 HOH B 74 474 127 HOH HOH . J 5 HOH B 75 475 171 HOH HOH . J 5 HOH B 76 476 164 HOH HOH . J 5 HOH B 77 477 119 HOH HOH . J 5 HOH B 78 478 43 HOH HOH . J 5 HOH B 79 479 163 HOH HOH . J 5 HOH B 80 480 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N NAF AX7 . . . C 2 18.039 -0.006 12.581 1 34.61 ? NAF AX7 301 A 1 HETATM 2 C CAI AX7 . . . C 2 17.016 0.808 13.026 1 31.82 ? CAI AX7 301 A 1 HETATM 3 C CAD AX7 . . . C 2 16.308 1.799 12.348 1 32.49 ? CAD AX7 301 A 1 HETATM 4 C CAB AX7 . . . C 2 15.254 2.415 12.99 1 32.66 ? CAB AX7 301 A 1 HETATM 5 C CAC AX7 . . . C 2 14.933 2.085 14.302 1 30.8 ? CAC AX7 301 A 1 HETATM 6 C CAE AX7 . . . C 2 15.643 1.117 14.987 1 28.6 ? CAE AX7 301 A 1 HETATM 7 C CAJ AX7 . . . C 2 16.666 0.471 14.323 1 32.86 ? CAJ AX7 301 A 1 HETATM 8 N NAG AX7 . . . C 2 17.485 -0.597 14.67 1 35.2 ? NAG AX7 301 A 1 HETATM 9 C CAH AX7 . . . C 2 18.285 -0.828 13.601 1 35.56 ? CAH AX7 301 A 1 HETATM 10 N NAA AX7 . . . C 2 19.243 -1.756 13.596 1 37.59 ? NAA AX7 301 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #