data_7DXA # _model_server_result.job_id T0qof-wRifmYgmLC1S9CcA _model_server_result.datetime_utc '2024-11-23 09:49:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dxa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"NA","auth_seq_id":617}' # _entry.id 7DXA # _exptl.entry_id 7DXA _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 536.873 _entity.id 18 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-CAROTENE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DXA _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DXA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetradecameric _pdbx_struct_assembly.oligomeric_count 14 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 18 U N N ? 18 NA N N ? 18 OA N N ? 18 PA N N ? 18 AB N N ? 18 HB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C NE2 HIS 215 a HIS 215 1_555 WA FE FE2 . d FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc2 E NE2 HIS 204 d HIS 214 1_555 WA FE FE2 . d FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.805 ? metalc ? metalc3 E OE1 GLU 231 d GLU 241 1_555 WA FE FE2 . d FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.758 ? metalc ? metalc4 E NE2 HIS 258 d HIS 268 1_555 WA FE FE2 . d FE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? # _chem_comp.formula 'C40 H56' _chem_comp.formula_weight 536.873 _chem_comp.id BCR _chem_comp.mon_nstd_flag . _chem_comp.name BETA-CAROTENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BCR sing 70 n n C1 C6 BCR sing 71 n n C1 C31 BCR sing 72 n n C1 C32 BCR sing 73 n n C2 C3 BCR sing 74 n n C2 HC21 BCR sing 75 n n C2 HC22 BCR sing 76 n n C3 C4 BCR sing 77 n n C3 HC31 BCR sing 78 n n C3 HC32 BCR sing 79 n n C4 C5 BCR sing 80 n n C4 HC41 BCR sing 81 n n C4 HC42 BCR sing 82 n n C5 C6 BCR doub 83 n n C5 C33 BCR sing 84 n n C6 C7 BCR sing 85 n n C7 C8 BCR doub 86 e n C7 HC7 BCR sing 87 n n C8 C9 BCR sing 88 n n C8 HC8 BCR sing 89 n n C9 C10 BCR doub 90 e n C9 C34 BCR sing 91 n n C10 C11 BCR sing 92 n n C10 H10C BCR sing 93 n n C11 C12 BCR doub 94 e n C11 H11C BCR sing 95 n n C33 H331 BCR sing 96 n n C33 H332 BCR sing 97 n n C33 H333 BCR sing 98 n n C31 H311 BCR sing 99 n n C31 H312 BCR sing 100 n n C31 H313 BCR sing 101 n n C32 H321 BCR sing 102 n n C32 H322 BCR sing 103 n n C32 H323 BCR sing 104 n n C34 H341 BCR sing 105 n n C34 H342 BCR sing 106 n n C34 H343 BCR sing 107 n n C12 C13 BCR sing 108 n n C12 H12C BCR sing 109 n n C13 C14 BCR doub 110 e n C13 C35 BCR sing 111 n n C14 C15 BCR sing 112 n n C14 H14C BCR sing 113 n n C15 C16 BCR doub 114 e n C15 H15C BCR sing 115 n n C16 C17 BCR sing 116 n n C16 H16C BCR sing 117 n n C17 C18 BCR doub 118 e n C17 H17C BCR sing 119 n n C18 C19 BCR sing 120 n n C18 C36 BCR sing 121 n n C19 C20 BCR doub 122 e n C19 H19C BCR sing 123 n n C20 C21 BCR sing 124 n n C20 H20C BCR sing 125 n n C21 C22 BCR doub 126 e n C21 H21C BCR sing 127 n n C22 C23 BCR sing 128 n n C22 C37 BCR sing 129 n n C23 C24 BCR doub 130 e n C23 H23C BCR sing 131 n n C24 C25 BCR sing 132 n n C24 H24C BCR sing 133 n n C25 C26 BCR doub 134 n n C25 C30 BCR sing 135 n n C26 C27 BCR sing 136 n n C26 C38 BCR sing 137 n n C27 C28 BCR sing 138 n n C27 H271 BCR sing 139 n n C27 H272 BCR sing 140 n n C28 C29 BCR sing 141 n n C28 H281 BCR sing 142 n n C28 H282 BCR sing 143 n n C29 C30 BCR sing 144 n n C29 H291 BCR sing 145 n n C29 H292 BCR sing 146 n n C30 C39 BCR sing 147 n n C30 C40 BCR sing 148 n n C35 H351 BCR sing 149 n n C35 H352 BCR sing 150 n n C35 H353 BCR sing 151 n n C36 H361 BCR sing 152 n n C36 H362 BCR sing 153 n n C36 H363 BCR sing 154 n n C37 H371 BCR sing 155 n n C37 H372 BCR sing 156 n n C37 H373 BCR sing 157 n n C38 H381 BCR sing 158 n n C38 H382 BCR sing 159 n n C38 H383 BCR sing 160 n n C39 H391 BCR sing 161 n n C39 H392 BCR sing 162 n n C39 H393 BCR sing 163 n n C40 H401 BCR sing 164 n n C40 H402 BCR sing 165 n n C40 H403 BCR sing 166 n n # _atom_sites.entry_id 7DXA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code O 15 SQD a 1 401 401 SQD SQD . P 16 CLA a 1 402 402 CLA CLA . Q 16 CLA a 1 403 403 CLA CLA . R 17 PHO a 1 404 404 PHO PHO . S 17 PHO a 1 405 405 PHO PHO . T 16 CLA a 1 406 406 CLA CLA . U 18 BCR a 1 407 407 BCR BCR . V 19 CL a 1 408 408 CL CL . W 20 MGE a 1 409 409 MGE MGE . X 16 CLA b 1 601 601 CLA CLA . Y 16 CLA b 1 602 602 CLA CLA . Z 16 CLA b 1 603 603 CLA CLA . AA 16 CLA b 1 604 604 CLA CLA . BA 16 CLA b 1 605 605 CLA CLA . CA 16 CLA b 1 606 606 CLA CLA . DA 16 CLA b 1 607 607 CLA CLA . EA 16 CLA b 1 608 608 CLA CLA . FA 16 CLA b 1 609 609 CLA CLA . GA 16 CLA b 1 610 610 CLA CLA . HA 16 CLA b 1 611 611 CLA CLA . IA 16 CLA b 1 612 612 CLA CLA . JA 16 CLA b 1 613 613 CLA CLA . KA 16 CLA b 1 614 614 CLA CLA . LA 16 CLA b 1 615 615 CLA CLA . MA 16 CLA b 1 616 616 CLA CLA . NA 18 BCR b 1 617 617 BCR BCR . OA 18 BCR b 1 618 618 BCR BCR . PA 18 BCR b 1 619 619 BCR BCR . QA 20 MGE b 1 620 620 MGE MGE . RA 21 UNL b 1 621 621 UNL UNL . SA 20 MGE b 1 622 622 MGE MGE . TA 22 LMT b 1 623 623 LMT LMT . UA 16 CLA d 1 401 401 CLA CLA . VA 22 LMT d 1 402 402 LMT LMT . WA 23 FE2 d 1 403 403 FE2 FE2 . XA 16 CLA d 1 404 404 CLA CLA . YA 16 CLA d 1 405 405 CLA CLA . ZA 24 PQ9 d 1 406 406 PQ9 PQ9 . AB 18 BCR d 1 407 407 BCR BCR . BB 20 MGE d 1 408 408 MGE MGE . CB 20 MGE d 1 409 409 MGE MGE . DB 20 MGE d 1 410 410 MGE MGE . EB 25 HTG d 1 411 411 HTG HTG . FB 26 DGD d 1 412 412 DGD DGD . GB 27 HEM e 1 101 101 HEM HEM . HB 18 BCR h 1 101 101 BCR BCR . IB 15 SQD l 1 101 101 SQD SQD . JB 20 MGE m 1 101 101 MGE MGE . KB 22 LMT t 1 101 101 LMT LMT . LB 21 UNL x 1 101 101 UNL UNL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BCR . . . NA 18 116.561 137.336 154.104 1 33.81 ? C1 BCR 617 b 1 HETATM 2 C C2 BCR . . . NA 18 116.843 138.765 153.668 1 33.81 ? C2 BCR 617 b 1 HETATM 3 C C3 BCR . . . NA 18 118.344 138.986 153.546 1 33.81 ? C3 BCR 617 b 1 HETATM 4 C C4 BCR . . . NA 18 119.041 138.804 154.889 1 33.81 ? C4 BCR 617 b 1 HETATM 5 C C5 BCR . . . NA 18 118.37 137.748 155.727 1 33.81 ? C5 BCR 617 b 1 HETATM 6 C C6 BCR . . . NA 18 117.567 136.854 155.131 1 33.81 ? C6 BCR 617 b 1 HETATM 7 C C7 BCR . . . NA 18 117.654 135.408 155.423 1 33.81 ? C7 BCR 617 b 1 HETATM 8 C C8 BCR . . . NA 18 118.805 134.769 155.216 1 33.81 ? C8 BCR 617 b 1 HETATM 9 C C9 BCR . . . NA 18 118.961 133.33 155.478 1 33.81 ? C9 BCR 617 b 1 HETATM 10 C C10 BCR . . . NA 18 120.163 132.791 155.252 1 33.81 ? C10 BCR 617 b 1 HETATM 11 C C11 BCR . . . NA 18 120.452 131.386 155.49 1 33.81 ? C11 BCR 617 b 1 HETATM 12 C C33 BCR . . . NA 18 118.595 137.787 157.21 1 33.81 ? C33 BCR 617 b 1 HETATM 13 C C31 BCR . . . NA 18 116.626 136.445 152.869 1 33.81 ? C31 BCR 617 b 1 HETATM 14 C C32 BCR . . . NA 18 115.172 137.273 154.712 1 33.81 ? C32 BCR 617 b 1 HETATM 15 C C34 BCR . . . NA 18 117.809 132.506 155.965 1 33.81 ? C34 BCR 617 b 1 HETATM 16 C C12 BCR . . . NA 18 121.628 130.907 155.104 1 33.81 ? C12 BCR 617 b 1 HETATM 17 C C13 BCR . . . NA 18 121.989 129.503 155.353 1 33.81 ? C13 BCR 617 b 1 HETATM 18 C C14 BCR . . . NA 18 123.231 129.105 155.054 1 33.81 ? C14 BCR 617 b 1 HETATM 19 C C15 BCR . . . NA 18 123.703 127.748 155.3 1 33.81 ? C15 BCR 617 b 1 HETATM 20 C C16 BCR . . . NA 18 124.934 127.42 154.925 1 33.81 ? C16 BCR 617 b 1 HETATM 21 C C17 BCR . . . NA 18 125.436 126.083 155.206 1 33.81 ? C17 BCR 617 b 1 HETATM 22 C C18 BCR . . . NA 18 126.676 125.694 154.884 1 33.81 ? C18 BCR 617 b 1 HETATM 23 C C19 BCR . . . NA 18 127.078 124.328 155.253 1 33.81 ? C19 BCR 617 b 1 HETATM 24 C C20 BCR . . . NA 18 128.338 123.925 155.284 1 33.81 ? C20 BCR 617 b 1 HETATM 25 C C21 BCR . . . NA 18 128.539 122.541 155.677 1 33.81 ? C21 BCR 617 b 1 HETATM 26 C C22 BCR . . . NA 18 129.735 121.961 155.777 1 33.81 ? C22 BCR 617 b 1 HETATM 27 C C23 BCR . . . NA 18 129.786 120.557 156.203 1 33.81 ? C23 BCR 617 b 1 HETATM 28 C C24 BCR . . . NA 18 130.911 119.907 156.481 1 33.81 ? C24 BCR 617 b 1 HETATM 29 C C25 BCR . . . NA 18 130.893 118.487 156.912 1 33.81 ? C25 BCR 617 b 1 HETATM 30 C C26 BCR . . . NA 18 130.099 118.021 157.887 1 33.81 ? C26 BCR 617 b 1 HETATM 31 C C27 BCR . . . NA 18 129.347 116.737 157.641 1 33.81 ? C27 BCR 617 b 1 HETATM 32 C C28 BCR . . . NA 18 130.143 115.759 156.784 1 33.81 ? C28 BCR 617 b 1 HETATM 33 C C29 BCR . . . NA 18 131.624 116.092 156.682 1 33.81 ? C29 BCR 617 b 1 HETATM 34 C C30 BCR . . . NA 18 131.841 117.532 156.23 1 33.81 ? C30 BCR 617 b 1 HETATM 35 C C35 BCR . . . NA 18 120.985 128.562 155.946 1 33.81 ? C35 BCR 617 b 1 HETATM 36 C C36 BCR . . . NA 18 127.62 126.61 154.172 1 33.81 ? C36 BCR 617 b 1 HETATM 37 C C37 BCR . . . NA 18 130.986 122.709 155.479 1 33.81 ? C37 BCR 617 b 1 HETATM 38 C C38 BCR . . . NA 18 129.995 118.665 159.244 1 33.81 ? C38 BCR 617 b 1 HETATM 39 C C39 BCR . . . NA 18 131.649 117.613 154.724 1 33.81 ? C39 BCR 617 b 1 HETATM 40 C C40 BCR . . . NA 18 133.241 117.98 156.605 1 33.81 ? C40 BCR 617 b 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 40 #