data_7E6E # _model_server_result.job_id VHKlVLrPIAVlE-I5am2wWQ _model_server_result.datetime_utc '2024-11-28 01:51:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":509}' # _entry.id 7E6E # _exptl.entry_id 7E6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7E6E _cell.length_a 92.4 _cell.length_b 92.4 _cell.length_c 128.7 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -85.8 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7E6E _atom_sites.fract_transf_matrix[1][1] 0.010823 _atom_sites.fract_transf_matrix[1][2] 0.006248 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012497 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00777 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PMP A 1 501 1 PMP PMP . C 3 PG4 A 1 502 1 PG4 PG4 . D 4 PEG A 1 503 1 PEG PEG . E 4 PEG A 1 504 2 PEG PEG . F 4 PEG A 1 505 3 PEG PEG . G 4 PEG A 1 506 4 PEG PEG . H 5 EDO A 1 507 1 EDO EDO . I 5 EDO A 1 508 2 EDO EDO . J 5 EDO A 1 509 3 EDO EDO . K 5 EDO A 1 510 4 EDO EDO . L 5 EDO A 1 511 5 EDO EDO . M 5 EDO A 1 512 6 EDO EDO . N 6 HOH A 1 601 69 HOH HOH . N 6 HOH A 2 602 95 HOH HOH . N 6 HOH A 3 603 81 HOH HOH . N 6 HOH A 4 604 76 HOH HOH . N 6 HOH A 5 605 53 HOH HOH . N 6 HOH A 6 606 22 HOH HOH . N 6 HOH A 7 607 86 HOH HOH . N 6 HOH A 8 608 16 HOH HOH . N 6 HOH A 9 609 85 HOH HOH . N 6 HOH A 10 610 40 HOH HOH . N 6 HOH A 11 611 87 HOH HOH . N 6 HOH A 12 612 24 HOH HOH . N 6 HOH A 13 613 45 HOH HOH . N 6 HOH A 14 614 88 HOH HOH . N 6 HOH A 15 615 42 HOH HOH . N 6 HOH A 16 616 78 HOH HOH . N 6 HOH A 17 617 84 HOH HOH . N 6 HOH A 18 618 50 HOH HOH . N 6 HOH A 19 619 30 HOH HOH . N 6 HOH A 20 620 31 HOH HOH . N 6 HOH A 21 621 20 HOH HOH . N 6 HOH A 22 622 93 HOH HOH . N 6 HOH A 23 623 51 HOH HOH . N 6 HOH A 24 624 11 HOH HOH . N 6 HOH A 25 625 9 HOH HOH . N 6 HOH A 26 626 77 HOH HOH . N 6 HOH A 27 627 83 HOH HOH . N 6 HOH A 28 628 37 HOH HOH . N 6 HOH A 29 629 79 HOH HOH . N 6 HOH A 30 630 80 HOH HOH . N 6 HOH A 31 631 23 HOH HOH . N 6 HOH A 32 632 25 HOH HOH . N 6 HOH A 33 633 65 HOH HOH . N 6 HOH A 34 634 33 HOH HOH . N 6 HOH A 35 635 59 HOH HOH . N 6 HOH A 36 636 60 HOH HOH . N 6 HOH A 37 637 12 HOH HOH . N 6 HOH A 38 638 41 HOH HOH . N 6 HOH A 39 639 49 HOH HOH . N 6 HOH A 40 640 19 HOH HOH . N 6 HOH A 41 641 58 HOH HOH . N 6 HOH A 42 642 38 HOH HOH . N 6 HOH A 43 643 8 HOH HOH . N 6 HOH A 44 644 56 HOH HOH . N 6 HOH A 45 645 44 HOH HOH . N 6 HOH A 46 646 28 HOH HOH . N 6 HOH A 47 647 73 HOH HOH . N 6 HOH A 48 648 21 HOH HOH . N 6 HOH A 49 649 3 HOH HOH . N 6 HOH A 50 650 39 HOH HOH . N 6 HOH A 51 651 17 HOH HOH . N 6 HOH A 52 652 35 HOH HOH . N 6 HOH A 53 653 64 HOH HOH . N 6 HOH A 54 654 71 HOH HOH . N 6 HOH A 55 655 62 HOH HOH . N 6 HOH A 56 656 61 HOH HOH . N 6 HOH A 57 657 5 HOH HOH . N 6 HOH A 58 658 27 HOH HOH . N 6 HOH A 59 659 82 HOH HOH . N 6 HOH A 60 660 68 HOH HOH . N 6 HOH A 61 661 2 HOH HOH . N 6 HOH A 62 662 74 HOH HOH . N 6 HOH A 63 663 91 HOH HOH . N 6 HOH A 64 664 47 HOH HOH . N 6 HOH A 65 665 75 HOH HOH . N 6 HOH A 66 666 52 HOH HOH . N 6 HOH A 67 667 54 HOH HOH . N 6 HOH A 68 668 34 HOH HOH . N 6 HOH A 69 669 46 HOH HOH . N 6 HOH A 70 670 26 HOH HOH . N 6 HOH A 71 671 63 HOH HOH . N 6 HOH A 72 672 92 HOH HOH . N 6 HOH A 73 673 1 HOH HOH . N 6 HOH A 74 674 32 HOH HOH . N 6 HOH A 75 675 67 HOH HOH . N 6 HOH A 76 676 55 HOH HOH . N 6 HOH A 77 677 7 HOH HOH . N 6 HOH A 78 678 72 HOH HOH . N 6 HOH A 79 679 43 HOH HOH . N 6 HOH A 80 680 90 HOH HOH . N 6 HOH A 81 681 4 HOH HOH . N 6 HOH A 82 682 36 HOH HOH . N 6 HOH A 83 683 66 HOH HOH . N 6 HOH A 84 684 14 HOH HOH . N 6 HOH A 85 685 48 HOH HOH . N 6 HOH A 86 686 18 HOH HOH . N 6 HOH A 87 687 13 HOH HOH . N 6 HOH A 88 688 10 HOH HOH . N 6 HOH A 89 689 70 HOH HOH . N 6 HOH A 90 690 15 HOH HOH . N 6 HOH A 91 691 6 HOH HOH . N 6 HOH A 92 692 29 HOH HOH . N 6 HOH A 93 693 57 HOH HOH . N 6 HOH A 94 694 94 HOH HOH . N 6 HOH A 95 695 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 5 53.515 -52.932 -38.96 1 64.82 ? C1 EDO 509 A 1 HETATM 2 O O1 EDO . . . J 5 53.495 -52.285 -37.692 1 72.19 ? O1 EDO 509 A 1 HETATM 3 C C2 EDO . . . J 5 53.47 -54.421 -38.882 1 74.44 ? C2 EDO 509 A 1 HETATM 4 O O2 EDO . . . J 5 53.812 -55.002 -40.137 1 71.76 ? O2 EDO 509 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #