data_7DXA
#
_model_server_result.job_id            e8c3ha_gsNBOQW9OxEmfUw 
_model_server_result.datetime_utc      '2024-11-21 13:40:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7dxa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"VA","auth_seq_id":402}' 
#
_entry.id    7DXA 
#
_exptl.entry_id    7DXA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          22 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7DXA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7DXA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetradecameric 
_pdbx_struct_assembly.oligomeric_count      14 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 22 TA N N 
? 22 VA N N 
? 22 KB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C NE2 HIS 215 a HIS 215 1_555 WA FE FE2 . d FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc2 E NE2 HIS 204 d HIS 214 1_555 WA FE FE2 . d FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.805 ? 
metalc ? metalc3 E OE1 GLU 231 d GLU 241 1_555 WA FE FE2 . d FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.758 ? 
metalc ? metalc4 E NE2 HIS 258 d HIS 268 1_555 WA FE FE2 . d FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 724 n n 
C1B O1B LMT sing 725 n n 
C1B O5B LMT sing 726 n n 
C1B H1B LMT sing 727 n n 
C2B C3B LMT sing 728 n n 
C2B O2B LMT sing 729 n n 
C2B H2B LMT sing 730 n n 
C3B C4B LMT sing 731 n n 
C3B O3B LMT sing 732 n n 
C3B H3B LMT sing 733 n n 
C4B C5B LMT sing 734 n n 
C4B O4' LMT sing 735 n n 
C4B H4B LMT sing 736 n n 
C5B C6B LMT sing 737 n n 
C5B O5B LMT sing 738 n n 
C5B H5B LMT sing 739 n n 
C6B O6B LMT sing 740 n n 
C6B "H6'2" LMT sing 741 n n 
C6B "H6'1" LMT sing 742 n n 
O1B C4' LMT sing 743 n n 
O2B H2O1 LMT sing 744 n n 
O3B H3O1 LMT sing 745 n n 
O4' H4O1 LMT sing 746 n n 
O6B H6B LMT sing 747 n n 
C1' C2' LMT sing 748 n n 
C1' O1' LMT sing 749 n n 
C1' O5' LMT sing 750 n n 
C1' H1' LMT sing 751 n n 
C2' C3' LMT sing 752 n n 
C2' O2' LMT sing 753 n n 
C2' H2' LMT sing 754 n n 
C3' C4' LMT sing 755 n n 
C3' O3' LMT sing 756 n n 
C3' H3' LMT sing 757 n n 
C4' C5' LMT sing 758 n n 
C4' H4' LMT sing 759 n n 
C5' C6' LMT sing 760 n n 
C5' O5' LMT sing 761 n n 
C5' H5' LMT sing 762 n n 
C6' O6' LMT sing 763 n n 
C6' H6D LMT sing 764 n n 
C6' H6E LMT sing 765 n n 
O1' C1 LMT sing 766 n n 
O2' H2O2 LMT sing 767 n n 
O3' H3O2 LMT sing 768 n n 
O6' H6' LMT sing 769 n n 
C1 C2 LMT sing 770 n n 
C1 H12 LMT sing 771 n n 
C1 H11 LMT sing 772 n n 
C2 C3 LMT sing 773 n n 
C2 H22 LMT sing 774 n n 
C2 H21 LMT sing 775 n n 
C3 C4 LMT sing 776 n n 
C3 H32 LMT sing 777 n n 
C3 H31 LMT sing 778 n n 
C4 C5 LMT sing 779 n n 
C4 H42 LMT sing 780 n n 
C4 H41 LMT sing 781 n n 
C5 C6 LMT sing 782 n n 
C5 H52 LMT sing 783 n n 
C5 H51 LMT sing 784 n n 
C6 C7 LMT sing 785 n n 
C6 H62 LMT sing 786 n n 
C6 H61 LMT sing 787 n n 
C7 C8 LMT sing 788 n n 
C7 H72 LMT sing 789 n n 
C7 H71 LMT sing 790 n n 
C8 C9 LMT sing 791 n n 
C8 H82 LMT sing 792 n n 
C8 H81 LMT sing 793 n n 
C9 C10 LMT sing 794 n n 
C9 H92 LMT sing 795 n n 
C9 H91 LMT sing 796 n n 
C10 C11 LMT sing 797 n n 
C10 H102 LMT sing 798 n n 
C10 H101 LMT sing 799 n n 
C11 C12 LMT sing 800 n n 
C11 H112 LMT sing 801 n n 
C11 H111 LMT sing 802 n n 
C12 H123 LMT sing 803 n n 
C12 H122 LMT sing 804 n n 
C12 H121 LMT sing 805 n n 
#
_atom_sites.entry_id                     7DXA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
O 15 SQD a 1 401 401 SQD SQD . 
P 16 CLA a 1 402 402 CLA CLA . 
Q 16 CLA a 1 403 403 CLA CLA . 
R 17 PHO a 1 404 404 PHO PHO . 
S 17 PHO a 1 405 405 PHO PHO . 
T 16 CLA a 1 406 406 CLA CLA . 
U 18 BCR a 1 407 407 BCR BCR . 
V 19 CL a 1 408 408 CL CL . 
W 20 MGE a 1 409 409 MGE MGE . 
X 16 CLA b 1 601 601 CLA CLA . 
Y 16 CLA b 1 602 602 CLA CLA . 
Z 16 CLA b 1 603 603 CLA CLA . 
AA 16 CLA b 1 604 604 CLA CLA . 
BA 16 CLA b 1 605 605 CLA CLA . 
CA 16 CLA b 1 606 606 CLA CLA . 
DA 16 CLA b 1 607 607 CLA CLA . 
EA 16 CLA b 1 608 608 CLA CLA . 
FA 16 CLA b 1 609 609 CLA CLA . 
GA 16 CLA b 1 610 610 CLA CLA . 
HA 16 CLA b 1 611 611 CLA CLA . 
IA 16 CLA b 1 612 612 CLA CLA . 
JA 16 CLA b 1 613 613 CLA CLA . 
KA 16 CLA b 1 614 614 CLA CLA . 
LA 16 CLA b 1 615 615 CLA CLA . 
MA 16 CLA b 1 616 616 CLA CLA . 
NA 18 BCR b 1 617 617 BCR BCR . 
OA 18 BCR b 1 618 618 BCR BCR . 
PA 18 BCR b 1 619 619 BCR BCR . 
QA 20 MGE b 1 620 620 MGE MGE . 
RA 21 UNL b 1 621 621 UNL UNL . 
SA 20 MGE b 1 622 622 MGE MGE . 
TA 22 LMT b 1 623 623 LMT LMT . 
UA 16 CLA d 1 401 401 CLA CLA . 
VA 22 LMT d 1 402 402 LMT LMT . 
WA 23 FE2 d 1 403 403 FE2 FE2 . 
XA 16 CLA d 1 404 404 CLA CLA . 
YA 16 CLA d 1 405 405 CLA CLA . 
ZA 24 PQ9 d 1 406 406 PQ9 PQ9 . 
AB 18 BCR d 1 407 407 BCR BCR . 
BB 20 MGE d 1 408 408 MGE MGE . 
CB 20 MGE d 1 409 409 MGE MGE . 
DB 20 MGE d 1 410 410 MGE MGE . 
EB 25 HTG d 1 411 411 HTG HTG . 
FB 26 DGD d 1 412 412 DGD DGD . 
GB 27 HEM e 1 101 101 HEM HEM . 
HB 18 BCR h 1 101 101 BCR BCR . 
IB 15 SQD l 1 101 101 SQD SQD . 
JB 20 MGE m 1 101 101 MGE MGE . 
KB 22 LMT t 1 101 101 LMT LMT . 
LB 21 UNL x 1 101 101 UNL UNL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . VA 22 114.292 166.748 160.753 1 60.84 ? C1B LMT 402 d 1 
HETATM 2 C C2B LMT . . . VA 22 114.056 165.572 159.81 1 60.84 ? C2B LMT 402 d 1 
HETATM 3 C C3B LMT . . . VA 22 114.143 166.101 158.38 1 60.84 ? C3B LMT 402 d 1 
HETATM 4 C C4B LMT . . . VA 22 113.108 167.195 158.121 1 60.84 ? C4B LMT 402 d 1 
HETATM 5 C C5B LMT . . . VA 22 113.344 168.325 159.131 1 60.84 ? C5B LMT 402 d 1 
HETATM 6 C C6B LMT . . . VA 22 112.303 169.431 159.011 1 60.84 ? C6B LMT 402 d 1 
HETATM 7 O O1B LMT . . . VA 22 115.617 167.232 160.537 1 60.84 ? O1B LMT 402 d 1 
HETATM 8 O O2B LMT . . . VA 22 115.04 164.555 160.008 1 60.84 ? O2B LMT 402 d 1 
HETATM 9 O O3B LMT . . . VA 22 113.967 165.039 157.44 1 60.84 ? O3B LMT 402 d 1 
HETATM 10 O O4' LMT . . . VA 22 113.23 167.652 156.771 1 60.84 ? O4' LMT 402 d 1 
HETATM 11 O O5B LMT . . . VA 22 113.34 167.788 160.47 1 60.84 ? O5B LMT 402 d 1 
HETATM 12 O O6B LMT . . . VA 22 112.895 170.676 159.397 1 60.84 ? O6B LMT 402 d 1 
HETATM 13 C C1' LMT . . . VA 22 119.199 167.616 162.563 1 60.84 ? C1' LMT 402 d 1 
HETATM 14 C C2' LMT . . . VA 22 118.528 166.266 162.755 1 60.84 ? C2' LMT 402 d 1 
HETATM 15 C C3' LMT . . . VA 22 117.444 166.137 161.69 1 60.84 ? C3' LMT 402 d 1 
HETATM 16 C C4' LMT . . . VA 22 116.415 167.277 161.718 1 60.84 ? C4' LMT 402 d 1 
HETATM 17 C C5' LMT . . . VA 22 117.123 168.638 161.773 1 60.84 ? C5' LMT 402 d 1 
HETATM 18 C C6' LMT . . . VA 22 116.141 169.755 162.106 1 60.84 ? C6' LMT 402 d 1 
HETATM 19 O O1' LMT . . . VA 22 120.25 167.779 163.506 1 60.84 ? O1' LMT 402 d 1 
HETATM 20 O O2' LMT . . . VA 22 119.473 165.203 162.622 1 60.84 ? O2' LMT 402 d 1 
HETATM 21 O O3' LMT . . . VA 22 116.806 164.862 161.849 1 60.84 ? O3' LMT 402 d 1 
HETATM 22 O O5' LMT . . . VA 22 118.201 168.634 162.731 1 60.84 ? O5' LMT 402 d 1 
HETATM 23 O O6' LMT . . . VA 22 116.802 171.02 162.01 1 60.84 ? O6' LMT 402 d 1 
HETATM 24 C C1 LMT . . . VA 22 121.243 168.662 162.997 1 60.84 ? C1 LMT 402 d 1 
HETATM 25 C C2 LMT . . . VA 22 122.248 168.99 164.091 1 60.84 ? C2 LMT 402 d 1 
HETATM 26 C C3 LMT . . . VA 22 123.521 169.551 163.474 1 60.84 ? C3 LMT 402 d 1 
HETATM 27 C C4 LMT . . . VA 22 124.405 170.165 164.544 1 60.84 ? C4 LMT 402 d 1 
HETATM 28 C C5 LMT . . . VA 22 125.832 170.321 164.037 1 60.84 ? C5 LMT 402 d 1 
HETATM 29 C C6 LMT . . . VA 22 126.695 170.99 165.101 1 60.84 ? C6 LMT 402 d 1 
HETATM 30 C C7 LMT . . . VA 22 126.2 172.4 165.411 1 60.84 ? C7 LMT 402 d 1 
HETATM 31 C C8 LMT . . . VA 22 126.428 172.754 166.874 1 60.84 ? C8 LMT 402 d 1 
HETATM 32 C C9 LMT . . . VA 22 126.625 174.256 167.044 1 60.84 ? C9 LMT 402 d 1 
HETATM 33 C C10 LMT . . . VA 22 127.968 174.694 166.475 1 60.84 ? C10 LMT 402 d 1 
HETATM 34 C C11 LMT . . . VA 22 128.118 176.21 166.511 1 60.84 ? C11 LMT 402 d 1 
HETATM 35 C C12 LMT . . . VA 22 129.45 176.628 165.93 1 60.84 ? C12 LMT 402 d 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           260 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           35 
#