data_7E64 # _model_server_result.job_id 8YvPmIapYzh2gKG_B5MH5A _model_server_result.datetime_utc '2024-11-16 07:43:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e64 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7E64 # _exptl.entry_id 7E64 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 304.3 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]amino]ethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7E64 _cell.length_a 116.14 _cell.length_b 116.14 _cell.length_c 57.82 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E64 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 149 A HIS 168 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc2 A OD1 ASP 153 A ASP 172 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc3 A ND1 HIS 230 A HIS 249 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc4 B ZN ZN . A ZN 300 1_555 C O9 HWX . A HWX 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc5 B ZN ZN . A ZN 300 1_555 C N4 HWX . A HWX 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? # _chem_comp.formula 'C11 H20 N4 O6' _chem_comp.formula_weight 304.3 _chem_comp.id HWX _chem_comp.mon_nstd_flag . _chem_comp.name '2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]amino]ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O9 N4 HWX sing 137 n n N4 C12 HWX sing 138 n n O8 C12 HWX doub 139 n n C12 C5 HWX sing 140 n n C5 C11 HWX sing 141 n n C5 N2 HWX sing 142 n n N2 C4 HWX sing 143 n n C4 O3 HWX doub 144 n n C4 C2 HWX sing 145 n n C1 C2 HWX sing 146 n n C1 C6 HWX sing 147 n n C2 N1 HWX sing 148 n n C6 N3 HWX sing 149 n n N1 C3 HWX sing 150 n n N3 C7 HWX sing 151 n n C3 O1 HWX doub 152 n n C3 C13 HWX sing 153 n n C7 C8 HWX sing 154 n n O4 C8 HWX doub 155 n n C8 O2 HWX sing 156 n n C5 H1 HWX sing 157 n n C6 H2 HWX sing 158 n n C6 H3 HWX sing 159 n n C11 H4 HWX sing 160 n n C11 H5 HWX sing 161 n n C11 H6 HWX sing 162 n n C7 H7 HWX sing 163 n n C7 H8 HWX sing 164 n n C13 H9 HWX sing 165 n n C13 H10 HWX sing 166 n n C13 H11 HWX sing 167 n n N1 H12 HWX sing 168 n n N2 H13 HWX sing 169 n n N3 H14 HWX sing 170 n n C1 H16 HWX sing 171 n n C1 H17 HWX sing 172 n n C2 H18 HWX sing 173 n n O2 H19 HWX sing 174 n n N4 H21 HWX sing 175 n n O9 H20 HWX sing 176 n n # _atom_sites.entry_id 7E64 _atom_sites.fract_transf_matrix[1][1] 0.00861 _atom_sites.fract_transf_matrix[1][2] 0.004971 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009942 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 300 300 ZN ZN . C 3 HWX A 1 301 301 HWX DRG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 HWX . . . C 3 -36.209 -33.3 -0.6 0.8 72.02 ? C4 HWX 301 A 1 HETATM 2 C C5 HWX . . . C 3 -37.162 -33.315 -2.912 0.8 71.25 ? C5 HWX 301 A 1 HETATM 3 C C6 HWX . . . C 3 -33.055 -34.483 1.283 0.8 71.74 ? C6 HWX 301 A 1 HETATM 4 C C11 HWX . . . C 3 -37.56 -34.791 -2.831 0.8 70.83 ? C11 HWX 301 A 1 HETATM 5 C C7 HWX . . . C 3 -33.032 -35.769 3.338 0.8 71.38 ? C7 HWX 301 A 1 HETATM 6 C C8 HWX . . . C 3 -34.126 -36.165 4.331 0.8 71.12 ? C8 HWX 301 A 1 HETATM 7 C C12 HWX . . . C 3 -36.884 -32.911 -4.367 0.8 71.35 ? C12 HWX 301 A 1 HETATM 8 C C13 HWX . . . C 3 -36.182 -33.277 4.206 0.8 72.68 ? C13 HWX 301 A 1 HETATM 9 N N1 HWX . . . C 3 -35.694 -33.57 1.703 0.8 72.47 ? N1 HWX 301 A 1 HETATM 10 N N2 HWX . . . C 3 -36.002 -33.172 -2.039 0.8 71.63 ? N2 HWX 301 A 1 HETATM 11 C C3 HWX . . . C 3 -35.491 -32.81 2.926 0.8 72.8 ? C3 HWX 301 A 1 HETATM 12 N N3 HWX . . . C 3 -33.597 -35.631 2 0.8 71.6 ? N3 HWX 301 A 1 HETATM 13 C C1 HWX . . . C 3 -33.943 -34.151 0.078 0.8 71.83 ? C1 HWX 301 A 1 HETATM 14 O O1 HWX . . . C 3 -34.799 -31.846 2.944 0.8 73.28 ? O1 HWX 301 A 1 HETATM 15 C C2 HWX . . . C 3 -35.086 -33.197 0.434 0.8 72.08 ? C2 HWX 301 A 1 HETATM 16 O O3 HWX . . . C 3 -37.307 -33.499 -0.195 0.8 72.15 ? O3 HWX 301 A 1 HETATM 17 N N4 HWX . . . C 3 -37.852 -33.239 -5.409 0.8 70.83 ? N4 HWX 301 A 1 HETATM 18 O O8 HWX . . . C 3 -35.89 -32.322 -4.643 0.8 71.82 ? O8 HWX 301 A 1 HETATM 19 O O9 HWX . . . C 3 -37.662 -32.939 -6.531 0.8 70.38 ? O9 HWX 301 A 1 HETATM 20 O O2 HWX . . . C 3 -33.836 -36.353 5.541 0.8 70.27 ? O2 HWX 301 A 1 HETATM 21 O O4 HWX . . . C 3 -35.32 -36.301 3.952 0.8 71.33 ? O4 HWX 301 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #