data_7DRT # _model_server_result.job_id Iofj92dT7-RhvPX4cazXwQ _model_server_result.datetime_utc '2025-03-06 03:31:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7drt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 7DRT # _exptl.entry_id 7DRT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 254.408 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITOLEIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 H 1 NAG H 1 NAG 3 n C NAG 2 H 2 NAG H 2 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 42 A CYS 42 1_555 A SG CYS 56 A CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf2 A SG CYS 77 A CYS 77 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf3 A SG CYS 138 A CYS 138 1_555 A SG CYS 155 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? disulf ? disulf4 A SG CYS 203 A CYS 203 1_555 A SG CYS 217 A CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf5 A SG CYS 205 A CYS 205 1_555 A SG CYS 212 A CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 A SG CYS 281 A CYS 281 1_555 A SG CYS 312 A CYS 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf7 A SG CYS 297 A CYS 297 1_555 A SG CYS 307 A CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? disulf ? disulf8 A SG CYS 311 A CYS 311 1_555 A SG CYS 351 A CYS 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? disulf ? disulf9 A SG CYS 327 A CYS 327 1_555 A SG CYS 342 A CYS 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf10 A SG CYS 329 A CYS 329 1_555 A SG CYS 339 A CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf11 A SG CYS 334 A CYS 334 1_555 A SG CYS 335 A CYS 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? disulf ? disulf12 B SG CYS 50 B CYS 50 1_555 B SG CYS 71 B CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf13 B SG CYS 162 B CYS 162 1_555 B SG CYS 179 B CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? covale ? covale1 C O4 NAG . H NAG 1 1_555 C C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? # _chem_comp.formula 'C16 H30 O2' _chem_comp.formula_weight 254.408 _chem_comp.id PAM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITOLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PAM sing 434 n n C1 O2 PAM doub 435 n n C1 C2 PAM sing 436 n n O1 HO1 PAM sing 437 n n C2 C3 PAM sing 438 n n C2 H21 PAM sing 439 n n C2 H22 PAM sing 440 n n C3 C4 PAM sing 441 n n C3 H31 PAM sing 442 n n C3 H32 PAM sing 443 n n C4 C5 PAM sing 444 n n C4 H41 PAM sing 445 n n C4 H42 PAM sing 446 n n C5 C6 PAM sing 447 n n C5 H51 PAM sing 448 n n C5 H52 PAM sing 449 n n C6 C7 PAM sing 450 n n C6 H61 PAM sing 451 n n C6 H62 PAM sing 452 n n C7 C8 PAM sing 453 n n C7 H71 PAM sing 454 n n C7 H72 PAM sing 455 n n C8 C9 PAM sing 456 n n C8 H81 PAM sing 457 n n C8 H82 PAM sing 458 n n C9 C10 PAM doub 459 z n C9 H9 PAM sing 460 n n C10 C11 PAM sing 461 n n C10 H10 PAM sing 462 n n C11 C12 PAM sing 463 n n C11 H111 PAM sing 464 n n C11 H112 PAM sing 465 n n C12 C13 PAM sing 466 n n C12 H121 PAM sing 467 n n C12 H122 PAM sing 468 n n C13 C14 PAM sing 469 n n C13 H131 PAM sing 470 n n C13 H132 PAM sing 471 n n C14 C15 PAM sing 472 n n C14 H141 PAM sing 473 n n C14 H142 PAM sing 474 n n C15 C16 PAM sing 475 n n C15 H151 PAM sing 476 n n C15 H152 PAM sing 477 n n C16 H161 PAM sing 478 n n C16 H162 PAM sing 479 n n C16 H163 PAM sing 480 n n # _atom_sites.entry_id 7DRT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 PAM A 1 501 501 PAM PAM . E 5 PCW A 1 502 503 PCW PCW . F 6 CLR B 1 601 502 CLR CLR . G 7 LPE B 1 602 504 LPE LPE . H 5 PCW B 1 603 505 PCW PCW . I 8 HOH A 1 601 7 HOH HOH . I 8 HOH A 2 602 9 HOH HOH . I 8 HOH A 3 603 5 HOH HOH . I 8 HOH A 4 604 3 HOH HOH . I 8 HOH A 5 605 11 HOH HOH . J 8 HOH B 1 701 10 HOH HOH . J 8 HOH B 2 702 12 HOH HOH . J 8 HOH B 3 703 2 HOH HOH . J 8 HOH B 4 704 8 HOH HOH . J 8 HOH B 5 705 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PAM . . . D 4 141.223 126.562 130.922 1 20 ? C1 PAM 501 A 1 HETATM 2 O O1 PAM . . . D 4 140.546 125.576 130.57 1 20 ? O1 PAM 501 A 1 HETATM 3 C C2 PAM . . . D 4 142.323 127.047 129.993 1 20 ? C2 PAM 501 A 1 HETATM 4 C C3 PAM . . . D 4 142.371 126.351 128.668 1 20 ? C3 PAM 501 A 1 HETATM 5 C C4 PAM . . . D 4 143.342 125.183 128.655 1 20 ? C4 PAM 501 A 1 HETATM 6 C C5 PAM . . . D 4 144.487 125.34 127.685 1 20 ? C5 PAM 501 A 1 HETATM 7 C C6 PAM . . . D 4 144.161 124.927 126.27 1 20 ? C6 PAM 501 A 1 HETATM 8 C C7 PAM . . . D 4 145.001 125.621 125.206 1 20 ? C7 PAM 501 A 1 HETATM 9 C C8 PAM . . . D 4 145.859 124.695 124.4 1 20 ? C8 PAM 501 A 1 HETATM 10 C C9 PAM . . . D 4 145.224 124.256 123.114 1 20 ? C9 PAM 501 A 1 HETATM 11 C C10 PAM . . . D 4 145.396 123.097 122.529 1 20 ? C10 PAM 501 A 1 HETATM 12 C C11 PAM . . . D 4 145.902 121.846 123.178 1 20 ? C11 PAM 501 A 1 HETATM 13 C C12 PAM . . . D 4 145.787 120.617 122.315 1 20 ? C12 PAM 501 A 1 HETATM 14 C C13 PAM . . . D 4 146.837 119.53 122.546 1 20 ? C13 PAM 501 A 1 HETATM 15 C C14 PAM . . . D 4 148.178 120.004 123.072 1 20 ? C14 PAM 501 A 1 HETATM 16 C C15 PAM . . . D 4 148.187 120.466 124.509 1 20 ? C15 PAM 501 A 1 HETATM 17 C C16 PAM . . . D 4 149.242 121.504 124.802 1 20 ? C16 PAM 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 17 #