data_7DZ6 # _model_server_result.job_id lWCK_DTj34ev-D4Isfg13Q _model_server_result.datetime_utc '2024-10-19 21:34:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7dz6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 7DZ6 # _exptl.entry_id 7DZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.387 _cell.angle_gamma 90 _cell.entry_id 7DZ6 _cell.length_a 62.558 _cell.length_b 87.141 _cell.length_c 128.881 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7DZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 H N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 146 A GLU 146 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc2 A OD2 ASP 179 A ASP 179 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc3 A OE1 GLU 240 A GLU 240 1_555 E MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc4 B OE2 GLU 146 B GLU 146 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc5 B OD2 ASP 179 B ASP 179 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc6 B OE1 GLU 240 B GLU 240 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc7 F MG MG . B MG 301 1_555 L O HOH . B HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc8 C OE2 GLU 146 C GLU 146 1_555 H MG MG . C MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc9 C OD2 ASP 179 C ASP 179 1_555 H MG MG . C MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc10 C OE1 GLU 240 C GLU 240 1_555 H MG MG . C MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc11 G O2 PSJ . C PSJ 301 1_555 H MG MG . C MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc12 G O3 PSJ . C PSJ 301 1_555 H MG MG . C MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc13 D OE2 GLU 146 D GLU 146 1_555 J MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc14 D OD2 ASP 179 D ASP 179 1_555 J MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc15 D OE1 GLU 240 D GLU 240 1_555 J MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc16 I O2 PSJ . D PSJ 301 1_555 J MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? metalc ? metalc17 I O3 PSJ . D PSJ 301 1_555 J MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7DZ6 _atom_sites.fract_transf_matrix[1][1] 0.015985 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002643 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011476 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 301 301 MG MG . F 2 MG B 1 301 301 MG MG . G 3 PSJ C 1 301 301 PSJ PSJ . H 2 MG C 1 302 302 MG MG . I 3 PSJ D 1 301 301 PSJ PSJ . J 2 MG D 1 302 302 MG MG . K 4 HOH A 1 401 401 HOH HOH . K 4 HOH A 2 402 402 HOH HOH . K 4 HOH A 3 403 406 HOH HOH . K 4 HOH A 4 404 403 HOH HOH . K 4 HOH A 5 405 405 HOH HOH . K 4 HOH A 6 406 403 HOH HOH . K 4 HOH A 7 407 404 HOH HOH . K 4 HOH A 8 408 408 HOH HOH . K 4 HOH A 9 409 407 HOH HOH . K 4 HOH A 10 410 409 HOH HOH . K 4 HOH A 11 411 411 HOH HOH . K 4 HOH A 12 412 410 HOH HOH . K 4 HOH A 13 413 412 HOH HOH . K 4 HOH A 14 414 416 HOH HOH . K 4 HOH A 15 415 413 HOH HOH . K 4 HOH A 16 416 414 HOH HOH . K 4 HOH A 17 417 415 HOH HOH . K 4 HOH A 18 418 417 HOH HOH . K 4 HOH A 19 419 419 HOH HOH . K 4 HOH A 20 420 418 HOH HOH . K 4 HOH A 21 421 420 HOH HOH . K 4 HOH A 22 422 421 HOH HOH . K 4 HOH A 23 423 422 HOH HOH . K 4 HOH A 24 424 425 HOH HOH . K 4 HOH A 25 425 424 HOH HOH . K 4 HOH A 26 426 423 HOH HOH . K 4 HOH A 27 427 427 HOH HOH . K 4 HOH A 28 428 426 HOH HOH . K 4 HOH A 29 429 428 HOH HOH . K 4 HOH A 30 430 429 HOH HOH . K 4 HOH A 31 431 430 HOH HOH . K 4 HOH A 32 432 431 HOH HOH . K 4 HOH A 33 433 432 HOH HOH . K 4 HOH A 34 434 433 HOH HOH . K 4 HOH A 35 435 434 HOH HOH . K 4 HOH A 36 436 435 HOH HOH . K 4 HOH A 37 437 436 HOH HOH . K 4 HOH A 38 438 438 HOH HOH . K 4 HOH A 39 439 437 HOH HOH . K 4 HOH A 40 440 439 HOH HOH . K 4 HOH A 41 441 440 HOH HOH . K 4 HOH A 42 442 441 HOH HOH . K 4 HOH A 43 443 442 HOH HOH . L 4 HOH B 1 401 401 HOH HOH . L 4 HOH B 2 402 403 HOH HOH . L 4 HOH B 3 403 404 HOH HOH . L 4 HOH B 4 404 402 HOH HOH . L 4 HOH B 5 405 405 HOH HOH . L 4 HOH B 6 406 406 HOH HOH . L 4 HOH B 7 407 407 HOH HOH . L 4 HOH B 8 408 408 HOH HOH . L 4 HOH B 9 409 409 HOH HOH . L 4 HOH B 10 410 410 HOH HOH . L 4 HOH B 11 411 412 HOH HOH . L 4 HOH B 12 412 415 HOH HOH . L 4 HOH B 13 413 413 HOH HOH . L 4 HOH B 14 414 411 HOH HOH . L 4 HOH B 15 415 414 HOH HOH . L 4 HOH B 16 416 416 HOH HOH . L 4 HOH B 17 417 418 HOH HOH . L 4 HOH B 18 418 417 HOH HOH . L 4 HOH B 19 419 419 HOH HOH . L 4 HOH B 20 420 420 HOH HOH . L 4 HOH B 21 421 421 HOH HOH . L 4 HOH B 22 422 424 HOH HOH . L 4 HOH B 23 423 422 HOH HOH . L 4 HOH B 24 424 423 HOH HOH . L 4 HOH B 25 425 426 HOH HOH . L 4 HOH B 26 426 425 HOH HOH . L 4 HOH B 27 427 428 HOH HOH . L 4 HOH B 28 428 427 HOH HOH . L 4 HOH B 29 429 430 HOH HOH . L 4 HOH B 30 430 429 HOH HOH . L 4 HOH B 31 431 431 HOH HOH . L 4 HOH B 32 432 432 HOH HOH . L 4 HOH B 33 433 433 HOH HOH . M 4 HOH C 1 401 401 HOH HOH . M 4 HOH C 2 402 402 HOH HOH . M 4 HOH C 3 403 406 HOH HOH . M 4 HOH C 4 404 405 HOH HOH . M 4 HOH C 5 405 404 HOH HOH . M 4 HOH C 6 406 408 HOH HOH . M 4 HOH C 7 407 407 HOH HOH . M 4 HOH C 8 408 410 HOH HOH . M 4 HOH C 9 409 409 HOH HOH . M 4 HOH C 10 410 413 HOH HOH . M 4 HOH C 11 411 416 HOH HOH . M 4 HOH C 12 412 411 HOH HOH . M 4 HOH C 13 413 418 HOH HOH . M 4 HOH C 14 414 414 HOH HOH . M 4 HOH C 15 415 412 HOH HOH . M 4 HOH C 16 416 422 HOH HOH . M 4 HOH C 17 417 419 HOH HOH . M 4 HOH C 18 418 415 HOH HOH . M 4 HOH C 19 419 420 HOH HOH . M 4 HOH C 20 420 423 HOH HOH . M 4 HOH C 21 421 421 HOH HOH . M 4 HOH C 22 422 425 HOH HOH . M 4 HOH C 23 423 427 HOH HOH . M 4 HOH C 24 424 424 HOH HOH . M 4 HOH C 25 425 428 HOH HOH . M 4 HOH C 26 426 429 HOH HOH . M 4 HOH C 27 427 430 HOH HOH . M 4 HOH C 28 428 417 HOH HOH . M 4 HOH C 29 429 426 HOH HOH . M 4 HOH C 30 430 433 HOH HOH . M 4 HOH C 31 431 432 HOH HOH . M 4 HOH C 32 432 434 HOH HOH . M 4 HOH C 33 433 431 HOH HOH . M 4 HOH C 34 434 435 HOH HOH . M 4 HOH C 35 435 436 HOH HOH . M 4 HOH C 36 436 437 HOH HOH . M 4 HOH C 37 437 443 HOH HOH . M 4 HOH C 38 438 445 HOH HOH . M 4 HOH C 39 439 438 HOH HOH . M 4 HOH C 40 440 440 HOH HOH . M 4 HOH C 41 441 442 HOH HOH . M 4 HOH C 42 442 441 HOH HOH . M 4 HOH C 43 443 444 HOH HOH . M 4 HOH C 44 444 439 HOH HOH . M 4 HOH C 45 445 446 HOH HOH . M 4 HOH C 46 446 447 HOH HOH . M 4 HOH C 47 447 448 HOH HOH . M 4 HOH C 48 448 449 HOH HOH . M 4 HOH C 49 449 450 HOH HOH . M 4 HOH C 50 450 451 HOH HOH . M 4 HOH C 51 451 452 HOH HOH . N 4 HOH D 1 401 401 HOH HOH . N 4 HOH D 2 402 402 HOH HOH . N 4 HOH D 3 403 403 HOH HOH . N 4 HOH D 4 404 404 HOH HOH . N 4 HOH D 5 405 405 HOH HOH . N 4 HOH D 6 406 406 HOH HOH . N 4 HOH D 7 407 411 HOH HOH . N 4 HOH D 8 408 409 HOH HOH . N 4 HOH D 9 409 410 HOH HOH . N 4 HOH D 10 410 407 HOH HOH . N 4 HOH D 11 411 413 HOH HOH . N 4 HOH D 12 412 414 HOH HOH . N 4 HOH D 13 413 408 HOH HOH . N 4 HOH D 14 414 427 HOH HOH . N 4 HOH D 15 415 412 HOH HOH . N 4 HOH D 16 416 415 HOH HOH . N 4 HOH D 17 417 417 HOH HOH . N 4 HOH D 18 418 416 HOH HOH . N 4 HOH D 19 419 418 HOH HOH . N 4 HOH D 20 420 419 HOH HOH . N 4 HOH D 21 421 422 HOH HOH . N 4 HOH D 22 422 421 HOH HOH . N 4 HOH D 23 423 420 HOH HOH . N 4 HOH D 24 424 425 HOH HOH . N 4 HOH D 25 425 423 HOH HOH . N 4 HOH D 26 426 424 HOH HOH . N 4 HOH D 27 427 426 HOH HOH . N 4 HOH D 28 428 428 HOH HOH . N 4 HOH D 29 429 430 HOH HOH . N 4 HOH D 30 430 429 HOH HOH . N 4 HOH D 31 431 431 HOH HOH . N 4 HOH D 32 432 432 HOH HOH . N 4 HOH D 33 433 433 HOH HOH . N 4 HOH D 34 434 434 HOH HOH . N 4 HOH D 35 435 435 HOH HOH . N 4 HOH D 36 436 436 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -17.597 _atom_site.Cartn_y -6.64 _atom_site.Cartn_z -49.71 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #