data_7DRK # _model_server_result.job_id uNdapX3YbVCQDAod59cuYQ _model_server_result.datetime_utc '2024-11-29 17:48:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7drk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7DRK # _exptl.entry_id 7DRK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.66 _cell.angle_gamma 90 _cell.entry_id 7DRK _cell.length_a 127.781 _cell.length_b 59.432 _cell.length_c 73.027 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DRK _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 N N N ? 2 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 77 A ASP 57 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc2 A OD1 ASP 77 A ASP 57 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc3 A OD1 ASP 77 A ASP 57 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc4 A OD2 ASP 77 A ASP 57 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc5 A OD1 ASP 80 A ASP 60 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc6 A OD2 ASP 80 A ASP 60 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc7 A OD2 ASP 98 A ASP 78 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc8 A OD1 ASP 98 A ASP 78 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc9 A OD1 ASP 102 A ASP 82 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc10 A OD2 ASP 102 A ASP 82 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc11 C ZN ZN . A ZN 201 1_555 E OAT 58A . A 58A 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc12 D ZN ZN . A ZN 202 1_555 E OAX 58A . A 58A 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc13 B O ASP 77 B ASP 57 1_555 N ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc14 B OD1 ASP 77 B ASP 57 1_555 N ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? metalc ? metalc15 B OD1 ASP 77 B ASP 57 1_555 O ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc16 B OD2 ASP 77 B ASP 57 1_555 O ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc17 B OD1 ASP 80 B ASP 60 1_555 N ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc18 B OD2 ASP 80 B ASP 60 1_555 N ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc19 B OD2 ASP 98 B ASP 78 1_555 N ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc20 B OD1 ASP 98 B ASP 78 1_555 O ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc21 B OD2 ASP 102 B ASP 82 1_555 O ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc22 N ZN ZN . B ZN 201 1_555 P OAS 58A . B 58A 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc23 O ZN ZN . B ZN 202 1_555 P OAX 58A . B 58A 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DRK _atom_sites.fract_transf_matrix[1][1] 0.007826 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002341 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016826 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 201 201 ZN ZN . D 2 ZN A 1 202 301 ZN ZN . E 3 58A A 1 203 401 58A 58A . F 4 G3P A 1 204 1401 G3P G3P . G 5 OLC A 1 205 1601 OLC OLC . H 6 BU1 A 1 206 34 BU1 BU1 . I 4 G3P A 1 207 1 G3P G3P . J 4 G3P A 1 208 4 G3P G3P . K 4 G3P A 1 209 6 G3P G3P . L 7 ACY A 1 210 1 ACY ACY . M 7 ACY A 1 211 2 ACY ACY . N 2 ZN B 1 201 201 ZN ZN . O 2 ZN B 1 202 301 ZN ZN . P 3 58A B 1 203 501 58A 58A . Q 6 BU1 B 1 204 1101 BU1 BU1 . R 5 OLC B 1 205 1301 OLC OLC . S 5 OLC B 1 206 1901 OLC OLC . T 6 BU1 B 1 207 18 BU1 BU1 . U 6 BU1 B 1 208 24 BU1 BU1 . V 6 BU1 B 1 209 35 BU1 BU1 . W 6 BU1 B 1 210 36 BU1 BU1 . X 6 BU1 B 1 211 37 BU1 BU1 . Y 6 BU1 B 1 212 2 BU1 BU1 . Z 6 BU1 B 1 213 6 BU1 BU1 . AA 6 BU1 B 1 214 10 BU1 BU1 . BA 4 G3P B 1 215 2 G3P G3P . CA 8 HOH A 1 301 117 HOH HOH . CA 8 HOH A 2 302 29 HOH HOH . CA 8 HOH A 3 303 33 HOH HOH . CA 8 HOH A 4 304 77 HOH HOH . CA 8 HOH A 5 305 133 HOH HOH . CA 8 HOH A 6 306 18 HOH HOH . CA 8 HOH A 7 307 86 HOH HOH . CA 8 HOH A 8 308 10 HOH HOH . CA 8 HOH A 9 309 109 HOH HOH . CA 8 HOH A 10 310 80 HOH HOH . CA 8 HOH A 11 311 47 HOH HOH . CA 8 HOH A 12 312 85 HOH HOH . CA 8 HOH A 13 313 123 HOH HOH . CA 8 HOH A 14 314 16 HOH HOH . CA 8 HOH A 15 315 67 HOH HOH . CA 8 HOH A 16 316 38 HOH HOH . CA 8 HOH A 17 317 27 HOH HOH . CA 8 HOH A 18 318 118 HOH HOH . CA 8 HOH A 19 319 14 HOH HOH . CA 8 HOH A 20 320 130 HOH HOH . CA 8 HOH A 21 321 101 HOH HOH . CA 8 HOH A 22 322 5 HOH HOH . CA 8 HOH A 23 323 2 HOH HOH . CA 8 HOH A 24 324 145 HOH HOH . CA 8 HOH A 25 325 74 HOH HOH . CA 8 HOH A 26 326 58 HOH HOH . CA 8 HOH A 27 327 114 HOH HOH . CA 8 HOH A 28 328 140 HOH HOH . CA 8 HOH A 29 329 71 HOH HOH . CA 8 HOH A 30 330 136 HOH HOH . CA 8 HOH A 31 331 108 HOH HOH . CA 8 HOH A 32 332 65 HOH HOH . CA 8 HOH A 33 333 94 HOH HOH . CA 8 HOH A 34 334 113 HOH HOH . CA 8 HOH A 35 335 31 HOH HOH . CA 8 HOH A 36 336 35 HOH HOH . CA 8 HOH A 37 337 11 HOH HOH . CA 8 HOH A 38 338 23 HOH HOH . CA 8 HOH A 39 339 9 HOH HOH . CA 8 HOH A 40 340 41 HOH HOH . CA 8 HOH A 41 341 87 HOH HOH . CA 8 HOH A 42 342 69 HOH HOH . CA 8 HOH A 43 343 83 HOH HOH . CA 8 HOH A 44 344 88 HOH HOH . CA 8 HOH A 45 345 32 HOH HOH . CA 8 HOH A 46 346 84 HOH HOH . CA 8 HOH A 47 347 50 HOH HOH . CA 8 HOH A 48 348 95 HOH HOH . CA 8 HOH A 49 349 44 HOH HOH . CA 8 HOH A 50 350 59 HOH HOH . CA 8 HOH A 51 351 21 HOH HOH . CA 8 HOH A 52 352 53 HOH HOH . DA 8 HOH B 1 301 124 HOH HOH . DA 8 HOH B 2 302 112 HOH HOH . DA 8 HOH B 3 303 134 HOH HOH . DA 8 HOH B 4 304 12 HOH HOH . DA 8 HOH B 5 305 66 HOH HOH . DA 8 HOH B 6 306 4 HOH HOH . DA 8 HOH B 7 307 56 HOH HOH . DA 8 HOH B 8 308 81 HOH HOH . DA 8 HOH B 9 309 129 HOH HOH . DA 8 HOH B 10 310 111 HOH HOH . DA 8 HOH B 11 311 128 HOH HOH . DA 8 HOH B 12 312 25 HOH HOH . DA 8 HOH B 13 313 62 HOH HOH . DA 8 HOH B 14 314 43 HOH HOH . DA 8 HOH B 15 315 110 HOH HOH . DA 8 HOH B 16 316 100 HOH HOH . DA 8 HOH B 17 317 91 HOH HOH . DA 8 HOH B 18 318 8 HOH HOH . DA 8 HOH B 19 319 131 HOH HOH . DA 8 HOH B 20 320 60 HOH HOH . DA 8 HOH B 21 321 98 HOH HOH . DA 8 HOH B 22 322 19 HOH HOH . DA 8 HOH B 23 323 115 HOH HOH . DA 8 HOH B 24 324 51 HOH HOH . DA 8 HOH B 25 325 137 HOH HOH . DA 8 HOH B 26 326 36 HOH HOH . DA 8 HOH B 27 327 119 HOH HOH . DA 8 HOH B 28 328 13 HOH HOH . DA 8 HOH B 29 329 73 HOH HOH . DA 8 HOH B 30 330 116 HOH HOH . DA 8 HOH B 31 331 125 HOH HOH . DA 8 HOH B 32 332 82 HOH HOH . DA 8 HOH B 33 333 106 HOH HOH . DA 8 HOH B 34 334 63 HOH HOH . DA 8 HOH B 35 335 48 HOH HOH . DA 8 HOH B 36 336 54 HOH HOH . DA 8 HOH B 37 337 57 HOH HOH . DA 8 HOH B 38 338 72 HOH HOH . DA 8 HOH B 39 339 141 HOH HOH . DA 8 HOH B 40 340 102 HOH HOH . DA 8 HOH B 41 341 6 HOH HOH . DA 8 HOH B 42 342 79 HOH HOH . DA 8 HOH B 43 343 20 HOH HOH . DA 8 HOH B 44 344 97 HOH HOH . DA 8 HOH B 45 345 99 HOH HOH . DA 8 HOH B 46 346 103 HOH HOH . DA 8 HOH B 47 347 42 HOH HOH . DA 8 HOH B 48 348 105 HOH HOH . DA 8 HOH B 49 349 22 HOH HOH . DA 8 HOH B 50 350 90 HOH HOH . DA 8 HOH B 51 351 17 HOH HOH . DA 8 HOH B 52 352 138 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -28.603 _atom_site.Cartn_y 3.662 _atom_site.Cartn_z 35.04 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #