data_7DZ0 # _model_server_result.job_id D6pOrRH1b0dOgLVGw5hQPA _model_server_result.datetime_utc '2025-01-11 03:50:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dz0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":303}' # _entry.id 7DZ0 # _exptl.entry_id 7DZ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.204 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-but-3-enyl-5-methyl-imidazole-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7DZ0 _cell.length_a 45.804 _cell.length_b 90.128 _cell.length_c 125.43 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DZ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 83 A HIS 114 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc2 A ND1 HIS 85 A HIS 116 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc3 A OD2 ASP 87 A ASP 118 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc4 A NE2 HIS 148 A HIS 179 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc5 A SG CYS 167 A CYS 198 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc6 A NE2 HIS 209 A HIS 240 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc7 D ZN ZN . A ZN 302 1_555 E O03 HQ0 . A HQ0 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc8 D ZN ZN . A ZN 302 1_555 E N05 HQ0 . A HQ0 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc9 D ZN ZN . A ZN 302 1_555 I O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc10 B NE2 HIS 83 B HIS 114 1_555 F ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc11 B ND1 HIS 85 B HIS 116 1_555 F ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? metalc ? metalc12 B OD2 ASP 87 B ASP 118 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc13 B NE2 HIS 148 B HIS 179 1_555 F ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.883 ? metalc ? metalc14 B SG CYS 167 B CYS 198 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc15 B NE2 HIS 209 B HIS 240 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc16 F ZN ZN . B ZN 301 1_555 J O HOH . B HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? metalc ? metalc17 G ZN ZN . B ZN 302 1_555 H O03 HQ0 . B HQ0 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc18 G ZN ZN . B ZN 302 1_555 H N05 HQ0 . B HQ0 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc19 G ZN ZN . B ZN 302 1_555 J O HOH . B HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? # _chem_comp.formula 'C9 H12 N2 O2' _chem_comp.formula_weight 180.204 _chem_comp.id HQ0 _chem_comp.mon_nstd_flag . _chem_comp.name '1-but-3-enyl-5-methyl-imidazole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 HQ0 doub 152 n n C10 C11 HQ0 sing 153 n n C10 N09 HQ0 sing 154 n n C02 O03 HQ0 sing 155 n n C02 C04 HQ0 sing 156 n n C11 C12 HQ0 sing 157 n n N09 C04 HQ0 sing 158 n y N09 C07 HQ0 sing 159 n y C04 N05 HQ0 doub 160 n y C07 C08 HQ0 sing 161 n n C07 C06 HQ0 doub 162 n y N05 C06 HQ0 sing 163 n y C12 C13 HQ0 doub 164 n n O03 H1 HQ0 sing 165 n n C06 H2 HQ0 sing 166 n n C08 H3 HQ0 sing 167 n n C08 H4 HQ0 sing 168 n n C08 H5 HQ0 sing 169 n n C10 H6 HQ0 sing 170 n n C10 H7 HQ0 sing 171 n n C11 H8 HQ0 sing 172 n n C11 H9 HQ0 sing 173 n n C12 H10 HQ0 sing 174 n n C13 H11 HQ0 sing 175 n n C13 H12 HQ0 sing 176 n n # _atom_sites.entry_id 7DZ0 _atom_sites.fract_transf_matrix[1][1] 0.021832 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011095 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007973 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 301 ZN ZN . D 2 ZN A 1 302 302 ZN ZN . E 3 HQ0 A 1 303 401 HQ0 392 . F 2 ZN B 1 301 303 ZN ZN . G 2 ZN B 1 302 304 ZN ZN . H 3 HQ0 B 1 303 402 HQ0 392 . I 4 HOH A 1 401 4 HOH HOH . I 4 HOH A 2 402 3 HOH HOH . I 4 HOH A 3 403 7 HOH HOH . I 4 HOH A 4 404 5 HOH HOH . J 4 HOH B 1 401 8 HOH HOH . J 4 HOH B 2 402 6 HOH HOH . J 4 HOH B 3 403 9 HOH HOH . J 4 HOH B 4 404 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 HQ0 . . . H 3 37.39 9.218 102.396 1 23.98 ? O01 HQ0 303 B 1 HETATM 2 C C02 HQ0 . . . H 3 37.4 9.731 103.542 1 16.01 ? C02 HQ0 303 B 1 HETATM 3 O O03 HQ0 . . . H 3 38.307 10.516 103.931 1 14.08 -1 O03 HQ0 303 B 1 HETATM 4 C C04 HQ0 . . . H 3 36.306 9.413 104.526 1 15.43 ? C04 HQ0 303 B 1 HETATM 5 N N05 HQ0 . . . H 3 36.021 10.233 105.506 1 12.94 ? N05 HQ0 303 B 1 HETATM 6 C C06 HQ0 . . . H 3 35.049 9.678 106.204 1 14.9 ? C06 HQ0 303 B 1 HETATM 7 C C07 HQ0 . . . H 3 34.744 8.467 105.608 1 13.26 ? C07 HQ0 303 B 1 HETATM 8 C C08 HQ0 . . . H 3 33.697 7.459 106.039 1 14.29 ? C08 HQ0 303 B 1 HETATM 9 N N09 HQ0 . . . H 3 35.541 8.331 104.582 1 22.72 ? N09 HQ0 303 B 1 HETATM 10 C C10 HQ0 . . . H 3 35.518 7.17 103.708 1 23.92 ? C10 HQ0 303 B 1 HETATM 11 C C11 HQ0 . . . H 3 36.56 6.124 104.107 1 19.01 ? C11 HQ0 303 B 1 HETATM 12 C C12 HQ0 . . . H 3 36.804 5.969 105.607 1 14.56 ? C12 HQ0 303 B 1 HETATM 13 C C13 HQ0 . . . H 3 37.857 5.298 106.036 1 16.26 ? C13 HQ0 303 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #