data_7E1R
#
_model_server_result.job_id            cJ_IItRzmkQnUloZK8rB8Q 
_model_server_result.datetime_utc      '2024-11-23 16:49:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7e1r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1001}' 
#
_entry.id    7E1R 
#
_exptl.entry_id    7E1R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.52 
_cell.angle_gamma         90 
_cell.entry_id            7E1R 
_cell.length_a            51.793 
_cell.length_b            104.443 
_cell.length_c            99.576 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7E1R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,D,H,I,J,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B OG SER 44 B SER 36 1_555 G P PN7 . B PN7 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.641 ? 
covale ? covale2 D OG SER 44 D SER 36 1_555 J P PN7 . D PN7 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.632 ? 
metalc ? metalc1 A SG CYS 309 A CYS 300 1_555 F FE1 SF4 . A SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? 
metalc ? metalc2 A SG CYS 313 A CYS 304 1_555 F FE4 SF4 . A SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? 
metalc ? metalc3 A SG CYS 317 A CYS 308 1_555 F FE2 SF4 . A SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? 
metalc ? metalc4 A SG CYS 329 A CYS 320 1_555 F FE3 SF4 . A SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? 
metalc ? metalc5 C SG CYS 313 C CYS 304 1_555 I FE4 SF4 . C SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? 
metalc ? metalc6 C SG CYS 317 C CYS 308 1_555 I FE2 SF4 . C SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? 
metalc ? metalc7 C SG CYS 329 C CYS 320 1_555 I FE3 SF4 . C SF4 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     7E1R 
_atom_sites.fract_transf_matrix[1][1]    0.019308 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003238 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009575 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010183 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 FMN A 1 1001 1001 FMN FMN . 
F 4 SF4 A 1 1002 2001 SF4 SF4 . 
G 5 PN7 B 1 101 36 PN7 PSR . 
H 3 FMN C 1 1001 1001 FMN FMN . 
I 4 SF4 C 1 1002 2001 SF4 SF4 . 
J 5 PN7 D 1 101 36 PN7 PSR . 
K 6 HOH A 1 1101 18 HOH HOH . 
K 6 HOH A 2 1102 28 HOH HOH . 
K 6 HOH A 3 1103 4 HOH HOH . 
K 6 HOH A 4 1104 11 HOH HOH . 
K 6 HOH A 5 1105 9 HOH HOH . 
K 6 HOH A 6 1106 6 HOH HOH . 
K 6 HOH A 7 1107 17 HOH HOH . 
K 6 HOH A 8 1108 38 HOH HOH . 
K 6 HOH A 9 1109 33 HOH HOH . 
K 6 HOH A 10 1110 39 HOH HOH . 
K 6 HOH A 11 1111 30 HOH HOH . 
K 6 HOH A 12 1112 8 HOH HOH . 
K 6 HOH A 13 1113 29 HOH HOH . 
K 6 HOH A 14 1114 15 HOH HOH . 
K 6 HOH A 15 1115 42 HOH HOH . 
K 6 HOH A 16 1116 27 HOH HOH . 
K 6 HOH A 17 1117 34 HOH HOH . 
K 6 HOH A 18 1118 37 HOH HOH . 
K 6 HOH A 19 1119 16 HOH HOH . 
K 6 HOH A 20 1120 14 HOH HOH . 
K 6 HOH A 21 1121 43 HOH HOH . 
K 6 HOH A 22 1122 41 HOH HOH . 
K 6 HOH A 23 1123 40 HOH HOH . 
L 6 HOH B 1 201 7 HOH HOH . 
M 6 HOH C 1 1101 32 HOH HOH . 
M 6 HOH C 2 1102 19 HOH HOH . 
M 6 HOH C 3 1103 10 HOH HOH . 
M 6 HOH C 4 1104 26 HOH HOH . 
M 6 HOH C 5 1105 3 HOH HOH . 
M 6 HOH C 6 1106 20 HOH HOH . 
M 6 HOH C 7 1107 25 HOH HOH . 
M 6 HOH C 8 1108 1 HOH HOH . 
M 6 HOH C 9 1109 44 HOH HOH . 
M 6 HOH C 10 1110 5 HOH HOH . 
M 6 HOH C 11 1111 31 HOH HOH . 
M 6 HOH C 12 1112 2 HOH HOH . 
M 6 HOH C 13 1113 45 HOH HOH . 
M 6 HOH C 14 1114 13 HOH HOH . 
M 6 HOH C 15 1115 21 HOH HOH . 
M 6 HOH C 16 1116 35 HOH HOH . 
M 6 HOH C 17 1117 24 HOH HOH . 
M 6 HOH C 18 1118 12 HOH HOH . 
M 6 HOH C 19 1119 46 HOH HOH . 
M 6 HOH C 20 1120 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . H 3 10.522 3.599 48.204 1 30.4 ? N1 FMN 1001 C 1 
HETATM 2 C C2 FMN . . . H 3 11.479 4.25 47.421 1 29.13 ? C2 FMN 1001 C 1 
HETATM 3 O O2 FMN . . . H 3 11.409 4.2 46.198 1 35.02 ? O2 FMN 1001 C 1 
HETATM 4 N N3 FMN . . . H 3 12.516 4.965 48.022 1 29.59 ? N3 FMN 1001 C 1 
HETATM 5 C C4 FMN . . . H 3 12.601 5.02 49.418 1 29.49 ? C4 FMN 1001 C 1 
HETATM 6 O O4 FMN . . . H 3 13.519 5.657 49.934 1 29.09 ? O4 FMN 1001 C 1 
HETATM 7 C C4A FMN . . . H 3 11.637 4.384 50.2 1 28.78 ? C4A FMN 1001 C 1 
HETATM 8 N N5 FMN . . . H 3 11.707 4.45 51.539 1 29.23 ? N5 FMN 1001 C 1 
HETATM 9 C C5A FMN . . . H 3 10.895 3.687 52.29 1 32.46 ? C5A FMN 1001 C 1 
HETATM 10 C C6 FMN . . . H 3 11.074 3.612 53.672 1 32.69 ? C6 FMN 1001 C 1 
HETATM 11 C C7 FMN . . . H 3 10.249 2.814 54.469 1 35.38 ? C7 FMN 1001 C 1 
HETATM 12 C C7M FMN . . . H 3 10.459 2.759 55.855 1 26.03 ? C7M FMN 1001 C 1 
HETATM 13 C C8 FMN . . . H 3 9.225 2.081 53.861 1 34.34 ? C8 FMN 1001 C 1 
HETATM 14 C C8M FMN . . . H 3 8.371 1.269 54.602 1 31.66 ? C8M FMN 1001 C 1 
HETATM 15 C C9 FMN . . . H 3 9.053 2.156 52.486 1 34 ? C9 FMN 1001 C 1 
HETATM 16 C C9A FMN . . . H 3 9.869 2.961 51.69 1 35.05 ? C9A FMN 1001 C 1 
HETATM 17 N N10 FMN . . . H 3 9.703 3.009 50.354 1 31.57 ? N10 FMN 1001 C 1 
HETATM 18 C C10 FMN . . . H 3 10.593 3.677 49.601 1 29.38 ? C10 FMN 1001 C 1 
HETATM 19 C C1' FMN . . . H 3 8.715 2.119 49.678 1 32.17 ? C1' FMN 1001 C 1 
HETATM 20 C C2' FMN . . . H 3 9.264 0.662 49.591 1 25.62 ? C2' FMN 1001 C 1 
HETATM 21 O O2' FMN . . . H 3 10.457 0.635 48.813 1 25.27 ? O2' FMN 1001 C 1 
HETATM 22 C C3' FMN . . . H 3 8.235 -0.344 49.035 1 29.83 ? C3' FMN 1001 C 1 
HETATM 23 O O3' FMN . . . H 3 7.97 -0.056 47.663 1 33.69 ? O3' FMN 1001 C 1 
HETATM 24 C C4' FMN . . . H 3 6.889 -0.346 49.795 1 33.46 ? C4' FMN 1001 C 1 
HETATM 25 O O4' FMN . . . H 3 7.083 0.031 51.159 1 42.04 ? O4' FMN 1001 C 1 
HETATM 26 C C5' FMN . . . H 3 6.292 -1.754 49.728 1 28.97 ? C5' FMN 1001 C 1 
HETATM 27 O O5' FMN . . . H 3 5.154 -1.881 50.585 1 36.14 ? O5' FMN 1001 C 1 
HETATM 28 P P FMN . . . H 3 5.333 -2.741 51.94 1 33.02 ? P FMN 1001 C 1 
HETATM 29 O O1P FMN . . . H 3 5.865 -4.028 51.424 1 36.66 ? O1P FMN 1001 C 1 
HETATM 30 O O2P FMN . . . H 3 6.28 -1.993 52.773 1 25.11 ? O2P FMN 1001 C 1 
HETATM 31 O O3P FMN . . . H 3 3.956 -2.827 52.434 1 41.91 ? O3P FMN 1001 C 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    47 
_model_server_stats.query_time_ms           961 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           31 
#