data_7E5B # _model_server_result.job_id 7ausmBXYsS-AOzY8al8ZUw _model_server_result.datetime_utc '2024-10-10 08:21:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e5b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 7E5B # _exptl.entry_id 7E5B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7E5B _cell.length_a 79.481 _cell.length_b 79.481 _cell.length_c 279.197 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E5B _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,G,J 1 1 B,C,F,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7E5B _atom_sites.fract_transf_matrix[1][1] 0.012582 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003582 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 301 301 GOL GOL . F 3 GOL C 1 301 301 GOL GOL . G 4 HOH A 1 401 59 HOH HOH . G 4 HOH A 2 402 148 HOH HOH . G 4 HOH A 3 403 23 HOH HOH . G 4 HOH A 4 404 99 HOH HOH . G 4 HOH A 5 405 127 HOH HOH . G 4 HOH A 6 406 43 HOH HOH . G 4 HOH A 7 407 87 HOH HOH . G 4 HOH A 8 408 108 HOH HOH . G 4 HOH A 9 409 131 HOH HOH . G 4 HOH A 10 410 15 HOH HOH . G 4 HOH A 11 411 42 HOH HOH . G 4 HOH A 12 412 2 HOH HOH . G 4 HOH A 13 413 149 HOH HOH . G 4 HOH A 14 414 100 HOH HOH . G 4 HOH A 15 415 83 HOH HOH . G 4 HOH A 16 416 35 HOH HOH . G 4 HOH A 17 417 82 HOH HOH . G 4 HOH A 18 418 47 HOH HOH . G 4 HOH A 19 419 11 HOH HOH . G 4 HOH A 20 420 48 HOH HOH . G 4 HOH A 21 421 7 HOH HOH . G 4 HOH A 22 422 73 HOH HOH . G 4 HOH A 23 423 63 HOH HOH . G 4 HOH A 24 424 109 HOH HOH . G 4 HOH A 25 425 126 HOH HOH . G 4 HOH A 26 426 64 HOH HOH . G 4 HOH A 27 427 122 HOH HOH . G 4 HOH A 28 428 72 HOH HOH . G 4 HOH A 29 429 129 HOH HOH . G 4 HOH A 30 430 85 HOH HOH . G 4 HOH A 31 431 65 HOH HOH . G 4 HOH A 32 432 128 HOH HOH . G 4 HOH A 33 433 118 HOH HOH . G 4 HOH A 34 434 147 HOH HOH . G 4 HOH A 35 435 78 HOH HOH . G 4 HOH A 36 436 54 HOH HOH . G 4 HOH A 37 437 132 HOH HOH . G 4 HOH A 38 438 138 HOH HOH . H 4 HOH B 1 301 140 HOH HOH . H 4 HOH B 2 302 71 HOH HOH . H 4 HOH B 3 303 46 HOH HOH . H 4 HOH B 4 304 50 HOH HOH . H 4 HOH B 5 305 37 HOH HOH . H 4 HOH B 6 306 61 HOH HOH . H 4 HOH B 7 307 103 HOH HOH . H 4 HOH B 8 308 44 HOH HOH . H 4 HOH B 9 309 36 HOH HOH . H 4 HOH B 10 310 21 HOH HOH . H 4 HOH B 11 311 67 HOH HOH . H 4 HOH B 12 312 81 HOH HOH . H 4 HOH B 13 313 33 HOH HOH . H 4 HOH B 14 314 105 HOH HOH . H 4 HOH B 15 315 8 HOH HOH . H 4 HOH B 16 316 6 HOH HOH . H 4 HOH B 17 317 19 HOH HOH . H 4 HOH B 18 318 125 HOH HOH . H 4 HOH B 19 319 9 HOH HOH . H 4 HOH B 20 320 74 HOH HOH . H 4 HOH B 21 321 32 HOH HOH . H 4 HOH B 22 322 115 HOH HOH . H 4 HOH B 23 323 38 HOH HOH . H 4 HOH B 24 324 27 HOH HOH . H 4 HOH B 25 325 53 HOH HOH . H 4 HOH B 26 326 22 HOH HOH . H 4 HOH B 27 327 51 HOH HOH . H 4 HOH B 28 328 39 HOH HOH . H 4 HOH B 29 329 20 HOH HOH . H 4 HOH B 30 330 31 HOH HOH . H 4 HOH B 31 331 4 HOH HOH . H 4 HOH B 32 332 1 HOH HOH . H 4 HOH B 33 333 10 HOH HOH . H 4 HOH B 34 334 28 HOH HOH . H 4 HOH B 35 335 98 HOH HOH . H 4 HOH B 36 336 104 HOH HOH . H 4 HOH B 37 337 3 HOH HOH . H 4 HOH B 38 338 80 HOH HOH . H 4 HOH B 39 339 66 HOH HOH . H 4 HOH B 40 340 12 HOH HOH . H 4 HOH B 41 341 84 HOH HOH . H 4 HOH B 42 342 112 HOH HOH . H 4 HOH B 43 343 145 HOH HOH . H 4 HOH B 44 344 5 HOH HOH . H 4 HOH B 45 345 113 HOH HOH . H 4 HOH B 46 346 106 HOH HOH . H 4 HOH B 47 347 30 HOH HOH . H 4 HOH B 48 348 24 HOH HOH . H 4 HOH B 49 349 40 HOH HOH . H 4 HOH B 50 350 139 HOH HOH . H 4 HOH B 51 351 116 HOH HOH . H 4 HOH B 52 352 13 HOH HOH . H 4 HOH B 53 353 144 HOH HOH . H 4 HOH B 54 354 25 HOH HOH . H 4 HOH B 55 355 114 HOH HOH . H 4 HOH B 56 356 130 HOH HOH . H 4 HOH B 57 357 110 HOH HOH . H 4 HOH B 58 358 151 HOH HOH . H 4 HOH B 59 359 77 HOH HOH . H 4 HOH B 60 360 34 HOH HOH . H 4 HOH B 61 361 134 HOH HOH . H 4 HOH B 62 362 101 HOH HOH . H 4 HOH B 63 363 94 HOH HOH . H 4 HOH B 64 364 68 HOH HOH . H 4 HOH B 65 365 79 HOH HOH . H 4 HOH B 66 366 137 HOH HOH . H 4 HOH B 67 367 120 HOH HOH . H 4 HOH B 68 368 146 HOH HOH . H 4 HOH B 69 369 153 HOH HOH . H 4 HOH B 70 370 135 HOH HOH . H 4 HOH B 71 371 102 HOH HOH . H 4 HOH B 72 372 96 HOH HOH . H 4 HOH B 73 373 133 HOH HOH . H 4 HOH B 74 374 124 HOH HOH . H 4 HOH B 75 375 154 HOH HOH . H 4 HOH B 76 376 152 HOH HOH . H 4 HOH B 77 377 150 HOH HOH . H 4 HOH B 78 378 56 HOH HOH . H 4 HOH B 79 379 62 HOH HOH . I 4 HOH C 1 401 57 HOH HOH . I 4 HOH C 2 402 49 HOH HOH . I 4 HOH C 3 403 55 HOH HOH . I 4 HOH C 4 404 117 HOH HOH . I 4 HOH C 5 405 70 HOH HOH . I 4 HOH C 6 406 89 HOH HOH . I 4 HOH C 7 407 60 HOH HOH . I 4 HOH C 8 408 111 HOH HOH . I 4 HOH C 9 409 29 HOH HOH . I 4 HOH C 10 410 14 HOH HOH . I 4 HOH C 11 411 76 HOH HOH . I 4 HOH C 12 412 18 HOH HOH . I 4 HOH C 13 413 143 HOH HOH . I 4 HOH C 14 414 136 HOH HOH . I 4 HOH C 15 415 107 HOH HOH . I 4 HOH C 16 416 88 HOH HOH . I 4 HOH C 17 417 95 HOH HOH . I 4 HOH C 18 418 123 HOH HOH . I 4 HOH C 19 419 97 HOH HOH . I 4 HOH C 20 420 16 HOH HOH . I 4 HOH C 21 421 86 HOH HOH . I 4 HOH C 22 422 69 HOH HOH . I 4 HOH C 23 423 45 HOH HOH . I 4 HOH C 24 424 91 HOH HOH . I 4 HOH C 25 425 142 HOH HOH . I 4 HOH C 26 426 119 HOH HOH . I 4 HOH C 27 427 90 HOH HOH . I 4 HOH C 28 428 75 HOH HOH . I 4 HOH C 29 429 121 HOH HOH . J 4 HOH D 1 101 26 HOH HOH . J 4 HOH D 2 102 58 HOH HOH . J 4 HOH D 3 103 17 HOH HOH . J 4 HOH D 4 104 92 HOH HOH . J 4 HOH D 5 105 93 HOH HOH . J 4 HOH D 6 106 41 HOH HOH . J 4 HOH D 7 107 52 HOH HOH . J 4 HOH D 8 108 141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 22.263 -2.459 53.996 1 49.21 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . E 3 20.963 -2.048 54.426 1 48.47 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . E 3 23.065 -2.799 55.311 1 50.75 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . E 3 22.197 -2.79 56.419 1 55 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . E 3 24.152 -1.66 55.481 1 54.91 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . E 3 24.726 -1.323 54.237 1 51.29 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #