data_7DV0 # _model_server_result.job_id FbOqXhTLJ_um0zC5yueJbQ _model_server_result.datetime_utc '2024-12-03 21:18:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dv0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7DV0 # _exptl.entry_id 7DV0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.207 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-[[4-(trifluoromethyl)phenyl]methyl]imidazole-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DV0 _cell.length_a 46.148 _cell.length_b 64.535 _cell.length_c 90.995 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DV0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 83 A HIS 114 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc2 A ND1 HIS 85 A HIS 116 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc3 A OD2 ASP 87 A ASP 118 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc4 A NE2 HIS 148 A HIS 179 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc5 A SG CYS 167 A CYS 198 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc6 A NE2 HIS 209 A HIS 240 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc7 B ZN ZN . A ZN 301 1_555 G O HOH . A HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc8 C ZN ZN . A ZN 302 1_555 D O08 HML . A HML 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc9 C ZN ZN . A ZN 302 1_555 D N05 HML . A HML 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc10 C ZN ZN . A ZN 302 1_555 G O HOH . A HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? # _chem_comp.formula 'C12 H9 F3 N2 O2' _chem_comp.formula_weight 270.207 _chem_comp.id HML _chem_comp.mon_nstd_flag . _chem_comp.name '1-[[4-(trifluoromethyl)phenyl]methyl]imidazole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F19 C16 HML sing 163 n n C16 F18 HML sing 164 n n C16 F17 HML sing 165 n n C16 C13 HML sing 166 n n C12 C13 HML doub 167 n y C12 C11 HML sing 168 n y C13 C14 HML sing 169 n y C11 C10 HML doub 170 n y C14 C15 HML doub 171 n y C10 C15 HML sing 172 n y C10 C09 HML sing 173 n n C09 N03 HML sing 174 n n N03 C02 HML sing 175 n y N03 C04 HML sing 176 n y C02 C01 HML doub 177 n y O07 C06 HML doub 178 n n C04 C06 HML sing 179 n n C04 N05 HML doub 180 n y C06 O08 HML sing 181 n n C01 N05 HML sing 182 n y C11 H1 HML sing 183 n n C12 H2 HML sing 184 n n C14 H3 HML sing 185 n n C15 H4 HML sing 186 n n C01 H5 HML sing 187 n n C02 H6 HML sing 188 n n O08 H7 HML sing 189 n n C09 H8 HML sing 190 n n C09 H9 HML sing 191 n n # _atom_sites.entry_id 7DV0 _atom_sites.fract_transf_matrix[1][1] 0.021669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015495 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01099 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 2 ZN A 1 302 302 ZN ZN . D 3 HML A 1 303 401 HML L77 . E 4 GOL A 1 304 501 GOL GOL . F 4 GOL A 1 305 502 GOL GOL . G 5 HOH A 1 401 157 HOH HOH . G 5 HOH A 2 402 147 HOH HOH . G 5 HOH A 3 403 202 HOH HOH . G 5 HOH A 4 404 98 HOH HOH . G 5 HOH A 5 405 223 HOH HOH . G 5 HOH A 6 406 69 HOH HOH . G 5 HOH A 7 407 177 HOH HOH . G 5 HOH A 8 408 39 HOH HOH . G 5 HOH A 9 409 110 HOH HOH . G 5 HOH A 10 410 41 HOH HOH . G 5 HOH A 11 411 15 HOH HOH . G 5 HOH A 12 412 22 HOH HOH . G 5 HOH A 13 413 138 HOH HOH . G 5 HOH A 14 414 160 HOH HOH . G 5 HOH A 15 415 28 HOH HOH . G 5 HOH A 16 416 10 HOH HOH . G 5 HOH A 17 417 97 HOH HOH . G 5 HOH A 18 418 101 HOH HOH . G 5 HOH A 19 419 20 HOH HOH . G 5 HOH A 20 420 73 HOH HOH . G 5 HOH A 21 421 78 HOH HOH . G 5 HOH A 22 422 170 HOH HOH . G 5 HOH A 23 423 43 HOH HOH . G 5 HOH A 24 424 1 HOH HOH . G 5 HOH A 25 425 108 HOH HOH . G 5 HOH A 26 426 76 HOH HOH . G 5 HOH A 27 427 13 HOH HOH . G 5 HOH A 28 428 36 HOH HOH . G 5 HOH A 29 429 61 HOH HOH . G 5 HOH A 30 430 66 HOH HOH . G 5 HOH A 31 431 24 HOH HOH . G 5 HOH A 32 432 96 HOH HOH . G 5 HOH A 33 433 30 HOH HOH . G 5 HOH A 34 434 31 HOH HOH . G 5 HOH A 35 435 67 HOH HOH . G 5 HOH A 36 436 2 HOH HOH . G 5 HOH A 37 437 75 HOH HOH . G 5 HOH A 38 438 44 HOH HOH . G 5 HOH A 39 439 3 HOH HOH . G 5 HOH A 40 440 144 HOH HOH . G 5 HOH A 41 441 117 HOH HOH . G 5 HOH A 42 442 74 HOH HOH . G 5 HOH A 43 443 49 HOH HOH . G 5 HOH A 44 444 37 HOH HOH . G 5 HOH A 45 445 203 HOH HOH . G 5 HOH A 46 446 139 HOH HOH . G 5 HOH A 47 447 87 HOH HOH . G 5 HOH A 48 448 59 HOH HOH . G 5 HOH A 49 449 88 HOH HOH . G 5 HOH A 50 450 27 HOH HOH . G 5 HOH A 51 451 94 HOH HOH . G 5 HOH A 52 452 178 HOH HOH . G 5 HOH A 53 453 122 HOH HOH . G 5 HOH A 54 454 65 HOH HOH . G 5 HOH A 55 455 77 HOH HOH . G 5 HOH A 56 456 8 HOH HOH . G 5 HOH A 57 457 40 HOH HOH . G 5 HOH A 58 458 92 HOH HOH . G 5 HOH A 59 459 129 HOH HOH . G 5 HOH A 60 460 126 HOH HOH . G 5 HOH A 61 461 14 HOH HOH . G 5 HOH A 62 462 145 HOH HOH . G 5 HOH A 63 463 29 HOH HOH . G 5 HOH A 64 464 17 HOH HOH . G 5 HOH A 65 465 133 HOH HOH . G 5 HOH A 66 466 190 HOH HOH . G 5 HOH A 67 467 19 HOH HOH . G 5 HOH A 68 468 115 HOH HOH . G 5 HOH A 69 469 89 HOH HOH . G 5 HOH A 70 470 53 HOH HOH . G 5 HOH A 71 471 192 HOH HOH . G 5 HOH A 72 472 12 HOH HOH . G 5 HOH A 73 473 109 HOH HOH . G 5 HOH A 74 474 4 HOH HOH . G 5 HOH A 75 475 33 HOH HOH . G 5 HOH A 76 476 188 HOH HOH . G 5 HOH A 77 477 72 HOH HOH . G 5 HOH A 78 478 116 HOH HOH . G 5 HOH A 79 479 38 HOH HOH . G 5 HOH A 80 480 166 HOH HOH . G 5 HOH A 81 481 25 HOH HOH . G 5 HOH A 82 482 143 HOH HOH . G 5 HOH A 83 483 51 HOH HOH . G 5 HOH A 84 484 18 HOH HOH . G 5 HOH A 85 485 85 HOH HOH . G 5 HOH A 86 486 214 HOH HOH . G 5 HOH A 87 487 6 HOH HOH . G 5 HOH A 88 488 47 HOH HOH . G 5 HOH A 89 489 127 HOH HOH . G 5 HOH A 90 490 48 HOH HOH . G 5 HOH A 91 491 11 HOH HOH . G 5 HOH A 92 492 58 HOH HOH . G 5 HOH A 93 493 55 HOH HOH . G 5 HOH A 94 494 16 HOH HOH . G 5 HOH A 95 495 100 HOH HOH . G 5 HOH A 96 496 172 HOH HOH . G 5 HOH A 97 497 149 HOH HOH . G 5 HOH A 98 498 84 HOH HOH . G 5 HOH A 99 499 239 HOH HOH . G 5 HOH A 100 500 42 HOH HOH . G 5 HOH A 101 501 52 HOH HOH . G 5 HOH A 102 502 104 HOH HOH . G 5 HOH A 103 503 70 HOH HOH . G 5 HOH A 104 504 103 HOH HOH . G 5 HOH A 105 505 83 HOH HOH . G 5 HOH A 106 506 7 HOH HOH . G 5 HOH A 107 507 146 HOH HOH . G 5 HOH A 108 508 136 HOH HOH . G 5 HOH A 109 509 93 HOH HOH . G 5 HOH A 110 510 209 HOH HOH . G 5 HOH A 111 511 141 HOH HOH . G 5 HOH A 112 512 82 HOH HOH . G 5 HOH A 113 513 220 HOH HOH . G 5 HOH A 114 514 9 HOH HOH . G 5 HOH A 115 515 132 HOH HOH . G 5 HOH A 116 516 159 HOH HOH . G 5 HOH A 117 517 79 HOH HOH . G 5 HOH A 118 518 152 HOH HOH . G 5 HOH A 119 519 54 HOH HOH . G 5 HOH A 120 520 81 HOH HOH . G 5 HOH A 121 521 222 HOH HOH . G 5 HOH A 122 522 218 HOH HOH . G 5 HOH A 123 523 26 HOH HOH . G 5 HOH A 124 524 114 HOH HOH . G 5 HOH A 125 525 80 HOH HOH . G 5 HOH A 126 526 107 HOH HOH . G 5 HOH A 127 527 111 HOH HOH . G 5 HOH A 128 528 201 HOH HOH . G 5 HOH A 129 529 140 HOH HOH . G 5 HOH A 130 530 71 HOH HOH . G 5 HOH A 131 531 5 HOH HOH . G 5 HOH A 132 532 175 HOH HOH . G 5 HOH A 133 533 21 HOH HOH . G 5 HOH A 134 534 153 HOH HOH . G 5 HOH A 135 535 23 HOH HOH . G 5 HOH A 136 536 182 HOH HOH . G 5 HOH A 137 537 56 HOH HOH . G 5 HOH A 138 538 171 HOH HOH . G 5 HOH A 139 539 121 HOH HOH . G 5 HOH A 140 540 118 HOH HOH . G 5 HOH A 141 541 245 HOH HOH . G 5 HOH A 142 542 161 HOH HOH . G 5 HOH A 143 543 60 HOH HOH . G 5 HOH A 144 544 167 HOH HOH . G 5 HOH A 145 545 191 HOH HOH . G 5 HOH A 146 546 142 HOH HOH . G 5 HOH A 147 547 62 HOH HOH . G 5 HOH A 148 548 91 HOH HOH . G 5 HOH A 149 549 137 HOH HOH . G 5 HOH A 150 550 208 HOH HOH . G 5 HOH A 151 551 213 HOH HOH . G 5 HOH A 152 552 46 HOH HOH . G 5 HOH A 153 553 68 HOH HOH . G 5 HOH A 154 554 95 HOH HOH . G 5 HOH A 155 555 112 HOH HOH . G 5 HOH A 156 556 241 HOH HOH . G 5 HOH A 157 557 102 HOH HOH . G 5 HOH A 158 558 165 HOH HOH . G 5 HOH A 159 559 119 HOH HOH . G 5 HOH A 160 560 155 HOH HOH . G 5 HOH A 161 561 233 HOH HOH . G 5 HOH A 162 562 120 HOH HOH . G 5 HOH A 163 563 158 HOH HOH . G 5 HOH A 164 564 181 HOH HOH . G 5 HOH A 165 565 193 HOH HOH . G 5 HOH A 166 566 246 HOH HOH . G 5 HOH A 167 567 230 HOH HOH . G 5 HOH A 168 568 179 HOH HOH . G 5 HOH A 169 569 194 HOH HOH . G 5 HOH A 170 570 125 HOH HOH . G 5 HOH A 171 571 168 HOH HOH . G 5 HOH A 172 572 106 HOH HOH . G 5 HOH A 173 573 135 HOH HOH . G 5 HOH A 174 574 195 HOH HOH . G 5 HOH A 175 575 183 HOH HOH . G 5 HOH A 176 576 63 HOH HOH . G 5 HOH A 177 577 124 HOH HOH . G 5 HOH A 178 578 247 HOH HOH . G 5 HOH A 179 579 229 HOH HOH . G 5 HOH A 180 580 156 HOH HOH . G 5 HOH A 181 581 212 HOH HOH . G 5 HOH A 182 582 207 HOH HOH . G 5 HOH A 183 583 185 HOH HOH . G 5 HOH A 184 584 227 HOH HOH . G 5 HOH A 185 585 234 HOH HOH . G 5 HOH A 186 586 198 HOH HOH . G 5 HOH A 187 587 90 HOH HOH . G 5 HOH A 188 588 86 HOH HOH . G 5 HOH A 189 589 196 HOH HOH . G 5 HOH A 190 590 197 HOH HOH . G 5 HOH A 191 591 187 HOH HOH . G 5 HOH A 192 592 225 HOH HOH . G 5 HOH A 193 593 224 HOH HOH . G 5 HOH A 194 594 235 HOH HOH . G 5 HOH A 195 595 163 HOH HOH . G 5 HOH A 196 596 169 HOH HOH . G 5 HOH A 197 597 154 HOH HOH . G 5 HOH A 198 598 205 HOH HOH . G 5 HOH A 199 599 189 HOH HOH . G 5 HOH A 200 600 134 HOH HOH . G 5 HOH A 201 601 176 HOH HOH . G 5 HOH A 202 602 221 HOH HOH . G 5 HOH A 203 603 131 HOH HOH . G 5 HOH A 204 604 174 HOH HOH . G 5 HOH A 205 605 210 HOH HOH . G 5 HOH A 206 606 32 HOH HOH . G 5 HOH A 207 607 123 HOH HOH . G 5 HOH A 208 608 105 HOH HOH . G 5 HOH A 209 609 64 HOH HOH . G 5 HOH A 210 610 232 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 HML . . . D 3 19.827 11.826 6.053 1 16.32 ? C10 HML 303 A 1 HETATM 2 C C11 HML . . . D 3 19.355 11.115 4.955 1 18.27 ? C11 HML 303 A 1 HETATM 3 C C12 HML . . . D 3 18.332 11.639 4.164 1 15.51 ? C12 HML 303 A 1 HETATM 4 C C13 HML . . . D 3 17.759 12.87 4.458 1 17.99 ? C13 HML 303 A 1 HETATM 5 C C14 HML . . . D 3 18.237 13.58 5.552 1 15.98 ? C14 HML 303 A 1 HETATM 6 C C15 HML . . . D 3 19.255 13.062 6.342 1 14.97 ? C15 HML 303 A 1 HETATM 7 C C16 HML . . . D 3 16.635 13.44 3.581 1 22.13 ? C16 HML 303 A 1 HETATM 8 C C01 HML . . . D 3 21.653 13.436 9.717 1 17.85 ? C01 HML 303 A 1 HETATM 9 C C02 HML . . . D 3 21.894 12.974 8.429 1 17.35 ? C02 HML 303 A 1 HETATM 10 N N03 HML . . . D 3 21.038 11.998 8.184 1 18.24 ? N03 HML 303 A 1 HETATM 11 C C04 HML . . . D 3 20.28 11.849 9.264 1 16.73 ? C04 HML 303 A 1 HETATM 12 N N05 HML . . . D 3 20.655 12.716 10.194 1 17.84 ? N05 HML 303 A 1 HETATM 13 C C06 HML . . . D 3 19.148 10.855 9.47 1 17.46 ? C06 HML 303 A 1 HETATM 14 O O07 HML . . . D 3 18.947 9.909 8.651 1 18.8 ? O07 HML 303 A 1 HETATM 15 O O08 HML . . . D 3 18.419 10.999 10.488 1 12.82 -1 O08 HML 303 A 1 HETATM 16 C C09 HML . . . D 3 20.951 11.254 6.931 1 18.76 ? C09 HML 303 A 1 HETATM 17 F F17 HML . . . D 3 15.455 12.813 3.867 1 25.32 ? F17 HML 303 A 1 HETATM 18 F F18 HML . . . D 3 16.46 14.772 3.797 1 23.93 ? F18 HML 303 A 1 HETATM 19 F F19 HML . . . D 3 16.938 13.263 2.263 1 28.9 ? F19 HML 303 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 19 #