data_7E7I # _model_server_result.job_id XB6mn5W6vmvq83UsFyVN_g _model_server_result.datetime_utc '2024-11-04 22:46:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e7i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":2308}' # _entry.id 7E7I # _exptl.entry_id 7E7I _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 748.065 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1,2-Distearoyl-sn-glycerophosphoethanolamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7E7I _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E7I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 2 4 3 BMA BMA C1 O1 . O3 HO3 . sing 4 ? 2 5 3 BMA BMA C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 D 1 NAG A 2402 NAG 2 n B NAG 2 D 2 NAG A 2403 NAG 2 n B BMA 3 D 3 BMA A 2404 BMA 2 n B BMA 4 D 4 BMA A 2405 BMA 2 n B BMA 5 D 5 BMA A 2406 BMA 2 n C NAG 1 M 1 NAG A 2411 NAG 2 n C NAG 2 M 2 NAG A 2412 NAG 2 n C BMA 3 M 3 BMA A 2413 BMA 2 n C BMA 4 M 4 BMA A 2414 BMA 2 n C BMA 5 M 5 BMA A 2415 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 75 A CYS 54 1_555 A SG CYS 102 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 96 A CYS 75 1_555 A SG CYS 345 A CYS 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 A SG CYS 391 A CYS 370 1_555 A SG CYS 540 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 662 A CYS 641 1_555 A SG CYS 1511 A CYS 1490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? disulf ? disulf5 A SG CYS 1465 A CYS 1444 1_555 A SG CYS 1476 A CYS 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? disulf ? disulf6 A SG CYS 1509 A CYS 1488 1_555 A SG CYS 1523 A CYS 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A ND2 ASN 119 A ASN 98 1_555 D C1 NAG . A NAG 2301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.423 ? covale ? covale2 A ND2 ASN 436 A ASN 415 1_555 B C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale3 A ND2 ASN 465 A ASN 444 1_555 E C1 NAG . A NAG 2302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale4 A ND2 ASN 525 A ASN 504 1_555 F C1 NAG . A NAG 2303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale5 A ND2 ASN 1478 A ASN 1457 1_555 G C1 NAG . A NAG 2304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale6 A ND2 ASN 1490 A ASN 1469 1_555 H C1 NAG . A NAG 2305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale7 A ND2 ASN 1550 A ASN 1529 1_555 C C1 NAG . M NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? covale ? covale8 A ND2 ASN 1609 A ASN 1588 1_555 I C1 NAG . A NAG 2306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? covale ? covale9 A ND2 ASN 1683 A ASN 1662 1_555 J C1 NAG . A NAG 2307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale10 B O4 NAG . D NAG 1 1_555 B C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale11 B O4 NAG . D NAG 2 1_555 B C1 BMA . D BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale12 B O3 BMA . D BMA 3 1_555 B C1 BMA . D BMA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale13 B O6 BMA . D BMA 3 1_555 B C1 BMA . D BMA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale14 C O4 NAG . M NAG 1 1_555 C C1 NAG . M NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.419 ? covale ? covale15 C O4 NAG . M NAG 2 1_555 C C1 BMA . M BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? covale ? covale16 C O3 BMA . M BMA 3 1_555 C C1 BMA . M BMA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale17 C O6 BMA . M BMA 3 1_555 C C1 BMA . M BMA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? # _chem_comp.formula 'C41 H82 N O8 P' _chem_comp.formula_weight 748.065 _chem_comp.id 3PE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Distearoyl-sn-glycerophosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLETHANOLAMINE;1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE # _atom_sites.entry_id 7E7I _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NAG A 1 2301 2401 NAG NAG . E 3 NAG A 1 2302 2407 NAG NAG . F 3 NAG A 1 2303 2408 NAG NAG . G 3 NAG A 1 2304 2409 NAG NAG . H 3 NAG A 1 2305 2410 NAG NAG . I 3 NAG A 1 2306 2416 NAG NAG . J 3 NAG A 1 2307 2418 NAG NAG . K 4 3PE A 1 2308 1 3PE PEH . L 4 3PE A 1 2309 2 3PE PEH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 3PE . . . K 4 153.468 157.829 186.663 1 63.71 ? P 3PE 2308 A 1 HETATM 2 N N 3PE . . . K 4 152.085 158.928 182.987 1 63.71 ? N 3PE 2308 A 1 HETATM 3 O O11 3PE . . . K 4 154.515 156.869 185.9 1 63.71 ? O11 3PE 2308 A 1 HETATM 4 O O12 3PE . . . K 4 154.227 158.706 187.627 1 63.71 ? O12 3PE 2308 A 1 HETATM 5 O O13 3PE . . . K 4 153.01 158.744 185.424 1 63.71 ? O13 3PE 2308 A 1 HETATM 6 O O14 3PE . . . K 4 152.288 157.034 187.154 1 63.71 ? O14 3PE 2308 A 1 HETATM 7 C C11 3PE . . . K 4 151.717 159.329 185.344 1 63.71 ? C11 3PE 2308 A 1 HETATM 8 C C12 3PE . . . K 4 151.552 159.885 183.937 1 63.71 ? C12 3PE 2308 A 1 HETATM 9 C C1 3PE . . . K 4 154.726 155.505 186.257 1 63.71 ? C1 3PE 2308 A 1 HETATM 10 C C2 3PE . . . K 4 155.601 154.84 185.196 1 63.71 ? C2 3PE 2308 A 1 HETATM 11 C C3 3PE . . . K 4 155.23 153.366 185.072 1 63.71 ? C3 3PE 2308 A 1 HETATM 12 O O31 3PE . . . K 4 155.151 153.041 183.684 1 63.71 ? O31 3PE 2308 A 1 HETATM 13 O O32 3PE . . . K 4 155.521 150.765 183.866 1 63.71 ? O32 3PE 2308 A 1 HETATM 14 C C31 3PE . . . K 4 155.03 151.669 183.212 1 63.71 ? C31 3PE 2308 A 1 HETATM 15 C C32 3PE . . . K 4 154.304 151.39 181.915 1 63.71 ? C32 3PE 2308 A 1 HETATM 16 C C33 3PE . . . K 4 152.821 151.714 182.077 1 63.71 ? C33 3PE 2308 A 1 HETATM 17 C C34 3PE . . . K 4 152.283 152.471 180.871 1 63.71 ? C34 3PE 2308 A 1 HETATM 18 C C35 3PE . . . K 4 152.138 151.561 179.659 1 63.71 ? C35 3PE 2308 A 1 HETATM 19 C C36 3PE . . . K 4 151.489 152.303 178.499 1 63.71 ? C36 3PE 2308 A 1 HETATM 20 C C37 3PE . . . K 4 151.03 151.345 177.408 1 63.71 ? C37 3PE 2308 A 1 HETATM 21 C C38 3PE . . . K 4 150.143 152.065 176.399 1 63.71 ? C38 3PE 2308 A 1 HETATM 22 C C39 3PE . . . K 4 149.212 151.081 175.712 1 63.71 ? C39 3PE 2308 A 1 HETATM 23 C C3A 3PE . . . K 4 149.761 150.659 174.365 1 63.71 ? C3A 3PE 2308 A 1 HETATM 24 C C3B 3PE . . . K 4 149.758 151.847 173.419 1 63.71 ? C3B 3PE 2308 A 1 HETATM 25 C C3C 3PE . . . K 4 150.162 151.407 172.023 1 63.71 ? C3C 3PE 2308 A 1 HETATM 26 C C3D 3PE . . . K 4 149.321 150.222 171.577 1 63.71 ? C3D 3PE 2308 A 1 HETATM 27 C C3E 3PE . . . K 4 149.718 149.798 170.172 1 63.71 ? C3E 3PE 2308 A 1 HETATM 28 C C3F 3PE . . . K 4 148.672 148.863 169.588 1 63.71 ? C3F 3PE 2308 A 1 HETATM 29 C C3G 3PE . . . K 4 148.846 148.735 168.083 1 63.71 ? C3G 3PE 2308 A 1 HETATM 30 C C3H 3PE . . . K 4 147.684 147.958 167.481 1 63.71 ? C3H 3PE 2308 A 1 HETATM 31 C C3I 3PE . . . K 4 147.729 147.991 165.97 1 63.71 ? C3I 3PE 2308 A 1 HETATM 32 O O21 3PE . . . K 4 155.374 155.448 183.93 1 63.71 ? O21 3PE 2308 A 1 HETATM 33 O O22 3PE . . . K 4 157.645 155.785 183.861 1 63.71 ? O22 3PE 2308 A 1 HETATM 34 C C21 3PE . . . K 4 156.625 155.623 183.22 1 63.71 ? C21 3PE 2308 A 1 HETATM 35 C C22 3PE . . . K 4 156.666 155.552 181.714 1 63.71 ? C22 3PE 2308 A 1 HETATM 36 C C23 3PE . . . K 4 156.303 156.896 181.102 1 63.71 ? C23 3PE 2308 A 1 HETATM 37 C C24 3PE . . . K 4 156.315 156.798 179.582 1 63.71 ? C24 3PE 2308 A 1 HETATM 38 C C25 3PE . . . K 4 155.21 155.878 179.079 1 63.71 ? C25 3PE 2308 A 1 HETATM 39 C C26 3PE . . . K 4 155.495 155.395 177.663 1 63.71 ? C26 3PE 2308 A 1 HETATM 40 C C27 3PE . . . K 4 155.77 156.562 176.725 1 63.71 ? C27 3PE 2308 A 1 HETATM 41 C C28 3PE . . . K 4 154.51 157.371 176.446 1 63.71 ? C28 3PE 2308 A 1 HETATM 42 C C29 3PE . . . K 4 153.548 156.599 175.552 1 63.71 ? C29 3PE 2308 A 1 HETATM 43 C C2A 3PE . . . K 4 154.193 156.254 174.218 1 63.71 ? C2A 3PE 2308 A 1 HETATM 44 C C2B 3PE . . . K 4 153.133 155.811 173.22 1 63.71 ? C2B 3PE 2308 A 1 HETATM 45 C C2C 3PE . . . K 4 152.733 156.966 172.309 1 63.71 ? C2C 3PE 2308 A 1 HETATM 46 C C2D 3PE . . . K 4 151.348 156.75 171.72 1 63.71 ? C2D 3PE 2308 A 1 HETATM 47 C C2E 3PE . . . K 4 151.289 155.454 170.933 1 63.71 ? C2E 3PE 2308 A 1 HETATM 48 C C2F 3PE . . . K 4 152.217 155.52 169.731 1 63.71 ? C2F 3PE 2308 A 1 HETATM 49 C C2G 3PE . . . K 4 151.923 154.387 168.758 1 63.71 ? C2G 3PE 2308 A 1 HETATM 50 C C2H 3PE . . . K 4 150.43 154.267 168.483 1 63.71 ? C2H 3PE 2308 A 1 HETATM 51 C C2I 3PE . . . K 4 150.12 152.997 167.726 1 63.71 ? C2I 3PE 2308 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 51 #