data_7DU8 # _model_server_result.job_id AHZRcCgHCZ1_pp9k-O94Zg _model_server_result.datetime_utc '2024-11-26 08:36:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7du8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 7DU8 # _exptl.entry_id 7DU8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 525.602 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Selpercatinib _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.61 _cell.angle_gamma 90 _cell.entry_id 7DU8 _cell.length_a 50.771 _cell.length_b 80.265 _cell.length_c 79.91 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C29 H31 N7 O3' _chem_comp.formula_weight 525.602 _chem_comp.id Q6G _chem_comp.mon_nstd_flag . _chem_comp.name Selpercatinib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 6-(2-hydroxy-2-methylpropoxy)-4-(6-{(1R,5S)-6-[(6-methoxypyridin-3-yl)methyl]-3,6-diazabicyclo[3.1.1]heptan-3-yl}pyridin-3-yl)pyrazolo[1,5-a]pyridine-3-carbonitrile # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBL OBK Q6G sing 277 n n OBK CBH Q6G sing 278 n n NBG CBH Q6G doub 279 n y NBG CBF Q6G sing 280 n y CBH CBI Q6G sing 281 n y CBF CBE Q6G doub 282 n y CBI CBJ Q6G doub 283 n y CBE CBJ Q6G sing 284 n y CBE CBD Q6G sing 285 n n CBD NBA Q6G sing 286 n n NBA CBB Q6G sing 287 n n NBA CAZ Q6G sing 288 n n CBB CBC Q6G sing 289 n n CBB CBA Q6G sing 290 n n CBC NAX Q6G sing 291 n n CBA CAZ Q6G sing 292 n n CAZ CAY Q6G sing 293 n n NAX CAY Q6G sing 294 n n NAX CAU Q6G sing 295 n n CAV CAU Q6G doub 296 n y CAV CAW Q6G sing 297 n y CAU NAT Q6G sing 298 n y CAW CAR Q6G doub 299 n y NAT CAS Q6G doub 300 n y CAR CAS Q6G sing 301 n y CAR CAI Q6G sing 302 n n NAQ CAP Q6G trip 303 n n OAC CAB Q6G sing 304 n n CAI CAH Q6G doub 305 n y CAI CAJ Q6G sing 306 n y CAH CAG Q6G sing 307 n y CAP CAM Q6G sing 308 n n CAJ CAM Q6G doub 309 n y CAJ NAK Q6G sing 310 n y CAM CAN Q6G sing 311 n y CAG OAF Q6G sing 312 n n CAG CAL Q6G doub 313 n y OAF CAD Q6G sing 314 n n CAB CAD Q6G sing 315 n n CAB CAE Q6G sing 316 n n CAB CAA Q6G sing 317 n n NAK CAL Q6G sing 318 n y NAK NAO Q6G sing 319 n y CAN NAO Q6G doub 320 n y CAA H1 Q6G sing 321 n n CAA H2 Q6G sing 322 n n CAA H3 Q6G sing 323 n n CAE H4 Q6G sing 324 n n CAE H5 Q6G sing 325 n n CAE H6 Q6G sing 326 n n OAC H7 Q6G sing 327 n n CAD H8 Q6G sing 328 n n CAD H9 Q6G sing 329 n n CAH H10 Q6G sing 330 n n CAL H11 Q6G sing 331 n n CAN H12 Q6G sing 332 n n CAS H13 Q6G sing 333 n n CAW H14 Q6G sing 334 n n CAV H15 Q6G sing 335 n n CAY H16 Q6G sing 336 n n CAY H17 Q6G sing 337 n n CBC H18 Q6G sing 338 n n CBC H19 Q6G sing 339 n n CBB H20 Q6G sing 340 n n CBA H21 Q6G sing 341 n n CBA H22 Q6G sing 342 n n CAZ H23 Q6G sing 343 n n CBD H25 Q6G sing 344 n n CBD H26 Q6G sing 345 n n CBF H27 Q6G sing 346 n n CBJ H28 Q6G sing 347 n n CBI H29 Q6G sing 348 n n CBL H30 Q6G sing 349 n n CBL H31 Q6G sing 350 n n CBL H32 Q6G sing 351 n n # _atom_sites.entry_id 7DU8 _atom_sites.fract_transf_matrix[1][1] 0.019696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003333 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012692 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Q6G A 1 1101 1 Q6G INX . D 2 Q6G B 1 1101 2 Q6G INX . E 3 HOH A 1 1201 127 HOH HOH . E 3 HOH A 2 1202 4 HOH HOH . E 3 HOH A 3 1203 112 HOH HOH . E 3 HOH A 4 1204 39 HOH HOH . E 3 HOH A 5 1205 73 HOH HOH . E 3 HOH A 6 1206 111 HOH HOH . E 3 HOH A 7 1207 13 HOH HOH . E 3 HOH A 8 1208 8 HOH HOH . E 3 HOH A 9 1209 122 HOH HOH . E 3 HOH A 10 1210 16 HOH HOH . E 3 HOH A 11 1211 44 HOH HOH . E 3 HOH A 12 1212 32 HOH HOH . E 3 HOH A 13 1213 7 HOH HOH . E 3 HOH A 14 1214 14 HOH HOH . E 3 HOH A 15 1215 19 HOH HOH . E 3 HOH A 16 1216 5 HOH HOH . E 3 HOH A 17 1217 48 HOH HOH . E 3 HOH A 18 1218 53 HOH HOH . E 3 HOH A 19 1219 55 HOH HOH . E 3 HOH A 20 1220 56 HOH HOH . E 3 HOH A 21 1221 49 HOH HOH . E 3 HOH A 22 1222 41 HOH HOH . E 3 HOH A 23 1223 47 HOH HOH . E 3 HOH A 24 1224 1 HOH HOH . E 3 HOH A 25 1225 25 HOH HOH . E 3 HOH A 26 1226 120 HOH HOH . E 3 HOH A 27 1227 18 HOH HOH . E 3 HOH A 28 1228 113 HOH HOH . E 3 HOH A 29 1229 110 HOH HOH . E 3 HOH A 30 1230 118 HOH HOH . E 3 HOH A 31 1231 126 HOH HOH . E 3 HOH A 32 1232 31 HOH HOH . E 3 HOH A 33 1233 128 HOH HOH . E 3 HOH A 34 1234 123 HOH HOH . E 3 HOH A 35 1235 124 HOH HOH . E 3 HOH A 36 1236 119 HOH HOH . F 3 HOH B 1 1201 65 HOH HOH . F 3 HOH B 2 1202 88 HOH HOH . F 3 HOH B 3 1203 64 HOH HOH . F 3 HOH B 4 1204 54 HOH HOH . F 3 HOH B 5 1205 67 HOH HOH . F 3 HOH B 6 1206 61 HOH HOH . F 3 HOH B 7 1207 6 HOH HOH . F 3 HOH B 8 1208 27 HOH HOH . F 3 HOH B 9 1209 2 HOH HOH . F 3 HOH B 10 1210 10 HOH HOH . F 3 HOH B 11 1211 58 HOH HOH . F 3 HOH B 12 1212 71 HOH HOH . F 3 HOH B 13 1213 57 HOH HOH . F 3 HOH B 14 1214 24 HOH HOH . F 3 HOH B 15 1215 42 HOH HOH . F 3 HOH B 16 1216 33 HOH HOH . F 3 HOH B 17 1217 117 HOH HOH . F 3 HOH B 18 1218 63 HOH HOH . F 3 HOH B 19 1219 115 HOH HOH . F 3 HOH B 20 1220 114 HOH HOH . F 3 HOH B 21 1221 38 HOH HOH . F 3 HOH B 22 1222 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Q6G . . . C 2 2.711 8.611 -3.375 1 39.22 ? CAA Q6G 1101 A 1 HETATM 2 C CAB Q6G . . . C 2 2.376 8.223 -1.929 1 37.87 ? CAB Q6G 1101 A 1 HETATM 3 C CAE Q6G . . . C 2 3.267 9.031 -0.981 1 35.89 ? CAE Q6G 1101 A 1 HETATM 4 O OAC Q6G . . . C 2 1.013 8.563 -1.678 1 40.74 ? OAC Q6G 1101 A 1 HETATM 5 C CAD Q6G . . . C 2 2.546 6.718 -1.681 1 37.37 ? CAD Q6G 1101 A 1 HETATM 6 O OAF Q6G . . . C 2 3.891 6.322 -1.97 1 37.75 ? OAF Q6G 1101 A 1 HETATM 7 C CAG Q6G . . . C 2 4.317 5.026 -2.052 1 34.97 ? CAG Q6G 1101 A 1 HETATM 8 C CAH Q6G . . . C 2 5.496 4.813 -2.779 1 34.57 ? CAH Q6G 1101 A 1 HETATM 9 C CAL Q6G . . . C 2 3.719 3.946 -1.457 1 35.46 ? CAL Q6G 1101 A 1 HETATM 10 N NAK Q6G . . . C 2 4.251 2.683 -1.598 1 35.29 ? NAK Q6G 1101 A 1 HETATM 11 N NAO Q6G . . . C 2 3.807 1.455 -1.102 1 34.49 ? NAO Q6G 1101 A 1 HETATM 12 C CAN Q6G . . . C 2 4.623 0.512 -1.48 1 34.88 ? CAN Q6G 1101 A 1 HETATM 13 C CAM Q6G . . . C 2 5.649 1.052 -2.251 1 35.45 ? CAM Q6G 1101 A 1 HETATM 14 C CAP Q6G . . . C 2 6.696 0.254 -2.813 1 37.01 ? CAP Q6G 1101 A 1 HETATM 15 N NAQ Q6G . . . C 2 7.556 -0.327 -3.288 1 39.38 ? NAQ Q6G 1101 A 1 HETATM 16 C CAJ Q6G . . . C 2 5.401 2.438 -2.316 1 36.04 ? CAJ Q6G 1101 A 1 HETATM 17 C CAI Q6G . . . C 2 6.046 3.543 -2.92 1 35.86 ? CAI Q6G 1101 A 1 HETATM 18 C CAR Q6G . . . C 2 7.266 3.416 -3.722 1 36.57 ? CAR Q6G 1101 A 1 HETATM 19 C CAS Q6G . . . C 2 8.512 3.013 -3.215 1 38.59 ? CAS Q6G 1101 A 1 HETATM 20 N NAT Q6G . . . C 2 9.561 2.932 -4.021 1 39.18 ? NAT Q6G 1101 A 1 HETATM 21 C CAW Q6G . . . C 2 7.154 3.74 -5.08 1 37.32 ? CAW Q6G 1101 A 1 HETATM 22 C CAV Q6G . . . C 2 8.274 3.647 -5.877 1 37.79 ? CAV Q6G 1101 A 1 HETATM 23 C CAU Q6G . . . C 2 9.503 3.23 -5.329 1 40.57 ? CAU Q6G 1101 A 1 HETATM 24 N NAX Q6G . . . C 2 10.648 3.12 -6.125 1 43.98 ? NAX Q6G 1101 A 1 HETATM 25 C CAY Q6G . . . C 2 11.845 2.46 -5.531 1 45.84 ? CAY Q6G 1101 A 1 HETATM 26 C CBC Q6G . . . C 2 10.896 4.047 -7.274 1 44.74 ? CBC Q6G 1101 A 1 HETATM 27 C CBB Q6G . . . C 2 12.177 3.642 -8.044 1 44.88 ? CBB Q6G 1101 A 1 HETATM 28 C CBA Q6G . . . C 2 13.384 3.769 -7.084 1 45.83 ? CBA Q6G 1101 A 1 HETATM 29 C CAZ Q6G . . . C 2 12.984 2.359 -6.575 1 46.89 ? CAZ Q6G 1101 A 1 HETATM 30 N NBA Q6G . . . C 2 12.501 2.182 -8.009 1 47.67 ? NBA Q6G 1101 A 1 HETATM 31 C CBD Q6G . . . C 2 11.434 1.195 -8.348 1 48.78 ? CBD Q6G 1101 A 1 HETATM 32 C CBE Q6G . . . C 2 11.992 -0.152 -8.737 1 48.54 ? CBE Q6G 1101 A 1 HETATM 33 C CBF Q6G . . . C 2 11.215 -0.994 -9.528 1 49.43 ? CBF Q6G 1101 A 1 HETATM 34 N NBG Q6G . . . C 2 11.659 -2.198 -9.898 1 51.68 ? NBG Q6G 1101 A 1 HETATM 35 C CBJ Q6G . . . C 2 13.244 -0.621 -8.312 1 49.2 ? CBJ Q6G 1101 A 1 HETATM 36 C CBI Q6G . . . C 2 13.689 -1.863 -8.723 1 50.25 ? CBI Q6G 1101 A 1 HETATM 37 C CBH Q6G . . . C 2 12.857 -2.666 -9.531 1 52.21 ? CBH Q6G 1101 A 1 HETATM 38 O OBK Q6G . . . C 2 13.214 -3.909 -9.968 1 49.74 ? OBK Q6G 1101 A 1 HETATM 39 C CBL Q6G . . . C 2 14.475 -4.493 -9.627 1 49.07 ? CBL Q6G 1101 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 39 #