data_7E7T # _model_server_result.job_id Bhy3ecup7za4fPwXSiOsDQ _model_server_result.datetime_utc '2025-06-24 22:22:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e7t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 7E7T # _exptl.entry_id 7E7T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 759.888 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[2-[4-[[(2R,3S,4R,5S,6S)-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]-1,2,3-triazol-1-yl]ethoxy]ethyl 2-[3,6-bis(diethylamino)-9H-xanthen-9-yl]benzoate' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.83 _cell.angle_gamma 90 _cell.entry_id 7E7T _cell.length_a 44.342 _cell.length_b 88.554 _cell.length_c 67.893 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E7T _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C41 H53 N5 O9' _chem_comp.formula_weight 759.888 _chem_comp.id R2F _chem_comp.mon_nstd_flag . _chem_comp.name '2-[2-[4-[[(2R,3S,4R,5S,6S)-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]-1,2,3-triazol-1-yl]ethoxy]ethyl 2-[3,6-bis(diethylamino)-9H-xanthen-9-yl]benzoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C21 R2F sing 277 n n C21 N1A R2F sing 278 n n C11 C12 R2F sing 279 n n C11 N1A R2F sing 280 n n N1A C5A R2F sing 281 n n C6A C5A R2F doub 282 n y C6A C1A R2F sing 283 n y C5A C4A R2F sing 284 n y O1B C1A R2F sing 285 n n O1B C4B R2F sing 286 n n C1A C2A R2F doub 287 n y C4A C3A R2F doub 288 n y C3C C4B R2F sing 289 n y C3C C4C R2F doub 290 n y C4B C1C R2F doub 291 n y C23 N1C R2F sing 292 n n C23 C24 R2F sing 293 n n C2A C3A R2F sing 294 n y C2A C2C R2F sing 295 n n N1C C4C R2F sing 296 n n N1C C13 R2F sing 297 n n C4C C5C R2F sing 298 n y C14 C13 R2F sing 299 n n C1C C2C R2F sing 300 n n C1C C6C R2F sing 301 n y C2C C2P R2F sing 302 n n C5C C6C R2F doub 303 n y O1 C2 R2F sing 304 n n O1 C7P R2F sing 305 n n C2P C3P R2F doub 306 n y C2P C1P R2F sing 307 n y C2 C3 R2F sing 308 n n O7P C7P R2F doub 309 n n C7P C1P R2F sing 310 n n C3P C4P R2F sing 311 n y C3 O4 R2F sing 312 n n C1P C6P R2F doub 313 n y N2T N1T R2F doub 314 n y N2T N3T R2F sing 315 n y C4P C5P R2F doub 316 n y C6 N3T R2F sing 317 n n C6 C5 R2F sing 318 n n N1T C5T R2F sing 319 n y C6P C5P R2F sing 320 n y N3T C4T R2F sing 321 n y O4 C5 R2F sing 322 n n C5T C4T R2F doub 323 n y C5T C1 R2F sing 324 n n C1 O1F R2F sing 325 n n O2F C2F R2F sing 326 n n O1F C1F R2F sing 327 n n C1F C2F R2F sing 328 n n C1F O5F R2F sing 329 n n C2F C3F R2F sing 330 n n O5F C5F R2F sing 331 n n C3F O3F R2F sing 332 n n C3F C4F R2F sing 333 n n C5F C4F R2F sing 334 n n C5F C6F R2F sing 335 n n C4F O4F R2F sing 336 n n C6P H1 R2F sing 337 n n C5P H2 R2F sing 338 n n C4P H3 R2F sing 339 n n C3P H4 R2F sing 340 n n C3A H5 R2F sing 341 n n C4A H6 R2F sing 342 n n C21 H7 R2F sing 343 n n C21 H8 R2F sing 344 n n C22 H9 R2F sing 345 n n C22 H10 R2F sing 346 n n C22 H11 R2F sing 347 n n C11 H12 R2F sing 348 n n C11 H13 R2F sing 349 n n C12 H14 R2F sing 350 n n C12 H15 R2F sing 351 n n C12 H16 R2F sing 352 n n C6A H17 R2F sing 353 n n C3C H18 R2F sing 354 n n C23 H19 R2F sing 355 n n C23 H20 R2F sing 356 n n C24 H21 R2F sing 357 n n C24 H22 R2F sing 358 n n C24 H23 R2F sing 359 n n C13 H24 R2F sing 360 n n C13 H25 R2F sing 361 n n C14 H26 R2F sing 362 n n C14 H27 R2F sing 363 n n C14 H28 R2F sing 364 n n C5C H29 R2F sing 365 n n C6C H30 R2F sing 366 n n C2 H31 R2F sing 367 n n C2 H32 R2F sing 368 n n C3 H33 R2F sing 369 n n C3 H34 R2F sing 370 n n C5 H35 R2F sing 371 n n C5 H36 R2F sing 372 n n C6 H37 R2F sing 373 n n C6 H38 R2F sing 374 n n C4T H39 R2F sing 375 n n C1 H40 R2F sing 376 n n C1 H41 R2F sing 377 n n C1F H42 R2F sing 378 n n C2F H43 R2F sing 379 n n O2F H44 R2F sing 380 n n C3F H45 R2F sing 381 n n O3F H46 R2F sing 382 n n C4F H47 R2F sing 383 n n O4F H48 R2F sing 384 n n C5F H49 R2F sing 385 n n C6F H50 R2F sing 386 n n C6F H51 R2F sing 387 n n C6F H52 R2F sing 388 n n C2C H53 R2F sing 389 n n # _atom_sites.entry_id 7E7T _atom_sites.fract_transf_matrix[1][1] 0.022552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001509 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011293 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R2F A 1 301 301 R2F R2F . D 2 R2F A 1 302 401 R2F R2F . E 2 R2F A 1 303 501 R2F R2F . F 2 R2F B 1 301 301 R2F R2F . G 2 R2F B 1 302 401 R2F R2F . H 2 R2F B 1 303 501 R2F R2F . I 3 HOH A 1 401 69 HOH HOH . I 3 HOH A 2 402 11 HOH HOH . I 3 HOH A 3 403 9 HOH HOH . I 3 HOH A 4 404 8 HOH HOH . I 3 HOH A 5 405 56 HOH HOH . I 3 HOH A 6 406 24 HOH HOH . I 3 HOH A 7 407 89 HOH HOH . I 3 HOH A 8 408 3 HOH HOH . I 3 HOH A 9 409 4 HOH HOH . I 3 HOH A 10 410 67 HOH HOH . I 3 HOH A 11 411 28 HOH HOH . I 3 HOH A 12 412 47 HOH HOH . I 3 HOH A 13 413 53 HOH HOH . I 3 HOH A 14 414 62 HOH HOH . I 3 HOH A 15 415 10 HOH HOH . I 3 HOH A 16 416 66 HOH HOH . I 3 HOH A 17 417 85 HOH HOH . I 3 HOH A 18 418 16 HOH HOH . I 3 HOH A 19 419 40 HOH HOH . I 3 HOH A 20 420 34 HOH HOH . I 3 HOH A 21 421 21 HOH HOH . I 3 HOH A 22 422 26 HOH HOH . I 3 HOH A 23 423 19 HOH HOH . I 3 HOH A 24 424 27 HOH HOH . I 3 HOH A 25 425 25 HOH HOH . I 3 HOH A 26 426 78 HOH HOH . I 3 HOH A 27 427 59 HOH HOH . I 3 HOH A 28 428 43 HOH HOH . I 3 HOH A 29 429 55 HOH HOH . I 3 HOH A 30 430 14 HOH HOH . I 3 HOH A 31 431 57 HOH HOH . I 3 HOH A 32 432 73 HOH HOH . I 3 HOH A 33 433 20 HOH HOH . I 3 HOH A 34 434 70 HOH HOH . I 3 HOH A 35 435 13 HOH HOH . I 3 HOH A 36 436 49 HOH HOH . I 3 HOH A 37 437 22 HOH HOH . I 3 HOH A 38 438 77 HOH HOH . I 3 HOH A 39 439 81 HOH HOH . I 3 HOH A 40 440 23 HOH HOH . I 3 HOH A 41 441 79 HOH HOH . I 3 HOH A 42 442 82 HOH HOH . I 3 HOH A 43 443 75 HOH HOH . I 3 HOH A 44 444 74 HOH HOH . I 3 HOH A 45 445 54 HOH HOH . I 3 HOH A 46 446 18 HOH HOH . I 3 HOH A 47 447 32 HOH HOH . J 3 HOH B 1 401 41 HOH HOH . J 3 HOH B 2 402 37 HOH HOH . J 3 HOH B 3 403 60 HOH HOH . J 3 HOH B 4 404 2 HOH HOH . J 3 HOH B 5 405 15 HOH HOH . J 3 HOH B 6 406 61 HOH HOH . J 3 HOH B 7 407 42 HOH HOH . J 3 HOH B 8 408 6 HOH HOH . J 3 HOH B 9 409 45 HOH HOH . J 3 HOH B 10 410 84 HOH HOH . J 3 HOH B 11 411 12 HOH HOH . J 3 HOH B 12 412 29 HOH HOH . J 3 HOH B 13 413 39 HOH HOH . J 3 HOH B 14 414 91 HOH HOH . J 3 HOH B 15 415 87 HOH HOH . J 3 HOH B 16 416 63 HOH HOH . J 3 HOH B 17 417 48 HOH HOH . J 3 HOH B 18 418 36 HOH HOH . J 3 HOH B 19 419 83 HOH HOH . J 3 HOH B 20 420 7 HOH HOH . J 3 HOH B 21 421 44 HOH HOH . J 3 HOH B 22 422 92 HOH HOH . J 3 HOH B 23 423 86 HOH HOH . J 3 HOH B 24 424 58 HOH HOH . J 3 HOH B 25 425 72 HOH HOH . J 3 HOH B 26 426 31 HOH HOH . J 3 HOH B 27 427 35 HOH HOH . J 3 HOH B 28 428 88 HOH HOH . J 3 HOH B 29 429 68 HOH HOH . J 3 HOH B 30 430 30 HOH HOH . J 3 HOH B 31 431 38 HOH HOH . J 3 HOH B 32 432 52 HOH HOH . J 3 HOH B 33 433 90 HOH HOH . J 3 HOH B 34 434 5 HOH HOH . J 3 HOH B 35 435 76 HOH HOH . J 3 HOH B 36 436 46 HOH HOH . J 3 HOH B 37 437 50 HOH HOH . J 3 HOH B 38 438 51 HOH HOH . J 3 HOH B 39 439 71 HOH HOH . J 3 HOH B 40 440 33 HOH HOH . J 3 HOH B 41 441 64 HOH HOH . J 3 HOH B 42 442 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O7P R2F . . . D 2 5.719 4.272 -26.894 1 103.3 ? O7P R2F 302 A 1 HETATM 2 C C7P R2F . . . D 2 6.278 3.982 -25.844 1 100.11 ? C7P R2F 302 A 1 HETATM 3 C C1P R2F . . . D 2 5.525 4.018 -24.532 1 102.02 ? C1P R2F 302 A 1 HETATM 4 C C6P R2F . . . D 2 5.989 4.834 -23.501 1 96.58 ? C6P R2F 302 A 1 HETATM 5 C C5P R2F . . . D 2 5.317 4.887 -22.282 1 97.37 ? C5P R2F 302 A 1 HETATM 6 C C4P R2F . . . D 2 4.173 4.123 -22.079 1 102.57 ? C4P R2F 302 A 1 HETATM 7 C C3P R2F . . . D 2 3.698 3.314 -23.104 1 105.34 ? C3P R2F 302 A 1 HETATM 8 C C2P R2F . . . D 2 4.361 3.27 -24.338 1 105.79 ? C2P R2F 302 A 1 HETATM 9 C C2C R2F . . . D 2 3.864 2.356 -25.413 1 108.73 ? C2C R2F 302 A 1 HETATM 10 C C2A R2F . . . D 2 4.361 1.074 -25.296 1 108.25 ? C2A R2F 302 A 1 HETATM 11 C C3A R2F . . . D 2 5.215 0.841 -24.231 1 106.17 ? C3A R2F 302 A 1 HETATM 12 C C4A R2F . . . D 2 5.745 -0.402 -24.034 1 107.08 ? C4A R2F 302 A 1 HETATM 13 C C5A R2F . . . D 2 5.437 -1.427 -24.919 1 107.18 ? C5A R2F 302 A 1 HETATM 14 N N1A R2F . . . D 2 6.027 -2.675 -24.669 1 99.89 ? N1A R2F 302 A 1 HETATM 15 C C21 R2F . . . D 2 5.411 -3.624 -23.739 1 98.45 ? C21 R2F 302 A 1 HETATM 16 C C22 R2F . . . D 2 5.612 -3.218 -22.291 1 95.5 ? C22 R2F 302 A 1 HETATM 17 C C11 R2F . . . D 2 7.271 -3.017 -25.354 1 98.54 ? C11 R2F 302 A 1 HETATM 18 C C12 R2F . . . D 2 8.248 -1.859 -25.392 1 95.83 ? C12 R2F 302 A 1 HETATM 19 C C6A R2F . . . D 2 4.575 -1.204 -26.004 1 107.83 ? C6A R2F 302 A 1 HETATM 20 C C1A R2F . . . D 2 4.03 0.069 -26.195 1 108.89 ? C1A R2F 302 A 1 HETATM 21 O O1B R2F . . . D 2 3.177 0.365 -27.232 1 111.24 ? O1B R2F 302 A 1 HETATM 22 C C4B R2F . . . D 2 2.665 1.641 -27.375 1 112.45 ? C4B R2F 302 A 1 HETATM 23 C C3C R2F . . . D 2 1.801 1.917 -28.437 1 115.08 ? C3C R2F 302 A 1 HETATM 24 C C4C R2F . . . D 2 1.27 3.196 -28.601 1 114.91 ? C4C R2F 302 A 1 HETATM 25 N N1C R2F . . . D 2 0.402 3.475 -29.673 1 116.87 ? N1C R2F 302 A 1 HETATM 26 C C23 R2F . . . D 2 0.825 3.191 -31.04 1 114.09 ? C23 R2F 302 A 1 HETATM 27 C C24 R2F . . . D 2 0.07 2.006 -31.601 1 115.78 ? C24 R2F 302 A 1 HETATM 28 C C13 R2F . . . D 2 -0.913 4.064 -29.432 1 114.44 ? C13 R2F 302 A 1 HETATM 29 C C14 R2F . . . D 2 -1.852 3.076 -28.769 1 114.1 ? C14 R2F 302 A 1 HETATM 30 C C5C R2F . . . D 2 1.609 4.204 -27.698 1 107.27 ? C5C R2F 302 A 1 HETATM 31 C C6C R2F . . . D 2 2.47 3.937 -26.636 1 109.24 ? C6C R2F 302 A 1 HETATM 32 C C1C R2F . . . D 2 3 2.658 -26.47 1 110.38 ? C1C R2F 302 A 1 HETATM 33 O O1 R2F . . . D 2 7.695 3.623 -25.884 1 93.9 ? O1 R2F 302 A 1 HETATM 34 C C2 R2F . . . D 2 8.155 2.283 -26.092 1 90.65 ? C2 R2F 302 A 1 HETATM 35 C C3 R2F . . . D 2 8.926 1.809 -24.86 1 83.75 ? C3 R2F 302 A 1 HETATM 36 O O4 R2F . . . D 2 10.347 1.935 -25.009 1 77.91 ? O4 R2F 302 A 1 HETATM 37 C C5 R2F . . . D 2 10.783 3.193 -25.534 1 75.68 ? C5 R2F 302 A 1 HETATM 38 C C6 R2F . . . D 2 11.362 4.094 -24.446 1 73.48 ? C6 R2F 302 A 1 HETATM 39 N N3T R2F . . . D 2 10.516 4.022 -23.253 1 71.22 ? N3T R2F 302 A 1 HETATM 40 N N2T R2F . . . D 2 9.458 4.935 -23.179 1 70.76 ? N2T R2F 302 A 1 HETATM 41 N N1T R2F . . . D 2 8.815 4.638 -21.963 1 67.01 ? N1T R2F 302 A 1 HETATM 42 C C5T R2F . . . D 2 9.463 3.594 -21.375 1 61.06 ? C5T R2F 302 A 1 HETATM 43 C C4T R2F . . . D 2 10.531 3.22 -22.188 1 64.18 ? C4T R2F 302 A 1 HETATM 44 C C1 R2F . . . D 2 9.147 2.93 -20.051 1 49.31 ? C1 R2F 302 A 1 HETATM 45 O O1F R2F . . . D 2 10.414 2.44 -19.613 1 45.92 ? O1F R2F 302 A 1 HETATM 46 C C1F R2F . . . D 2 10.627 2.241 -18.219 1 39.46 ? C1F R2F 302 A 1 HETATM 47 C C2F R2F . . . D 2 12.125 2.419 -17.988 1 39.7 ? C2F R2F 302 A 1 HETATM 48 O O2F R2F . . . D 2 12.807 1.903 -19.148 1 36.2 ? O2F R2F 302 A 1 HETATM 49 C C3F R2F . . . D 2 12.525 3.879 -17.779 1 37.77 ? C3F R2F 302 A 1 HETATM 50 O O3F R2F . . . D 2 13.928 3.982 -17.453 1 35.85 ? O3F R2F 302 A 1 HETATM 51 C C4F R2F . . . D 2 11.65 4.528 -16.711 1 36.93 ? C4F R2F 302 A 1 HETATM 52 O O4F R2F . . . D 2 11.796 3.867 -15.439 1 34.11 ? O4F R2F 302 A 1 HETATM 53 C C5F R2F . . . D 2 10.203 4.448 -17.17 1 38.85 ? C5F R2F 302 A 1 HETATM 54 O O5F R2F . . . D 2 9.812 3.088 -17.4 1 38.66 ? O5F R2F 302 A 1 HETATM 55 C C6F R2F . . . D 2 9.252 5.03 -16.129 1 36.28 ? C6F R2F 302 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 55 #