data_7E6P # _model_server_result.job_id mXY5GrCDyMys0ZVB22QYlA _model_server_result.datetime_utc '2024-10-19 14:41:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e6p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 7E6P # _exptl.entry_id 7E6P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.219 _cell.angle_gamma 90 _cell.entry_id 7E6P _cell.length_a 185.049 _cell.length_b 40.464 _cell.length_c 69.379 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E6P _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 94 L CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 A SG CYS 140 L CYS 140 1_555 A SG CYS 200 L CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 B SG CYS 146 H CYS 146 1_555 B SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf5 C SG CYS 3 A CYS 17 1_555 C SG CYS 14 A CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 7E6P _atom_sites.fract_transf_matrix[1][1] 0.005404 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000685 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024713 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014529 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO L 1 301 804 EDO EDO . E 4 EDO L 1 302 806 EDO EDO . F 5 PEG L 1 303 201 PEG PEG . G 5 PEG L 1 304 202 PEG PEG . H 4 EDO H 1 301 802 EDO EDO . I 6 HOH L 1 401 31 HOH HOH . I 6 HOH L 2 402 62 HOH HOH . I 6 HOH L 3 403 158 HOH HOH . I 6 HOH L 4 404 57 HOH HOH . I 6 HOH L 5 405 122 HOH HOH . I 6 HOH L 6 406 61 HOH HOH . I 6 HOH L 7 407 32 HOH HOH . I 6 HOH L 8 408 139 HOH HOH . I 6 HOH L 9 409 413 HOH HOH . I 6 HOH L 10 410 31 HOH HOH . I 6 HOH L 11 411 72 HOH HOH . I 6 HOH L 12 412 12 HOH HOH . I 6 HOH L 13 413 3 HOH HOH . I 6 HOH L 14 414 50 HOH HOH . I 6 HOH L 15 415 70 HOH HOH . I 6 HOH L 16 416 19 HOH HOH . I 6 HOH L 17 417 96 HOH HOH . I 6 HOH L 18 418 108 HOH HOH . I 6 HOH L 19 419 40 HOH HOH . I 6 HOH L 20 420 77 HOH HOH . I 6 HOH L 21 421 137 HOH HOH . I 6 HOH L 22 422 28 HOH HOH . I 6 HOH L 23 423 2 HOH HOH . I 6 HOH L 24 424 71 HOH HOH . I 6 HOH L 25 425 23 HOH HOH . I 6 HOH L 26 426 136 HOH HOH . I 6 HOH L 27 427 74 HOH HOH . I 6 HOH L 28 428 190 HOH HOH . I 6 HOH L 29 429 29 HOH HOH . I 6 HOH L 30 430 94 HOH HOH . I 6 HOH L 31 431 113 HOH HOH . I 6 HOH L 32 432 69 HOH HOH . I 6 HOH L 33 433 458 HOH HOH . I 6 HOH L 34 434 87 HOH HOH . I 6 HOH L 35 435 92 HOH HOH . I 6 HOH L 36 436 12 HOH HOH . I 6 HOH L 37 437 22 HOH HOH . I 6 HOH L 38 438 65 HOH HOH . I 6 HOH L 39 439 397 HOH HOH . I 6 HOH L 40 440 214 HOH HOH . I 6 HOH L 41 441 17 HOH HOH . I 6 HOH L 42 442 102 HOH HOH . I 6 HOH L 43 443 33 HOH HOH . I 6 HOH L 44 444 51 HOH HOH . I 6 HOH L 45 445 183 HOH HOH . J 6 HOH H 1 401 1 HOH HOH . J 6 HOH H 2 402 104 HOH HOH . J 6 HOH H 3 403 177 HOH HOH . J 6 HOH H 4 404 219 HOH HOH . J 6 HOH H 5 405 1 HOH HOH . J 6 HOH H 6 406 63 HOH HOH . J 6 HOH H 7 407 56 HOH HOH . J 6 HOH H 8 408 11 HOH HOH . J 6 HOH H 9 409 37 HOH HOH . J 6 HOH H 10 410 24 HOH HOH . J 6 HOH H 11 411 21 HOH HOH . J 6 HOH H 12 412 10 HOH HOH . J 6 HOH H 13 413 83 HOH HOH . J 6 HOH H 14 414 130 HOH HOH . J 6 HOH H 15 415 5 HOH HOH . J 6 HOH H 16 416 26 HOH HOH . J 6 HOH H 17 417 99 HOH HOH . J 6 HOH H 18 418 146 HOH HOH . J 6 HOH H 19 419 8 HOH HOH . J 6 HOH H 20 420 35 HOH HOH . J 6 HOH H 21 421 383 HOH HOH . J 6 HOH H 22 422 15 HOH HOH . J 6 HOH H 23 423 59 HOH HOH . J 6 HOH H 24 424 129 HOH HOH . J 6 HOH H 25 425 25 HOH HOH . J 6 HOH H 26 426 38 HOH HOH . J 6 HOH H 27 427 20 HOH HOH . J 6 HOH H 28 428 42 HOH HOH . J 6 HOH H 29 429 101 HOH HOH . J 6 HOH H 30 430 147 HOH HOH . J 6 HOH H 31 431 91 HOH HOH . J 6 HOH H 32 432 120 HOH HOH . J 6 HOH H 33 433 8 HOH HOH . J 6 HOH H 34 434 114 HOH HOH . J 6 HOH H 35 435 36 HOH HOH . J 6 HOH H 36 436 116 HOH HOH . J 6 HOH H 37 437 89 HOH HOH . J 6 HOH H 38 438 49 HOH HOH . J 6 HOH H 39 439 27 HOH HOH . J 6 HOH H 40 440 101 HOH HOH . J 6 HOH H 41 441 336 HOH HOH . J 6 HOH H 42 442 147 HOH HOH . J 6 HOH H 43 443 103 HOH HOH . K 6 HOH A 1 101 7 HOH HOH . K 6 HOH A 2 102 1 HOH HOH . K 6 HOH A 3 103 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 42.172 -37.299 -21.633 1 44.38 0 C1 EDO 301 L 1 HETATM 2 O O1 EDO . . . D 4 41.745 -36.544 -20.514 1 40.79 0 O1 EDO 301 L 1 HETATM 3 C C2 EDO . . . D 4 41.225 -37.27 -22.779 1 45.47 0 C2 EDO 301 L 1 HETATM 4 O O2 EDO . . . D 4 41.605 -36.387 -23.818 1 41.61 0 O2 EDO 301 L 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #