data_7E0P
#
_model_server_result.job_id            maeZ8QI96DQ5XFGYnnqtUQ 
_model_server_result.datetime_utc      '2024-12-21 05:51:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7e0p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":502}' 
#
_entry.id    7E0P 
#
_exptl.entry_id    7E0P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7E0P 
_cell.length_a            85.746 
_cell.length_b            91.561 
_cell.length_c            126.767 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7E0P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,H 1 1 
B,E,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 297 A CYS 308 1_555 B SG CYS 297 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc1 A NE2 HIS 335 A HIS 346 1_555 D FE HEM . A HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc2 C N07 HU0 . A HU0 501 1_555 D FE HEM . A HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? 
metalc ? metalc3 B NE2 HIS 335 B HIS 346 1_555 F FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? 
metalc ? metalc4 E N07 HU0 . B HU0 501 1_555 F FE HEM . B HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 136 n n 
CHA C4D HEM doub 137 n n 
CHA HHA HEM sing 138 n n 
CHB C4A HEM sing 139 n n 
CHB C1B HEM doub 140 n n 
CHB HHB HEM sing 141 n n 
CHC C4B HEM sing 142 n n 
CHC C1C HEM doub 143 n n 
CHC HHC HEM sing 144 n n 
CHD C4C HEM doub 145 n n 
CHD C1D HEM sing 146 n n 
CHD HHD HEM sing 147 n n 
C1A C2A HEM doub 148 n y 
C1A NA HEM sing 149 n y 
C2A C3A HEM sing 150 n y 
C2A CAA HEM sing 151 n n 
C3A C4A HEM doub 152 n y 
C3A CMA HEM sing 153 n n 
C4A NA HEM sing 154 n y 
CMA HMA HEM sing 155 n n 
CMA HMAA HEM sing 156 n n 
CMA HMAB HEM sing 157 n n 
CAA CBA HEM sing 158 n n 
CAA HAA HEM sing 159 n n 
CAA HAAA HEM sing 160 n n 
CBA CGA HEM sing 161 n n 
CBA HBA HEM sing 162 n n 
CBA HBAA HEM sing 163 n n 
CGA O1A HEM doub 164 n n 
CGA O2A HEM sing 165 n n 
C1B C2B HEM sing 166 n n 
C1B NB HEM sing 167 n n 
C2B C3B HEM doub 168 n n 
C2B CMB HEM sing 169 n n 
C3B C4B HEM sing 170 n n 
C3B CAB HEM sing 171 n n 
C4B NB HEM doub 172 n n 
CMB HMB HEM sing 173 n n 
CMB HMBA HEM sing 174 n n 
CMB HMBB HEM sing 175 n n 
CAB CBB HEM doub 176 n n 
CAB HAB HEM sing 177 n n 
CBB HBB HEM sing 178 n n 
CBB HBBA HEM sing 179 n n 
C1C C2C HEM sing 180 n y 
C1C NC HEM sing 181 n y 
C2C C3C HEM doub 182 n y 
C2C CMC HEM sing 183 n n 
C3C C4C HEM sing 184 n y 
C3C CAC HEM sing 185 n n 
C4C NC HEM sing 186 n y 
CMC HMC HEM sing 187 n n 
CMC HMCA HEM sing 188 n n 
CMC HMCB HEM sing 189 n n 
CAC CBC HEM doub 190 n n 
CAC HAC HEM sing 191 n n 
CBC HBC HEM sing 192 n n 
CBC HBCA HEM sing 193 n n 
C1D C2D HEM sing 194 n n 
C1D ND HEM doub 195 n n 
C2D C3D HEM doub 196 n n 
C2D CMD HEM sing 197 n n 
C3D C4D HEM sing 198 n n 
C3D CAD HEM sing 199 n n 
C4D ND HEM sing 200 n n 
CMD HMD HEM sing 201 n n 
CMD HMDA HEM sing 202 n n 
CMD HMDB HEM sing 203 n n 
CAD CBD HEM sing 204 n n 
CAD HAD HEM sing 205 n n 
CAD HADA HEM sing 206 n n 
CBD CGD HEM sing 207 n n 
CBD HBD HEM sing 208 n n 
CBD HBDA HEM sing 209 n n 
CGD O1D HEM doub 210 n n 
CGD O2D HEM sing 211 n n 
O2A H2A HEM sing 212 n n 
O2D H2D HEM sing 213 n n 
FE NA HEM sing 214 n n 
FE NB HEM sing 215 n n 
FE NC HEM sing 216 n n 
FE ND HEM sing 217 n n 
#
_atom_sites.entry_id                     7E0P 
_atom_sites.fract_transf_matrix[1][1]    0.011662 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010922 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007888 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HU0 A 1 501 402 HU0 L84 . 
D 3 HEM A 1 502 403 HEM HEM . 
E 2 HU0 B 1 501 402 HU0 L84 . 
F 3 HEM B 1 502 403 HEM HEM . 
G 4 ACY B 1 503 404 ACY ACY . 
H 5 HOH A 1 601 15 HOH HOH . 
H 5 HOH A 2 602 9 HOH HOH . 
H 5 HOH A 3 603 2 HOH HOH . 
H 5 HOH A 4 604 6 HOH HOH . 
H 5 HOH A 5 605 16 HOH HOH . 
H 5 HOH A 6 606 14 HOH HOH . 
I 5 HOH B 1 601 8 HOH HOH . 
I 5 HOH B 2 602 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . F 3 21.665 3.693 -19.431 1 72.7 ? CHA HEM 502 B 1 
HETATM 2 C CHB HEM . . . F 3 21.566 4.902 -14.741 1 61.5 ? CHB HEM 502 B 1 
HETATM 3 C CHC HEM . . . F 3 24.724 8.477 -15.799 1 69.89 ? CHC HEM 502 B 1 
HETATM 4 C CHD HEM . . . F 3 23.152 8.219 -20.376 1 61.89 ? CHD HEM 502 B 1 
HETATM 5 C C1A HEM . . . F 3 21.5 3.642 -18.063 1 74.5 ? C1A HEM 502 B 1 
HETATM 6 C C2A HEM . . . F 3 21.037 2.52 -17.348 1 67.98 ? C2A HEM 502 B 1 
HETATM 7 C C3A HEM . . . F 3 21.005 2.849 -16.029 1 76.13 ? C3A HEM 502 B 1 
HETATM 8 C C4A HEM . . . F 3 21.443 4.184 -15.914 1 73.27 ? C4A HEM 502 B 1 
HETATM 9 C CMA HEM . . . F 3 20.575 1.952 -14.897 1 73.48 ? CMA HEM 502 B 1 
HETATM 10 C CAA HEM . . . F 3 20.648 1.19 -17.94 1 63.5 ? CAA HEM 502 B 1 
HETATM 11 C CBA HEM . . . F 3 19.179 1.231 -18.364 1 68.37 ? CBA HEM 502 B 1 
HETATM 12 C CGA HEM . . . F 3 18.311 1.436 -17.15 1 72.09 ? CGA HEM 502 B 1 
HETATM 13 O O1A HEM . . . F 3 17.823 2.563 -16.914 1 74.15 ? O1A HEM 502 B 1 
HETATM 14 O O2A HEM . . . F 3 18.078 0.48 -16.378 1 79.21 ? O2A HEM 502 B 1 
HETATM 15 C C1B HEM . . . F 3 22.496 5.947 -14.637 1 72.06 ? C1B HEM 502 B 1 
HETATM 16 C C2B HEM . . . F 3 22.966 6.435 -13.389 1 72.11 ? C2B HEM 502 B 1 
HETATM 17 C C3B HEM . . . F 3 23.853 7.437 -13.655 1 73.32 ? C3B HEM 502 B 1 
HETATM 18 C C4B HEM . . . F 3 23.915 7.551 -15.132 1 64.3 ? C4B HEM 502 B 1 
HETATM 19 C CMB HEM . . . F 3 22.561 5.939 -12.025 1 69.59 ? CMB HEM 502 B 1 
HETATM 20 C CAB HEM . . . F 3 24.599 8.244 -12.673 1 82.81 ? CAB HEM 502 B 1 
HETATM 21 C CBB HEM . . . F 3 25.914 8.09 -12.549 1 92.62 ? CBB HEM 502 B 1 
HETATM 22 C C1C HEM . . . F 3 24.567 8.756 -17.152 1 65.77 ? C1C HEM 502 B 1 
HETATM 23 C C2C HEM . . . F 3 25.222 9.764 -17.878 1 75.1 ? C2C HEM 502 B 1 
HETATM 24 C C3C HEM . . . F 3 24.773 9.691 -19.188 1 70.14 ? C3C HEM 502 B 1 
HETATM 25 C C4C HEM . . . F 3 23.834 8.624 -19.253 1 64.61 ? C4C HEM 502 B 1 
HETATM 26 C CMC HEM . . . F 3 26.229 10.745 -17.332 1 77.67 ? CMC HEM 502 B 1 
HETATM 27 C CAC HEM . . . F 3 25.191 10.557 -20.304 1 83.81 ? CAC HEM 502 B 1 
HETATM 28 C CBC HEM . . . F 3 25.668 11.773 -20.061 1 85.14 ? CBC HEM 502 B 1 
HETATM 29 C C1D HEM . . . F 3 22.683 6.908 -20.487 1 71.89 ? C1D HEM 502 B 1 
HETATM 30 C C2D HEM . . . F 3 22.357 6.3 -21.782 1 78.99 ? C2D HEM 502 B 1 
HETATM 31 C C3D HEM . . . F 3 21.945 5.045 -21.518 1 76.81 ? C3D HEM 502 B 1 
HETATM 32 C C4D HEM . . . F 3 22.02 4.881 -20.062 1 74.62 ? C4D HEM 502 B 1 
HETATM 33 C CMD HEM . . . F 3 22.461 6.951 -23.137 1 82.15 ? CMD HEM 502 B 1 
HETATM 34 C CAD HEM . . . F 3 21.498 4.014 -22.521 1 75.1 ? CAD HEM 502 B 1 
HETATM 35 C CBD HEM . . . F 3 21.959 2.628 -22.069 1 79.44 ? CBD HEM 502 B 1 
HETATM 36 C CGD HEM . . . F 3 23.266 2.29 -22.737 1 73.8 ? CGD HEM 502 B 1 
HETATM 37 O O1D HEM . . . F 3 23.27 1.732 -23.857 1 76.11 ? O1D HEM 502 B 1 
HETATM 38 O O2D HEM . . . F 3 24.348 2.567 -22.172 1 69.87 ? O2D HEM 502 B 1 
HETATM 39 N NA HEM . . . F 3 21.742 4.651 -17.166 1 74.71 ? NA HEM 502 B 1 
HETATM 40 N NB HEM . . . F 3 23.078 6.627 -15.635 1 65.34 ? NB HEM 502 B 1 
HETATM 41 N NC HEM . . . F 3 23.735 8.081 -18.001 1 67.7 ? NC HEM 502 B 1 
HETATM 42 N ND HEM . . . F 3 22.462 6.02 -19.506 1 68.74 ? ND HEM 502 B 1 
HETATM 43 FE FE HEM . . . F 3 22.723 6.29 -17.68 1 74.49 ? FE HEM 502 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#