data_7DRN
#
_model_server_result.job_id            kSVJuuoAinGkl9vuSSQlMA 
_model_server_result.datetime_utc      '2024-12-02 17:04:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7drn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":401}' 
#
_entry.id    7DRN 
#
_exptl.entry_id    7DRN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.9 
_cell.angle_gamma         90 
_cell.entry_id            7DRN 
_cell.length_a            92.294 
_cell.length_b            92.647 
_cell.length_c            99.571 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DRN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G 1 1 
C,D,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     7DRN 
_atom_sites.fract_transf_matrix[1][1]    0.010835 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002086 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010794 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010228 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 ANP A 1 401 402 ANP ANP . 
H 3 ANP C 1 401 401 ANP ANP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . H 3 -23.809 27.201 3.844 1 80.23 ? PG ANP 401 C 1 
HETATM 2 O O1G ANP . . . H 3 -25.15 26.526 3.738 1 81.13 ? O1G ANP 401 C 1 
HETATM 3 O O2G ANP . . . H 3 -23.366 27.499 5.252 1 80.02 ? O2G ANP 401 C 1 
HETATM 4 O O3G ANP . . . H 3 -23.638 28.378 2.923 1 78.89 ? O3G ANP 401 C 1 
HETATM 5 P PB ANP . . . H 3 -22.073 26.041 1.672 1 77.45 ? PB ANP 401 C 1 
HETATM 6 O O1B ANP . . . H 3 -21.487 24.687 1.386 1 75.86 ? O1B ANP 401 C 1 
HETATM 7 O O2B ANP . . . H 3 -23.157 26.528 0.75 1 77.96 ? O2B ANP 401 C 1 
HETATM 8 N N3B ANP . . . H 3 -22.697 25.979 3.294 1 78.73 ? N3B ANP 401 C 1 
HETATM 9 P PA ANP . . . H 3 -20.719 28.19 0.499 1 72.09 ? PA ANP 401 C 1 
HETATM 10 O O1A ANP . . . H 3 -21.845 29.173 0.617 1 72.83 -1 O1A ANP 401 C 1 
HETATM 11 O O2A ANP . . . H 3 -20.446 27.47 -0.788 1 70.86 ? O2A ANP 401 C 1 
HETATM 12 O O3A ANP . . . H 3 -20.863 27.097 1.661 1 75.06 ? O3A ANP 401 C 1 
HETATM 13 O O5' ANP . . . H 3 -19.389 28.98 0.891 1 70.85 ? O5' ANP 401 C 1 
HETATM 14 C C5' ANP . . . H 3 -19.372 29.9 1.967 1 71.29 ? C5' ANP 401 C 1 
HETATM 15 C C4' ANP . . . H 3 -17.95 29.978 2.48 1 70.35 ? C4' ANP 401 C 1 
HETATM 16 O O4' ANP . . . H 3 -17.316 28.709 2.35 1 69.74 ? O4' ANP 401 C 1 
HETATM 17 C C3' ANP . . . H 3 -17.102 30.955 1.697 1 70 ? C3' ANP 401 C 1 
HETATM 18 O O3' ANP . . . H 3 -17.105 32.233 2.319 1 70.81 ? O3' ANP 401 C 1 
HETATM 19 C C2' ANP . . . H 3 -15.729 30.351 1.728 1 69.69 ? C2' ANP 401 C 1 
HETATM 20 O O2' ANP . . . H 3 -14.968 30.934 2.779 1 70.95 ? O2' ANP 401 C 1 
HETATM 21 C C1' ANP . . . H 3 -15.939 28.88 2.019 1 69.24 ? C1' ANP 401 C 1 
HETATM 22 N N9 ANP . . . H 3 -15.559 28.084 0.834 1 68.49 ? N9 ANP 401 C 1 
HETATM 23 C C8 ANP . . . H 3 -16.374 27.509 -0.068 1 68.54 ? C8 ANP 401 C 1 
HETATM 24 N N7 ANP . . . H 3 -15.656 26.867 -1.015 1 67.51 ? N7 ANP 401 C 1 
HETATM 25 C C5 ANP . . . H 3 -14.365 27.026 -0.724 1 66.51 ? C5 ANP 401 C 1 
HETATM 26 C C6 ANP . . . H 3 -13.095 26.602 -1.319 1 64.83 ? C6 ANP 401 C 1 
HETATM 27 N N6 ANP . . . H 3 -13.071 25.861 -2.445 1 64.72 ? N6 ANP 401 C 1 
HETATM 28 N N1 ANP . . . H 3 -11.971 26.983 -0.702 1 64.29 ? N1 ANP 401 C 1 
HETATM 29 C C2 ANP . . . H 3 -11.983 27.723 0.414 1 65.27 ? C2 ANP 401 C 1 
HETATM 30 N N3 ANP . . . H 3 -13.106 28.14 1.005 1 66.79 ? N3 ANP 401 C 1 
HETATM 31 C C4 ANP . . . H 3 -14.306 27.826 0.492 1 67.62 ? C4 ANP 401 C 1 
HETATM 32 H HNB1 ANP . . . H 3 -22.417 25.233 3.917 1 111.03 ? HNB1 ANP 401 C 1 
HETATM 33 H "H5'1" ANP . . . H 3 -20.028 29.559 2.77 1 57.56 ? "H5'1" ANP 401 C 1 
HETATM 34 H "H5'2" ANP . . . H 3 -19.714 30.883 1.635 1 57.56 ? "H5'2" ANP 401 C 1 
HETATM 35 H H4' ANP . . . H 3 -17.962 30.284 3.534 1 54.39 ? H4' ANP 401 C 1 
HETATM 36 H H3' ANP . . . H 3 -17.44 31.018 0.653 1 60.43 ? H3' ANP 401 C 1 
HETATM 37 H HO3' ANP . . . H 3 -17.368 32.898 1.669 1 68 ? HO3' ANP 401 C 1 
HETATM 38 H H2' ANP . . . H 3 -15.243 30.502 0.753 1 63.26 ? H2' ANP 401 C 1 
HETATM 39 H HO2' ANP . . . H 3 -14.951 31.892 2.664 1 73.77 ? HO2' ANP 401 C 1 
HETATM 40 H H1' ANP . . . H 3 -15.309 28.607 2.875 1 57.28 ? H1' ANP 401 C 1 
HETATM 41 H H8 ANP . . . H 3 -17.451 27.536 -0.063 1 54.72 ? H8 ANP 401 C 1 
HETATM 42 H HN61 ANP . . . H 3 -13.938 25.593 -2.883 1 43.58 ? HN61 ANP 401 C 1 
HETATM 43 H HN62 ANP . . . H 3 -12.191 25.573 -2.847 1 43.58 ? HN62 ANP 401 C 1 
HETATM 44 H H2 ANP . . . H 3 -11.039 27.995 0.859 1 43.96 ? H2 ANP 401 C 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           44 
#