data_7E78 # _model_server_result.job_id 3EFl2uMsxkec70T6zHAoxg _model_server_result.datetime_utc '2025-02-28 02:29:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e78 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 7E78 # _exptl.entry_id 7E78 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-O-phosphono-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.119 _cell.angle_gamma 90 _cell.entry_id 7E78 _cell.length_a 243.616 _cell.length_b 74.449 _cell.length_c 125.585 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E78 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H 1 1 C,D,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id G6P _chem_comp.mon_nstd_flag n _chem_comp.name 6-O-phosphono-alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms ALPHA-D-GLUCOSE-6-PHOSPHATE;6-O-phosphono-alpha-D-glucose;6-O-phosphono-D-glucose;6-O-phosphono-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 G6P sing 83 n n C1 O1 G6P sing 84 n n C1 O5 G6P sing 85 n n C1 H1 G6P sing 86 n n C2 C3 G6P sing 87 n n C2 O2 G6P sing 88 n n C2 H2 G6P sing 89 n n C3 C4 G6P sing 90 n n C3 O3 G6P sing 91 n n C3 H3 G6P sing 92 n n C4 C5 G6P sing 93 n n C4 O4 G6P sing 94 n n C4 H4 G6P sing 95 n n C5 C6 G6P sing 96 n n C5 O5 G6P sing 97 n n C5 H5 G6P sing 98 n n C6 O6 G6P sing 99 n n C6 H61 G6P sing 100 n n C6 H62 G6P sing 101 n n O1 HO1 G6P sing 102 n n O2 HO2 G6P sing 103 n n O3 HO3 G6P sing 104 n n O4 HO4 G6P sing 105 n n O6 P G6P sing 106 n n P O1P G6P sing 107 n n P O2P G6P sing 108 n n P O3P G6P doub 109 n n O1P HO1P G6P sing 110 n n O2P HO2P G6P sing 111 n n # _pdbx_chem_comp_identifier.comp_id G6P _pdbx_chem_comp_identifier.identifier a-D-Glcp6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 7E78 _atom_sites.fract_transf_matrix[1][1] 0.004105 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000296 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013432 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007983 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 G6P A 1 601 2 G6P G6P . F 2 G6P C 1 601 1 G6P G6P . G 3 HOH A 1 701 307 HOH HOH . G 3 HOH A 2 702 26 HOH HOH . G 3 HOH A 3 703 101 HOH HOH . G 3 HOH A 4 704 7 HOH HOH . G 3 HOH A 5 705 170 HOH HOH . G 3 HOH A 6 706 46 HOH HOH . G 3 HOH A 7 707 59 HOH HOH . G 3 HOH A 8 708 22 HOH HOH . G 3 HOH A 9 709 293 HOH HOH . G 3 HOH A 10 710 23 HOH HOH . G 3 HOH A 11 711 95 HOH HOH . G 3 HOH A 12 712 96 HOH HOH . G 3 HOH A 13 713 9 HOH HOH . G 3 HOH A 14 714 403 HOH HOH . G 3 HOH A 15 715 128 HOH HOH . G 3 HOH A 16 716 299 HOH HOH . G 3 HOH A 17 717 216 HOH HOH . G 3 HOH A 18 718 204 HOH HOH . G 3 HOH A 19 719 6 HOH HOH . G 3 HOH A 20 720 32 HOH HOH . G 3 HOH A 21 721 310 HOH HOH . G 3 HOH A 22 722 19 HOH HOH . G 3 HOH A 23 723 201 HOH HOH . G 3 HOH A 24 724 188 HOH HOH . G 3 HOH A 25 725 405 HOH HOH . G 3 HOH A 26 726 84 HOH HOH . G 3 HOH A 27 727 157 HOH HOH . G 3 HOH A 28 728 430 HOH HOH . G 3 HOH A 29 729 225 HOH HOH . G 3 HOH A 30 730 120 HOH HOH . G 3 HOH A 31 731 20 HOH HOH . G 3 HOH A 32 732 241 HOH HOH . G 3 HOH A 33 733 52 HOH HOH . G 3 HOH A 34 734 10 HOH HOH . G 3 HOH A 35 735 27 HOH HOH . G 3 HOH A 36 736 122 HOH HOH . G 3 HOH A 37 737 360 HOH HOH . G 3 HOH A 38 738 142 HOH HOH . G 3 HOH A 39 739 189 HOH HOH . G 3 HOH A 40 740 56 HOH HOH . G 3 HOH A 41 741 268 HOH HOH . G 3 HOH A 42 742 166 HOH HOH . G 3 HOH A 43 743 18 HOH HOH . G 3 HOH A 44 744 147 HOH HOH . G 3 HOH A 45 745 85 HOH HOH . G 3 HOH A 46 746 233 HOH HOH . G 3 HOH A 47 747 297 HOH HOH . G 3 HOH A 48 748 429 HOH HOH . G 3 HOH A 49 749 294 HOH HOH . G 3 HOH A 50 750 393 HOH HOH . G 3 HOH A 51 751 230 HOH HOH . G 3 HOH A 52 752 135 HOH HOH . G 3 HOH A 53 753 396 HOH HOH . G 3 HOH A 54 754 352 HOH HOH . G 3 HOH A 55 755 392 HOH HOH . G 3 HOH A 56 756 331 HOH HOH . G 3 HOH A 57 757 349 HOH HOH . G 3 HOH A 58 758 432 HOH HOH . H 3 HOH C 1 701 343 HOH HOH . H 3 HOH C 2 702 12 HOH HOH . H 3 HOH C 3 703 329 HOH HOH . H 3 HOH C 4 704 90 HOH HOH . H 3 HOH C 5 705 162 HOH HOH . H 3 HOH C 6 706 2 HOH HOH . H 3 HOH C 7 707 104 HOH HOH . H 3 HOH C 8 708 72 HOH HOH . H 3 HOH C 9 709 4 HOH HOH . H 3 HOH C 10 710 97 HOH HOH . H 3 HOH C 11 711 141 HOH HOH . H 3 HOH C 12 712 54 HOH HOH . H 3 HOH C 13 713 417 HOH HOH . H 3 HOH C 14 714 113 HOH HOH . H 3 HOH C 15 715 426 HOH HOH . H 3 HOH C 16 716 21 HOH HOH . H 3 HOH C 17 717 273 HOH HOH . H 3 HOH C 18 718 58 HOH HOH . H 3 HOH C 19 719 14 HOH HOH . H 3 HOH C 20 720 69 HOH HOH . H 3 HOH C 21 721 317 HOH HOH . H 3 HOH C 22 722 99 HOH HOH . H 3 HOH C 23 723 125 HOH HOH . H 3 HOH C 24 724 151 HOH HOH . H 3 HOH C 25 725 270 HOH HOH . H 3 HOH C 26 726 15 HOH HOH . H 3 HOH C 27 727 42 HOH HOH . H 3 HOH C 28 728 178 HOH HOH . H 3 HOH C 29 729 351 HOH HOH . H 3 HOH C 30 730 146 HOH HOH . H 3 HOH C 31 731 249 HOH HOH . H 3 HOH C 32 732 105 HOH HOH . H 3 HOH C 33 733 91 HOH HOH . H 3 HOH C 34 734 286 HOH HOH . H 3 HOH C 35 735 318 HOH HOH . H 3 HOH C 36 736 208 HOH HOH . H 3 HOH C 37 737 186 HOH HOH . H 3 HOH C 38 738 340 HOH HOH . H 3 HOH C 39 739 244 HOH HOH . H 3 HOH C 40 740 407 HOH HOH . H 3 HOH C 41 741 102 HOH HOH . H 3 HOH C 42 742 287 HOH HOH . H 3 HOH C 43 743 300 HOH HOH . H 3 HOH C 44 744 44 HOH HOH . H 3 HOH C 45 745 435 HOH HOH . H 3 HOH C 46 746 156 HOH HOH . H 3 HOH C 47 747 290 HOH HOH . H 3 HOH C 48 748 431 HOH HOH . H 3 HOH C 49 749 408 HOH HOH . H 3 HOH C 50 750 271 HOH HOH . H 3 HOH C 51 751 134 HOH HOH . H 3 HOH C 52 752 265 HOH HOH . H 3 HOH C 53 753 311 HOH HOH . H 3 HOH C 54 754 433 HOH HOH . H 3 HOH C 55 755 285 HOH HOH . H 3 HOH C 56 756 382 HOH HOH . I 3 HOH B 1 601 144 HOH HOH . I 3 HOH B 2 602 259 HOH HOH . I 3 HOH B 3 603 24 HOH HOH . I 3 HOH B 4 604 176 HOH HOH . I 3 HOH B 5 605 361 HOH HOH . I 3 HOH B 6 606 226 HOH HOH . I 3 HOH B 7 607 30 HOH HOH . I 3 HOH B 8 608 25 HOH HOH . I 3 HOH B 9 609 51 HOH HOH . I 3 HOH B 10 610 312 HOH HOH . I 3 HOH B 11 611 38 HOH HOH . I 3 HOH B 12 612 36 HOH HOH . I 3 HOH B 13 613 117 HOH HOH . I 3 HOH B 14 614 111 HOH HOH . I 3 HOH B 15 615 139 HOH HOH . I 3 HOH B 16 616 127 HOH HOH . I 3 HOH B 17 617 274 HOH HOH . I 3 HOH B 18 618 137 HOH HOH . I 3 HOH B 19 619 153 HOH HOH . I 3 HOH B 20 620 138 HOH HOH . I 3 HOH B 21 621 37 HOH HOH . I 3 HOH B 22 622 31 HOH HOH . I 3 HOH B 23 623 220 HOH HOH . I 3 HOH B 24 624 289 HOH HOH . I 3 HOH B 25 625 57 HOH HOH . I 3 HOH B 26 626 49 HOH HOH . I 3 HOH B 27 627 368 HOH HOH . I 3 HOH B 28 628 251 HOH HOH . I 3 HOH B 29 629 219 HOH HOH . I 3 HOH B 30 630 185 HOH HOH . I 3 HOH B 31 631 187 HOH HOH . I 3 HOH B 32 632 87 HOH HOH . I 3 HOH B 33 633 298 HOH HOH . I 3 HOH B 34 634 89 HOH HOH . I 3 HOH B 35 635 345 HOH HOH . I 3 HOH B 36 636 88 HOH HOH . I 3 HOH B 37 637 179 HOH HOH . I 3 HOH B 38 638 45 HOH HOH . I 3 HOH B 39 639 325 HOH HOH . I 3 HOH B 40 640 124 HOH HOH . I 3 HOH B 41 641 276 HOH HOH . I 3 HOH B 42 642 114 HOH HOH . I 3 HOH B 43 643 206 HOH HOH . I 3 HOH B 44 644 133 HOH HOH . I 3 HOH B 45 645 414 HOH HOH . I 3 HOH B 46 646 130 HOH HOH . I 3 HOH B 47 647 112 HOH HOH . I 3 HOH B 48 648 191 HOH HOH . I 3 HOH B 49 649 43 HOH HOH . I 3 HOH B 50 650 328 HOH HOH . I 3 HOH B 51 651 386 HOH HOH . I 3 HOH B 52 652 194 HOH HOH . I 3 HOH B 53 653 41 HOH HOH . I 3 HOH B 54 654 272 HOH HOH . I 3 HOH B 55 655 385 HOH HOH . I 3 HOH B 56 656 305 HOH HOH . I 3 HOH B 57 657 62 HOH HOH . I 3 HOH B 58 658 366 HOH HOH . I 3 HOH B 59 659 364 HOH HOH . I 3 HOH B 60 660 174 HOH HOH . I 3 HOH B 61 661 428 HOH HOH . I 3 HOH B 62 662 434 HOH HOH . J 3 HOH D 1 601 282 HOH HOH . J 3 HOH D 2 602 61 HOH HOH . J 3 HOH D 3 603 160 HOH HOH . J 3 HOH D 4 604 33 HOH HOH . J 3 HOH D 5 605 5 HOH HOH . J 3 HOH D 6 606 223 HOH HOH . J 3 HOH D 7 607 70 HOH HOH . J 3 HOH D 8 608 309 HOH HOH . J 3 HOH D 9 609 200 HOH HOH . J 3 HOH D 10 610 16 HOH HOH . J 3 HOH D 11 611 202 HOH HOH . J 3 HOH D 12 612 8 HOH HOH . J 3 HOH D 13 613 40 HOH HOH . J 3 HOH D 14 614 81 HOH HOH . J 3 HOH D 15 615 224 HOH HOH . J 3 HOH D 16 616 348 HOH HOH . J 3 HOH D 17 617 68 HOH HOH . J 3 HOH D 18 618 149 HOH HOH . J 3 HOH D 19 619 163 HOH HOH . J 3 HOH D 20 620 182 HOH HOH . J 3 HOH D 21 621 150 HOH HOH . J 3 HOH D 22 622 232 HOH HOH . J 3 HOH D 23 623 28 HOH HOH . J 3 HOH D 24 624 55 HOH HOH . J 3 HOH D 25 625 210 HOH HOH . J 3 HOH D 26 626 3 HOH HOH . J 3 HOH D 27 627 50 HOH HOH . J 3 HOH D 28 628 212 HOH HOH . J 3 HOH D 29 629 211 HOH HOH . J 3 HOH D 30 630 116 HOH HOH . J 3 HOH D 31 631 184 HOH HOH . J 3 HOH D 32 632 161 HOH HOH . J 3 HOH D 33 633 256 HOH HOH . J 3 HOH D 34 634 424 HOH HOH . J 3 HOH D 35 635 397 HOH HOH . J 3 HOH D 36 636 387 HOH HOH . J 3 HOH D 37 637 100 HOH HOH . J 3 HOH D 38 638 218 HOH HOH . J 3 HOH D 39 639 121 HOH HOH . J 3 HOH D 40 640 320 HOH HOH . J 3 HOH D 41 641 221 HOH HOH . J 3 HOH D 42 642 346 HOH HOH . J 3 HOH D 43 643 245 HOH HOH . J 3 HOH D 44 644 197 HOH HOH . J 3 HOH D 45 645 126 HOH HOH . J 3 HOH D 46 646 215 HOH HOH . J 3 HOH D 47 647 284 HOH HOH . J 3 HOH D 48 648 338 HOH HOH . J 3 HOH D 49 649 292 HOH HOH . J 3 HOH D 50 650 374 HOH HOH . J 3 HOH D 51 651 427 HOH HOH . J 3 HOH D 52 652 401 HOH HOH . J 3 HOH D 53 653 295 HOH HOH . J 3 HOH D 54 654 336 HOH HOH . J 3 HOH D 55 655 380 HOH HOH . J 3 HOH D 56 656 353 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G6P . . . E 2 -26.154 -36.636 -34.975 1 55.98 ? C1 G6P 601 A 1 HETATM 2 C C2 G6P . . . E 2 -24.834 -36.512 -34.207 1 55.98 ? C2 G6P 601 A 1 HETATM 3 C C3 G6P . . . E 2 -24.818 -35.467 -33.083 1 55.98 ? C3 G6P 601 A 1 HETATM 4 C C4 G6P . . . E 2 -26.118 -35.391 -32.306 1 55.98 ? C4 G6P 601 A 1 HETATM 5 C C5 G6P . . . E 2 -27.129 -36.291 -32.991 1 55.98 ? C5 G6P 601 A 1 HETATM 6 C C6 G6P . . . E 2 -28.496 -36.296 -32.364 1 55.98 ? C6 G6P 601 A 1 HETATM 7 O O1 G6P . . . E 2 -26.558 -38.004 -35.015 1 55.98 ? O1 G6P 601 A 1 HETATM 8 O O2 G6P . . . E 2 -24.394 -37.8 -33.741 1 55.98 ? O2 G6P 601 A 1 HETATM 9 O O3 G6P . . . E 2 -24.562 -34.182 -33.654 1 55.98 ? O3 G6P 601 A 1 HETATM 10 O O4 G6P . . . E 2 -25.881 -35.82 -30.965 1 55.98 ? O4 G6P 601 A 1 HETATM 11 O O5 G6P . . . E 2 -27.19 -35.908 -34.346 1 55.98 ? O5 G6P 601 A 1 HETATM 12 O O6 G6P . . . E 2 -28.456 -37.425 -31.517 1 55.98 ? O6 G6P 601 A 1 HETATM 13 P P G6P . . . E 2 -29.699 -38.41 -31.409 1 55.98 ? P G6P 601 A 1 HETATM 14 O O1P G6P . . . E 2 -29.449 -39.035 -30.073 1 55.98 ? O1P G6P 601 A 1 HETATM 15 O O2P G6P . . . E 2 -30.898 -37.513 -31.486 1 55.98 ? O2P G6P 601 A 1 HETATM 16 O O3P G6P . . . E 2 -29.53 -39.338 -32.58 1 55.98 ? O3P G6P 601 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #