data_7DQX # _model_server_result.job_id Gsple9XYtna4MSoMj7nrrQ _model_server_result.datetime_utc '2025-08-05 06:35:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dqx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 7DQX # _exptl.entry_id 7DQX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DQX _cell.length_a 112.86 _cell.length_b 126.792 _cell.length_c 294.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DQX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G S8' MCN . A MCN 801 1_555 H MO MO . A MO 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 G S7' MCN . A MCN 801 1_555 H MO MO . A MO 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc3 C SG CYS 42 C CYS 42 1_555 J FE2 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc4 C SG CYS 47 C CYS 47 1_555 J FE2 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc5 C SG CYS 50 C CYS 50 1_555 J FE1 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc6 C SG CYS 62 C CYS 62 1_555 J FE1 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc7 C SG CYS 101 C CYS 101 1_555 K FE2 FES . C FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc8 C SG CYS 104 C CYS 104 1_555 K FE1 FES . C FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc9 C SG CYS 137 C CYS 137 1_555 K FE1 FES . C FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc10 C SG CYS 139 C CYS 139 1_555 K FE2 FES . C FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc11 E SG CYS 42 F CYS 42 1_555 M FE2 FES . F FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc12 E SG CYS 47 F CYS 47 1_555 M FE2 FES . F FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc13 E SG CYS 50 F CYS 50 1_555 M FE1 FES . F FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc14 E SG CYS 62 F CYS 62 1_555 M FE1 FES . F FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc15 E SG CYS 101 F CYS 101 1_555 N FE2 FES . F FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc16 E SG CYS 104 F CYS 104 1_555 N FE1 FES . F FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc17 E SG CYS 137 F CYS 137 1_555 N FE1 FES . F FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc18 E SG CYS 139 F CYS 139 1_555 N FE2 FES . F FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc19 O S8' MCN . D MCN 801 1_555 P MO MO . D MO 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc20 O S7' MCN . D MCN 801 1_555 P MO MO . D MO 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 7DQX _atom_sites.fract_transf_matrix[1][1] 0.008861 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003396 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 MCN A 1 801 801 MCN MCN . H 6 MO A 1 802 802 MO MO . I 7 FAD B 1 301 301 FAD FAD . J 8 FES C 1 201 201 FES FES . K 8 FES C 1 202 202 FES FES . L 7 FAD E 1 301 301 FAD FAD . M 8 FES F 1 201 201 FES FES . N 8 FES F 1 202 202 FES FES . O 5 MCN D 1 801 801 MCN MCN . P 6 MO D 1 802 802 MO MO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . I 7 124.571 167.088 17.025 1 59.81 ? PA FAD 301 B 1 HETATM 2 O O1A FAD . . . I 7 125.224 167.702 18.24 1 59.54 ? O1A FAD 301 B 1 HETATM 3 O O2A FAD . . . I 7 125.124 165.8 16.484 1 57.75 ? O2A FAD 301 B 1 HETATM 4 O O5B FAD . . . I 7 122.989 166.895 17.293 1 61.5 ? O5B FAD 301 B 1 HETATM 5 C C5B FAD . . . I 7 122.278 167.772 18.171 1 61.23 ? C5B FAD 301 B 1 HETATM 6 C C4B FAD . . . I 7 122.744 169.197 17.905 1 65 ? C4B FAD 301 B 1 HETATM 7 O O4B FAD . . . I 7 121.955 169.771 16.866 1 66.57 ? O4B FAD 301 B 1 HETATM 8 C C3B FAD . . . I 7 122.647 170.08 19.14 1 66.51 ? C3B FAD 301 B 1 HETATM 9 O O3B FAD . . . I 7 123.963 170.582 19.468 1 67.55 ? O3B FAD 301 B 1 HETATM 10 C C2B FAD . . . I 7 121.734 171.218 18.712 1 67.44 ? C2B FAD 301 B 1 HETATM 11 O O2B FAD . . . I 7 122.237 172.483 19.156 1 68.34 ? O2B FAD 301 B 1 HETATM 12 C C1B FAD . . . I 7 121.756 171.142 17.194 1 67.89 ? C1B FAD 301 B 1 HETATM 13 N N9A FAD . . . I 7 120.542 171.708 16.555 1 69.83 ? N9A FAD 301 B 1 HETATM 14 C C8A FAD . . . I 7 119.9 172.813 16.98 1 70.88 ? C8A FAD 301 B 1 HETATM 15 N N7A FAD . . . I 7 118.842 173.103 16.188 1 71.67 ? N7A FAD 301 B 1 HETATM 16 C C5A FAD . . . I 7 118.809 172.172 15.223 1 70.73 ? C5A FAD 301 B 1 HETATM 17 C C6A FAD . . . I 7 117.94 171.894 14.063 1 70.31 ? C6A FAD 301 B 1 HETATM 18 N N6A FAD . . . I 7 116.898 172.712 13.815 1 70.77 ? N6A FAD 301 B 1 HETATM 19 N N1A FAD . . . I 7 118.214 170.817 13.289 1 69.7 ? N1A FAD 301 B 1 HETATM 20 C C2A FAD . . . I 7 119.258 170.008 13.559 1 69.1 ? C2A FAD 301 B 1 HETATM 21 N N3A FAD . . . I 7 120.09 170.203 14.603 1 68.75 ? N3A FAD 301 B 1 HETATM 22 C C4A FAD . . . I 7 119.926 171.248 15.459 1 69.67 ? C4A FAD 301 B 1 HETATM 23 N N1 FAD . . . I 7 132.588 170.142 13.411 1 58.5 ? N1 FAD 301 B 1 HETATM 24 C C2 FAD . . . I 7 133.104 171.021 12.511 1 59.73 ? C2 FAD 301 B 1 HETATM 25 O O2 FAD . . . I 7 132.333 171.833 11.957 1 57.34 ? O2 FAD 301 B 1 HETATM 26 N N3 FAD . . . I 7 134.413 171.051 12.195 1 58.94 ? N3 FAD 301 B 1 HETATM 27 C C4 FAD . . . I 7 135.296 170.21 12.749 1 59.12 ? C4 FAD 301 B 1 HETATM 28 O O4 FAD . . . I 7 136.506 170.26 12.437 1 59.27 ? O4 FAD 301 B 1 HETATM 29 C C4X FAD . . . I 7 134.808 169.218 13.742 1 58.63 ? C4X FAD 301 B 1 HETATM 30 N N5 FAD . . . I 7 135.652 168.346 14.335 1 59.19 ? N5 FAD 301 B 1 HETATM 31 C C5X FAD . . . I 7 135.202 167.448 15.238 1 59.61 ? C5X FAD 301 B 1 HETATM 32 C C6 FAD . . . I 7 136.1 166.567 15.829 1 60.35 ? C6 FAD 301 B 1 HETATM 33 C C7 FAD . . . I 7 135.656 165.632 16.758 1 62.41 ? C7 FAD 301 B 1 HETATM 34 C C7M FAD . . . I 7 136.666 164.698 17.368 1 59.36 ? C7M FAD 301 B 1 HETATM 35 C C8 FAD . . . I 7 134.209 165.575 17.129 1 61.42 ? C8 FAD 301 B 1 HETATM 36 C C8M FAD . . . I 7 133.687 164.579 18.134 1 60.98 ? C8M FAD 301 B 1 HETATM 37 C C9 FAD . . . I 7 133.313 166.459 16.538 1 60.52 ? C9 FAD 301 B 1 HETATM 38 C C9A FAD . . . I 7 133.753 167.396 15.604 1 60 ? C9A FAD 301 B 1 HETATM 39 N N10 FAD . . . I 7 132.841 168.294 15.002 1 59.61 ? N10 FAD 301 B 1 HETATM 40 C C10 FAD . . . I 7 133.353 169.226 14.055 1 58.79 ? C10 FAD 301 B 1 HETATM 41 C C1' FAD . . . I 7 131.428 168.196 15.414 1 58.69 ? C1' FAD 301 B 1 HETATM 42 C C2' FAD . . . I 7 130.462 169.027 14.584 1 61.09 ? C2' FAD 301 B 1 HETATM 43 O O2' FAD . . . I 7 129.796 169.985 15.421 1 57.6 ? O2' FAD 301 B 1 HETATM 44 C C3' FAD . . . I 7 129.495 168.086 13.878 1 58.5 ? C3' FAD 301 B 1 HETATM 45 O O3' FAD . . . I 7 129.781 168.15 12.477 1 58.96 ? O3' FAD 301 B 1 HETATM 46 C C4' FAD . . . I 7 128.023 168.397 14.122 1 58.77 ? C4' FAD 301 B 1 HETATM 47 O O4' FAD . . . I 7 127.732 168.407 15.525 1 58.59 ? O4' FAD 301 B 1 HETATM 48 C C5' FAD . . . I 7 127.189 167.326 13.439 1 58.54 ? C5' FAD 301 B 1 HETATM 49 O O5' FAD . . . I 7 126.183 166.834 14.317 1 59.47 ? O5' FAD 301 B 1 HETATM 50 P P FAD . . . I 7 124.726 167.513 14.309 1 60.03 ? P FAD 301 B 1 HETATM 51 O O1P FAD . . . I 7 124.755 168.641 13.316 1 61.24 ? O1P FAD 301 B 1 HETATM 52 O O2P FAD . . . I 7 123.699 166.419 14.151 1 58.3 ? O2P FAD 301 B 1 HETATM 53 O O3P FAD . . . I 7 124.619 168.122 15.794 1 60.25 ? O3P FAD 301 B 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 121 _model_server_stats.query_time_ms 482 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 53 #