data_7E19 # _model_server_result.job_id gS48uvaqFJXqSJB3DagTuA _model_server_result.datetime_utc '2024-11-21 09:15:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e19 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7E19 # _exptl.entry_id 7E19 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 635.774 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(phenylmethyl) N-[(2S)-1-[[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]carbamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7E19 _cell.length_a 45.111 _cell.length_b 63.286 _cell.length_c 106.697 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E19 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -63.286 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C33 H41 N5 O6 S' _chem_comp.formula_weight 635.774 _chem_comp.id HUO _chem_comp.mon_nstd_flag . _chem_comp.name '(phenylmethyl) N-[(2S)-1-[[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C16 HUO doub 152 n y C17 C18 HUO sing 153 n y C16 C15 HUO sing 154 n y C18 C14 HUO doub 155 n y C14 C13 HUO sing 156 n y C14 S1 HUO sing 157 n y C15 C13 HUO doub 158 n y C13 N4 HUO sing 159 n y S1 C12 HUO sing 160 n y N4 C12 HUO doub 161 n y C12 C11 HUO sing 162 n n O3 C11 HUO doub 163 n n C11 C5 HUO sing 164 n n C22 C20 HUO sing 165 n n C5 N2 HUO sing 166 n n C5 C6 HUO sing 167 n n C19 C20 HUO sing 168 n n C19 C3 HUO sing 169 n n N2 C4 HUO sing 170 n n C21 C20 HUO sing 171 n n C6 C7 HUO sing 172 n n C4 O2 HUO doub 173 n n C4 C3 HUO sing 174 n n C3 N1 HUO sing 175 n n C7 C8 HUO sing 176 n n C7 C10 HUO sing 177 n n C8 C9 HUO sing 178 n n N1 C2 HUO sing 179 n n O4 C10 HUO doub 180 n n C10 N3 HUO sing 181 n n C9 N3 HUO sing 182 n n C2 O1 HUO doub 183 n n C2 C1 HUO sing 184 n n C26 C24 HUO sing 185 n n C1 C24 HUO sing 186 n n C1 N5 HUO sing 187 n n C24 C25 HUO sing 188 n n N5 C23 HUO sing 189 n n O6 C23 HUO doub 190 n n C23 O5 HUO sing 191 n n O5 C27 HUO sing 192 n n C27 C28 HUO sing 193 n n C29 C28 HUO doub 194 n y C29 C30 HUO sing 195 n y C28 C33 HUO sing 196 n y C30 C31 HUO doub 197 n y C33 C32 HUO doub 198 n y C31 C32 HUO sing 199 n y C8 H1 HUO sing 200 n n C8 H2 HUO sing 201 n n C5 H3 HUO sing 202 n n N3 H4 HUO sing 203 n n N1 H5 HUO sing 204 n n C6 H6 HUO sing 205 n n C6 H7 HUO sing 206 n n C1 H8 HUO sing 207 n n C15 H9 HUO sing 208 n n C16 H10 HUO sing 209 n n C17 H11 HUO sing 210 n n C18 H12 HUO sing 211 n n C19 H13 HUO sing 212 n n C19 H14 HUO sing 213 n n C20 H15 HUO sing 214 n n C21 H16 HUO sing 215 n n C21 H17 HUO sing 216 n n C21 H18 HUO sing 217 n n C22 H19 HUO sing 218 n n C22 H20 HUO sing 219 n n C22 H21 HUO sing 220 n n C24 H22 HUO sing 221 n n C25 H23 HUO sing 222 n n C25 H24 HUO sing 223 n n C25 H25 HUO sing 224 n n C26 H26 HUO sing 225 n n C26 H27 HUO sing 226 n n C26 H28 HUO sing 227 n n C27 H29 HUO sing 228 n n C27 H30 HUO sing 229 n n C29 H31 HUO sing 230 n n C3 H32 HUO sing 231 n n C30 H33 HUO sing 232 n n C31 H34 HUO sing 233 n n C32 H35 HUO sing 234 n n C33 H36 HUO sing 235 n n C7 H37 HUO sing 236 n n C9 H38 HUO sing 237 n n C9 H39 HUO sing 238 n n N2 H40 HUO sing 239 n n N5 H41 HUO sing 240 n n # _atom_sites.entry_id 7E19 _atom_sites.fract_transf_matrix[1][1] 0.022168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015801 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009372 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HUO A 1 401 401 HUO SH5 . C 3 HOH A 1 501 137 HOH HOH . C 3 HOH A 2 502 96 HOH HOH . C 3 HOH A 3 503 112 HOH HOH . C 3 HOH A 4 504 91 HOH HOH . C 3 HOH A 5 505 43 HOH HOH . C 3 HOH A 6 506 117 HOH HOH . C 3 HOH A 7 507 125 HOH HOH . C 3 HOH A 8 508 69 HOH HOH . C 3 HOH A 9 509 37 HOH HOH . C 3 HOH A 10 510 124 HOH HOH . C 3 HOH A 11 511 145 HOH HOH . C 3 HOH A 12 512 41 HOH HOH . C 3 HOH A 13 513 76 HOH HOH . C 3 HOH A 14 514 90 HOH HOH . C 3 HOH A 15 515 40 HOH HOH . C 3 HOH A 16 516 131 HOH HOH . C 3 HOH A 17 517 28 HOH HOH . C 3 HOH A 18 518 49 HOH HOH . C 3 HOH A 19 519 10 HOH HOH . C 3 HOH A 20 520 35 HOH HOH . C 3 HOH A 21 521 80 HOH HOH . C 3 HOH A 22 522 13 HOH HOH . C 3 HOH A 23 523 65 HOH HOH . C 3 HOH A 24 524 9 HOH HOH . C 3 HOH A 25 525 7 HOH HOH . C 3 HOH A 26 526 12 HOH HOH . C 3 HOH A 27 527 21 HOH HOH . C 3 HOH A 28 528 11 HOH HOH . C 3 HOH A 29 529 26 HOH HOH . C 3 HOH A 30 530 18 HOH HOH . C 3 HOH A 31 531 5 HOH HOH . C 3 HOH A 32 532 44 HOH HOH . C 3 HOH A 33 533 85 HOH HOH . C 3 HOH A 34 534 102 HOH HOH . C 3 HOH A 35 535 55 HOH HOH . C 3 HOH A 36 536 38 HOH HOH . C 3 HOH A 37 537 3 HOH HOH . C 3 HOH A 38 538 27 HOH HOH . C 3 HOH A 39 539 29 HOH HOH . C 3 HOH A 40 540 19 HOH HOH . C 3 HOH A 41 541 92 HOH HOH . C 3 HOH A 42 542 87 HOH HOH . C 3 HOH A 43 543 66 HOH HOH . C 3 HOH A 44 544 105 HOH HOH . C 3 HOH A 45 545 24 HOH HOH . C 3 HOH A 46 546 4 HOH HOH . C 3 HOH A 47 547 47 HOH HOH . C 3 HOH A 48 548 126 HOH HOH . C 3 HOH A 49 549 51 HOH HOH . C 3 HOH A 50 550 36 HOH HOH . C 3 HOH A 51 551 20 HOH HOH . C 3 HOH A 52 552 61 HOH HOH . C 3 HOH A 53 553 106 HOH HOH . C 3 HOH A 54 554 121 HOH HOH . C 3 HOH A 55 555 16 HOH HOH . C 3 HOH A 56 556 139 HOH HOH . C 3 HOH A 57 557 73 HOH HOH . C 3 HOH A 58 558 8 HOH HOH . C 3 HOH A 59 559 15 HOH HOH . C 3 HOH A 60 560 89 HOH HOH . C 3 HOH A 61 561 48 HOH HOH . C 3 HOH A 62 562 70 HOH HOH . C 3 HOH A 63 563 6 HOH HOH . C 3 HOH A 64 564 14 HOH HOH . C 3 HOH A 65 565 30 HOH HOH . C 3 HOH A 66 566 50 HOH HOH . C 3 HOH A 67 567 78 HOH HOH . C 3 HOH A 68 568 57 HOH HOH . C 3 HOH A 69 569 94 HOH HOH . C 3 HOH A 70 570 75 HOH HOH . C 3 HOH A 71 571 45 HOH HOH . C 3 HOH A 72 572 88 HOH HOH . C 3 HOH A 73 573 39 HOH HOH . C 3 HOH A 74 574 98 HOH HOH . C 3 HOH A 75 575 83 HOH HOH . C 3 HOH A 76 576 2 HOH HOH . C 3 HOH A 77 577 25 HOH HOH . C 3 HOH A 78 578 53 HOH HOH . C 3 HOH A 79 579 93 HOH HOH . C 3 HOH A 80 580 46 HOH HOH . C 3 HOH A 81 581 72 HOH HOH . C 3 HOH A 82 582 74 HOH HOH . C 3 HOH A 83 583 17 HOH HOH . C 3 HOH A 84 584 84 HOH HOH . C 3 HOH A 85 585 67 HOH HOH . C 3 HOH A 86 586 134 HOH HOH . C 3 HOH A 87 587 52 HOH HOH . C 3 HOH A 88 588 32 HOH HOH . C 3 HOH A 89 589 23 HOH HOH . C 3 HOH A 90 590 143 HOH HOH . C 3 HOH A 91 591 42 HOH HOH . C 3 HOH A 92 592 136 HOH HOH . C 3 HOH A 93 593 62 HOH HOH . C 3 HOH A 94 594 63 HOH HOH . C 3 HOH A 95 595 22 HOH HOH . C 3 HOH A 96 596 113 HOH HOH . C 3 HOH A 97 597 86 HOH HOH . C 3 HOH A 98 598 79 HOH HOH . C 3 HOH A 99 599 31 HOH HOH . C 3 HOH A 100 600 109 HOH HOH . C 3 HOH A 101 601 101 HOH HOH . C 3 HOH A 102 602 34 HOH HOH . C 3 HOH A 103 603 1 HOH HOH . C 3 HOH A 104 604 95 HOH HOH . C 3 HOH A 105 605 54 HOH HOH . C 3 HOH A 106 606 107 HOH HOH . C 3 HOH A 107 607 56 HOH HOH . C 3 HOH A 108 608 149 HOH HOH . C 3 HOH A 109 609 116 HOH HOH . C 3 HOH A 110 610 118 HOH HOH . C 3 HOH A 111 611 110 HOH HOH . C 3 HOH A 112 612 68 HOH HOH . C 3 HOH A 113 613 99 HOH HOH . C 3 HOH A 114 614 82 HOH HOH . C 3 HOH A 115 615 108 HOH HOH . C 3 HOH A 116 616 104 HOH HOH . C 3 HOH A 117 617 77 HOH HOH . C 3 HOH A 118 618 60 HOH HOH . C 3 HOH A 119 619 59 HOH HOH . C 3 HOH A 120 620 71 HOH HOH . C 3 HOH A 121 621 58 HOH HOH . C 3 HOH A 122 622 97 HOH HOH . C 3 HOH A 123 623 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 HUO . . . B 2 18.59 -21.874 -26.381 1 20.82 ? C8 HUO 401 A 1 HETATM 2 C C5 HUO . . . B 2 18.081 -19.91 -28.647 1 17.73 ? C5 HUO 401 A 1 HETATM 3 C C4 HUO . . . B 2 19.33 -18.093 -27.645 1 20.13 ? C4 HUO 401 A 1 HETATM 4 N N3 HUO . . . B 2 17.023 -22.374 -24.68 1 16.86 ? N3 HUO 401 A 1 HETATM 5 C C2 HUO . . . B 2 19.399 -17.003 -24.888 1 20.85 ? C2 HUO 401 A 1 HETATM 6 N N1 HUO . . . B 2 19.981 -16.517 -25.971 1 17.43 ? N1 HUO 401 A 1 HETATM 7 C C6 HUO . . . B 2 16.98 -20.619 -27.84 1 18.13 ? C6 HUO 401 A 1 HETATM 8 C C1 HUO . . . B 2 20.19 -16.782 -23.612 1 19.08 ? C1 HUO 401 A 1 HETATM 9 C C10 HUO . . . B 2 16.471 -21.467 -25.498 1 18.79 ? C10 HUO 401 A 1 HETATM 10 C C11 HUO . . . B 2 17.945 -20.046 -30.177 1 20.86 ? C11 HUO 401 A 1 HETATM 11 C C12 HUO . . . B 2 18.898 -19.36 -30.811 1 21.31 ? C12 HUO 401 A 1 HETATM 12 C C13 HUO . . . B 2 21.02 -19.119 -31.619 1 29.24 ? C13 HUO 401 A 1 HETATM 13 C C14 HUO . . . B 2 20.547 -17.904 -31.946 1 26.64 ? C14 HUO 401 A 1 HETATM 14 C C15 HUO . . . B 2 22.281 -19.446 -31.927 1 32.28 ? C15 HUO 401 A 1 HETATM 15 C C16 HUO . . . B 2 23.132 -18.56 -32.577 1 32.9 ? C16 HUO 401 A 1 HETATM 16 C C17 HUO . . . B 2 22.636 -17.309 -32.903 1 30.99 ? C17 HUO 401 A 1 HETATM 17 C C18 HUO . . . B 2 21.318 -17.012 -32.569 1 30.25 ? C18 HUO 401 A 1 HETATM 18 C C19 HUO . . . B 2 20.11 -15.802 -28.302 1 21.47 ? C19 HUO 401 A 1 HETATM 19 C C20 HUO . . . B 2 20.073 -14.321 -27.919 1 21.66 ? C20 HUO 401 A 1 HETATM 20 C C21 HUO . . . B 2 18.627 -13.826 -28.004 1 23.01 ? C21 HUO 401 A 1 HETATM 21 C C22 HUO . . . B 2 20.893 -13.523 -28.91 1 23.99 ? C22 HUO 401 A 1 HETATM 22 C C23 HUO . . . B 2 19.78 -14.788 -22.248 1 24.34 ? C23 HUO 401 A 1 HETATM 23 C C24 HUO . . . B 2 20.336 -18.09 -22.888 1 20.37 ? C24 HUO 401 A 1 HETATM 24 C C25 HUO . . . B 2 21.225 -17.85 -21.653 1 21.28 ? C25 HUO 401 A 1 HETATM 25 C C26 HUO . . . B 2 20.941 -19.122 -23.828 1 20.7 ? C26 HUO 401 A 1 HETATM 26 C C27 HUO . . . B 2 19.589 -12.965 -20.859 1 28.46 ? C27 HUO 401 A 1 HETATM 27 C C28 HUO . . . B 2 20.535 -13.353 -19.704 1 25.58 ? C28 HUO 401 A 1 HETATM 28 C C29 HUO . . . B 2 21.924 -13.353 -19.907 1 24.57 ? C29 HUO 401 A 1 HETATM 29 C C3 HUO . . . B 2 19.332 -16.621 -27.264 1 18.85 ? C3 HUO 401 A 1 HETATM 30 C C30 HUO . . . B 2 22.796 -13.691 -18.878 1 22.48 ? C30 HUO 401 A 1 HETATM 31 C C31 HUO . . . B 2 22.251 -14.03 -17.637 1 28.49 ? C31 HUO 401 A 1 HETATM 32 C C32 HUO . . . B 2 20.869 -14.04 -17.423 1 27.92 ? C32 HUO 401 A 1 HETATM 33 C C33 HUO . . . B 2 19.999 -13.695 -18.464 1 27.53 ? C33 HUO 401 A 1 HETATM 34 C C7 HUO . . . B 2 17.516 -20.803 -26.397 1 17.95 ? C7 HUO 401 A 1 HETATM 35 C C9 HUO . . . B 2 18.484 -22.378 -24.934 1 19 ? C9 HUO 401 A 1 HETATM 36 N N2 HUO . . . B 2 18.208 -18.511 -28.234 1 16.03 ? N2 HUO 401 A 1 HETATM 37 N N4 HUO . . . B 2 20.106 -19.893 -30.996 1 26.07 ? N4 HUO 401 A 1 HETATM 38 N N5 HUO . . . B 2 19.373 -15.952 -22.751 1 21.41 ? N5 HUO 401 A 1 HETATM 39 O O1 HUO . . . B 2 18.293 -17.555 -24.879 1 20.6 ? O1 HUO 401 A 1 HETATM 40 O O2 HUO . . . B 2 20.316 -18.805 -27.442 1 19.87 ? O2 HUO 401 A 1 HETATM 41 O O3 HUO . . . B 2 17.523 -21.107 -30.64 1 18.04 ? O3 HUO 401 A 1 HETATM 42 O O4 HUO . . . B 2 15.277 -21.195 -25.528 1 17.7 ? O4 HUO 401 A 1 HETATM 43 O O5 HUO . . . B 2 18.941 -14.11 -21.428 1 25.34 ? O5 HUO 401 A 1 HETATM 44 O O6 HUO . . . B 2 20.894 -14.343 -22.517 1 25.91 ? O6 HUO 401 A 1 HETATM 45 S S1 HUO . . . B 2 18.927 -17.821 -31.415 1 34.24 ? S1 HUO 401 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 45 #