data_7E7T # _model_server_result.job_id RiaFxphyXrM-SgB6GeL4fA _model_server_result.datetime_utc '2025-06-24 22:37:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7e7t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 7E7T # _exptl.entry_id 7E7T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 759.888 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[2-[4-[[(2R,3S,4R,5S,6S)-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]-1,2,3-triazol-1-yl]ethoxy]ethyl 2-[3,6-bis(diethylamino)-9H-xanthen-9-yl]benzoate' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.83 _cell.angle_gamma 90 _cell.entry_id 7E7T _cell.length_a 44.342 _cell.length_b 88.554 _cell.length_c 67.893 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7E7T _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C41 H53 N5 O9' _chem_comp.formula_weight 759.888 _chem_comp.id R2F _chem_comp.mon_nstd_flag . _chem_comp.name '2-[2-[4-[[(2R,3S,4R,5S,6S)-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]-1,2,3-triazol-1-yl]ethoxy]ethyl 2-[3,6-bis(diethylamino)-9H-xanthen-9-yl]benzoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C21 R2F sing 277 n n C21 N1A R2F sing 278 n n C11 C12 R2F sing 279 n n C11 N1A R2F sing 280 n n N1A C5A R2F sing 281 n n C6A C5A R2F doub 282 n y C6A C1A R2F sing 283 n y C5A C4A R2F sing 284 n y O1B C1A R2F sing 285 n n O1B C4B R2F sing 286 n n C1A C2A R2F doub 287 n y C4A C3A R2F doub 288 n y C3C C4B R2F sing 289 n y C3C C4C R2F doub 290 n y C4B C1C R2F doub 291 n y C23 N1C R2F sing 292 n n C23 C24 R2F sing 293 n n C2A C3A R2F sing 294 n y C2A C2C R2F sing 295 n n N1C C4C R2F sing 296 n n N1C C13 R2F sing 297 n n C4C C5C R2F sing 298 n y C14 C13 R2F sing 299 n n C1C C2C R2F sing 300 n n C1C C6C R2F sing 301 n y C2C C2P R2F sing 302 n n C5C C6C R2F doub 303 n y O1 C2 R2F sing 304 n n O1 C7P R2F sing 305 n n C2P C3P R2F doub 306 n y C2P C1P R2F sing 307 n y C2 C3 R2F sing 308 n n O7P C7P R2F doub 309 n n C7P C1P R2F sing 310 n n C3P C4P R2F sing 311 n y C3 O4 R2F sing 312 n n C1P C6P R2F doub 313 n y N2T N1T R2F doub 314 n y N2T N3T R2F sing 315 n y C4P C5P R2F doub 316 n y C6 N3T R2F sing 317 n n C6 C5 R2F sing 318 n n N1T C5T R2F sing 319 n y C6P C5P R2F sing 320 n y N3T C4T R2F sing 321 n y O4 C5 R2F sing 322 n n C5T C4T R2F doub 323 n y C5T C1 R2F sing 324 n n C1 O1F R2F sing 325 n n O2F C2F R2F sing 326 n n O1F C1F R2F sing 327 n n C1F C2F R2F sing 328 n n C1F O5F R2F sing 329 n n C2F C3F R2F sing 330 n n O5F C5F R2F sing 331 n n C3F O3F R2F sing 332 n n C3F C4F R2F sing 333 n n C5F C4F R2F sing 334 n n C5F C6F R2F sing 335 n n C4F O4F R2F sing 336 n n C6P H1 R2F sing 337 n n C5P H2 R2F sing 338 n n C4P H3 R2F sing 339 n n C3P H4 R2F sing 340 n n C3A H5 R2F sing 341 n n C4A H6 R2F sing 342 n n C21 H7 R2F sing 343 n n C21 H8 R2F sing 344 n n C22 H9 R2F sing 345 n n C22 H10 R2F sing 346 n n C22 H11 R2F sing 347 n n C11 H12 R2F sing 348 n n C11 H13 R2F sing 349 n n C12 H14 R2F sing 350 n n C12 H15 R2F sing 351 n n C12 H16 R2F sing 352 n n C6A H17 R2F sing 353 n n C3C H18 R2F sing 354 n n C23 H19 R2F sing 355 n n C23 H20 R2F sing 356 n n C24 H21 R2F sing 357 n n C24 H22 R2F sing 358 n n C24 H23 R2F sing 359 n n C13 H24 R2F sing 360 n n C13 H25 R2F sing 361 n n C14 H26 R2F sing 362 n n C14 H27 R2F sing 363 n n C14 H28 R2F sing 364 n n C5C H29 R2F sing 365 n n C6C H30 R2F sing 366 n n C2 H31 R2F sing 367 n n C2 H32 R2F sing 368 n n C3 H33 R2F sing 369 n n C3 H34 R2F sing 370 n n C5 H35 R2F sing 371 n n C5 H36 R2F sing 372 n n C6 H37 R2F sing 373 n n C6 H38 R2F sing 374 n n C4T H39 R2F sing 375 n n C1 H40 R2F sing 376 n n C1 H41 R2F sing 377 n n C1F H42 R2F sing 378 n n C2F H43 R2F sing 379 n n O2F H44 R2F sing 380 n n C3F H45 R2F sing 381 n n O3F H46 R2F sing 382 n n C4F H47 R2F sing 383 n n O4F H48 R2F sing 384 n n C5F H49 R2F sing 385 n n C6F H50 R2F sing 386 n n C6F H51 R2F sing 387 n n C6F H52 R2F sing 388 n n C2C H53 R2F sing 389 n n # _atom_sites.entry_id 7E7T _atom_sites.fract_transf_matrix[1][1] 0.022552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001509 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011293 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R2F A 1 301 301 R2F R2F . D 2 R2F A 1 302 401 R2F R2F . E 2 R2F A 1 303 501 R2F R2F . F 2 R2F B 1 301 301 R2F R2F . G 2 R2F B 1 302 401 R2F R2F . H 2 R2F B 1 303 501 R2F R2F . I 3 HOH A 1 401 69 HOH HOH . I 3 HOH A 2 402 11 HOH HOH . I 3 HOH A 3 403 9 HOH HOH . I 3 HOH A 4 404 8 HOH HOH . I 3 HOH A 5 405 56 HOH HOH . I 3 HOH A 6 406 24 HOH HOH . I 3 HOH A 7 407 89 HOH HOH . I 3 HOH A 8 408 3 HOH HOH . I 3 HOH A 9 409 4 HOH HOH . I 3 HOH A 10 410 67 HOH HOH . I 3 HOH A 11 411 28 HOH HOH . I 3 HOH A 12 412 47 HOH HOH . I 3 HOH A 13 413 53 HOH HOH . I 3 HOH A 14 414 62 HOH HOH . I 3 HOH A 15 415 10 HOH HOH . I 3 HOH A 16 416 66 HOH HOH . I 3 HOH A 17 417 85 HOH HOH . I 3 HOH A 18 418 16 HOH HOH . I 3 HOH A 19 419 40 HOH HOH . I 3 HOH A 20 420 34 HOH HOH . I 3 HOH A 21 421 21 HOH HOH . I 3 HOH A 22 422 26 HOH HOH . I 3 HOH A 23 423 19 HOH HOH . I 3 HOH A 24 424 27 HOH HOH . I 3 HOH A 25 425 25 HOH HOH . I 3 HOH A 26 426 78 HOH HOH . I 3 HOH A 27 427 59 HOH HOH . I 3 HOH A 28 428 43 HOH HOH . I 3 HOH A 29 429 55 HOH HOH . I 3 HOH A 30 430 14 HOH HOH . I 3 HOH A 31 431 57 HOH HOH . I 3 HOH A 32 432 73 HOH HOH . I 3 HOH A 33 433 20 HOH HOH . I 3 HOH A 34 434 70 HOH HOH . I 3 HOH A 35 435 13 HOH HOH . I 3 HOH A 36 436 49 HOH HOH . I 3 HOH A 37 437 22 HOH HOH . I 3 HOH A 38 438 77 HOH HOH . I 3 HOH A 39 439 81 HOH HOH . I 3 HOH A 40 440 23 HOH HOH . I 3 HOH A 41 441 79 HOH HOH . I 3 HOH A 42 442 82 HOH HOH . I 3 HOH A 43 443 75 HOH HOH . I 3 HOH A 44 444 74 HOH HOH . I 3 HOH A 45 445 54 HOH HOH . I 3 HOH A 46 446 18 HOH HOH . I 3 HOH A 47 447 32 HOH HOH . J 3 HOH B 1 401 41 HOH HOH . J 3 HOH B 2 402 37 HOH HOH . J 3 HOH B 3 403 60 HOH HOH . J 3 HOH B 4 404 2 HOH HOH . J 3 HOH B 5 405 15 HOH HOH . J 3 HOH B 6 406 61 HOH HOH . J 3 HOH B 7 407 42 HOH HOH . J 3 HOH B 8 408 6 HOH HOH . J 3 HOH B 9 409 45 HOH HOH . J 3 HOH B 10 410 84 HOH HOH . J 3 HOH B 11 411 12 HOH HOH . J 3 HOH B 12 412 29 HOH HOH . J 3 HOH B 13 413 39 HOH HOH . J 3 HOH B 14 414 91 HOH HOH . J 3 HOH B 15 415 87 HOH HOH . J 3 HOH B 16 416 63 HOH HOH . J 3 HOH B 17 417 48 HOH HOH . J 3 HOH B 18 418 36 HOH HOH . J 3 HOH B 19 419 83 HOH HOH . J 3 HOH B 20 420 7 HOH HOH . J 3 HOH B 21 421 44 HOH HOH . J 3 HOH B 22 422 92 HOH HOH . J 3 HOH B 23 423 86 HOH HOH . J 3 HOH B 24 424 58 HOH HOH . J 3 HOH B 25 425 72 HOH HOH . J 3 HOH B 26 426 31 HOH HOH . J 3 HOH B 27 427 35 HOH HOH . J 3 HOH B 28 428 88 HOH HOH . J 3 HOH B 29 429 68 HOH HOH . J 3 HOH B 30 430 30 HOH HOH . J 3 HOH B 31 431 38 HOH HOH . J 3 HOH B 32 432 52 HOH HOH . J 3 HOH B 33 433 90 HOH HOH . J 3 HOH B 34 434 5 HOH HOH . J 3 HOH B 35 435 76 HOH HOH . J 3 HOH B 36 436 46 HOH HOH . J 3 HOH B 37 437 50 HOH HOH . J 3 HOH B 38 438 51 HOH HOH . J 3 HOH B 39 439 71 HOH HOH . J 3 HOH B 40 440 33 HOH HOH . J 3 HOH B 41 441 64 HOH HOH . J 3 HOH B 42 442 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O7P R2F . . . E 2 -7.411 -3.532 12.786 1 112.35 ? O7P R2F 303 A 1 HETATM 2 C C7P R2F . . . E 2 -7.877 -4.55 12.306 1 112.85 ? C7P R2F 303 A 1 HETATM 3 C C1P R2F . . . E 2 -9.351 -4.821 12.471 1 115.91 ? C1P R2F 303 A 1 HETATM 4 C C6P R2F . . . E 2 -10.163 -3.694 12.609 1 116.68 ? C6P R2F 303 A 1 HETATM 5 C C5P R2F . . . E 2 -11.54 -3.807 12.769 1 118.98 ? C5P R2F 303 A 1 HETATM 6 C C4P R2F . . . E 2 -12.124 -5.066 12.794 1 117.81 ? C4P R2F 303 A 1 HETATM 7 C C3P R2F . . . E 2 -11.321 -6.194 12.659 1 117.19 ? C3P R2F 303 A 1 HETATM 8 C C2P R2F . . . E 2 -9.934 -6.097 12.505 1 116.69 ? C2P R2F 303 A 1 HETATM 9 C C2C R2F . . . E 2 -9.187 -7.393 12.354 1 116.54 ? C2C R2F 303 A 1 HETATM 10 C C2A R2F . . . E 2 -8.765 -8.17 13.451 1 115.98 ? C2A R2F 303 A 1 HETATM 11 C C3A R2F . . . E 2 -8.984 -7.765 14.769 1 115.54 ? C3A R2F 303 A 1 HETATM 12 C C4A R2F . . . E 2 -8.54 -8.548 15.839 1 115.35 ? C4A R2F 303 A 1 HETATM 13 C C5A R2F . . . E 2 -7.869 -9.753 15.619 1 116.78 ? C5A R2F 303 A 1 HETATM 14 N N1A R2F . . . E 2 -7.435 -10.529 16.726 1 117.13 ? N1A R2F 303 A 1 HETATM 15 C C21 R2F . . . E 2 -6.774 -9.85 17.843 1 111.74 ? C21 R2F 303 A 1 HETATM 16 C C22 R2F . . . E 2 -5.464 -10.497 18.247 1 102.98 ? C22 R2F 303 A 1 HETATM 17 C C11 R2F . . . E 2 -7.694 -11.974 16.803 1 117.06 ? C11 R2F 303 A 1 HETATM 18 C C12 R2F . . . E 2 -6.705 -12.839 16.038 1 117.03 ? C12 R2F 303 A 1 HETATM 19 C C6A R2F . . . E 2 -7.656 -10.155 14.298 1 115.93 ? C6A R2F 303 A 1 HETATM 20 C C1A R2F . . . E 2 -8.095 -9.378 13.225 1 115.92 ? C1A R2F 303 A 1 HETATM 21 O O1B R2F . . . E 2 -7.859 -9.813 11.941 1 115.17 ? O1B R2F 303 A 1 HETATM 22 C C4B R2F . . . E 2 -8.276 -9.074 10.856 1 112.06 ? C4B R2F 303 A 1 HETATM 23 C C3C R2F . . . E 2 -8.033 -9.529 9.556 1 109.44 ? C3C R2F 303 A 1 HETATM 24 C C4C R2F . . . E 2 -8.446 -8.781 8.445 1 109.14 ? C4C R2F 303 A 1 HETATM 25 N N1C R2F . . . E 2 -8.241 -9.2 7.109 1 106.92 ? N1C R2F 303 A 1 HETATM 26 C C23 R2F . . . E 2 -9.304 -9.923 6.409 1 104.27 ? C23 R2F 303 A 1 HETATM 27 C C24 R2F . . . E 2 -9.757 -11.171 7.136 1 101.06 ? C24 R2F 303 A 1 HETATM 28 C C13 R2F . . . E 2 -7.035 -8.871 6.348 1 100.33 ? C13 R2F 303 A 1 HETATM 29 C C14 R2F . . . E 2 -5.782 -8.809 7.191 1 93.77 ? C14 R2F 303 A 1 HETATM 30 C C5C R2F . . . E 2 -9.121 -7.583 8.663 1 111.12 ? C5C R2F 303 A 1 HETATM 31 C C6C R2F . . . E 2 -9.364 -7.127 9.956 1 112.65 ? C6C R2F 303 A 1 HETATM 32 C C1C R2F . . . E 2 -8.945 -7.867 11.059 1 113.97 ? C1C R2F 303 A 1 HETATM 33 O O1 R2F . . . E 2 -6.963 -5.413 11.571 1 109.85 ? O1 R2F 303 A 1 HETATM 34 C C2 R2F . . . E 2 -5.601 -4.988 11.457 1 101.84 ? C2 R2F 303 A 1 HETATM 35 C C3 R2F . . . E 2 -4.863 -5.813 10.408 1 92.63 ? C3 R2F 303 A 1 HETATM 36 O O4 R2F . . . E 2 -4.295 -6.987 10.994 1 84.58 ? O4 R2F 303 A 1 HETATM 37 C C5 R2F . . . E 2 -3.832 -7.869 9.974 1 78.78 ? C5 R2F 303 A 1 HETATM 38 C C6 R2F . . . E 2 -2.666 -8.722 10.455 1 66.1 ? C6 R2F 303 A 1 HETATM 39 N N3T R2F . . . E 2 -1.579 -7.864 10.927 1 60.24 ? N3T R2F 303 A 1 HETATM 40 N N2T R2F . . . E 2 -0.747 -8.448 11.886 1 59.03 ? N2T R2F 303 A 1 HETATM 41 N N1T R2F . . . E 2 0.213 -7.474 12.186 1 52 ? N1T R2F 303 A 1 HETATM 42 C C5T R2F . . . E 2 -0.067 -6.382 11.434 1 51.2 ? C5T R2F 303 A 1 HETATM 43 C C4T R2F . . . E 2 -1.187 -6.626 10.642 1 57.25 ? C4T R2F 303 A 1 HETATM 44 C C1 R2F . . . E 2 0.722 -5.102 11.467 1 42.66 ? C1 R2F 303 A 1 HETATM 45 O O1F R2F . . . E 2 2.087 -5.464 11.311 1 40.26 ? O1F R2F 303 A 1 HETATM 46 C C1F R2F . . . E 2 2.971 -4.353 11.407 1 37.05 ? C1F R2F 303 A 1 HETATM 47 C C2F R2F . . . E 2 4.378 -4.914 11.317 1 36.99 ? C2F R2F 303 A 1 HETATM 48 O O2F R2F . . . E 2 4.569 -5.88 12.367 1 35.2 ? O2F R2F 303 A 1 HETATM 49 C C3F R2F . . . E 2 4.556 -5.53 9.936 1 35.83 ? C3F R2F 303 A 1 HETATM 50 O O3F R2F . . . E 2 5.873 -6.07 9.815 1 33.26 ? O3F R2F 303 A 1 HETATM 51 C C4F R2F . . . E 2 4.357 -4.439 8.882 1 37.28 ? C4F R2F 303 A 1 HETATM 52 O O4F R2F . . . E 2 5.331 -3.386 9.041 1 31.12 ? O4F R2F 303 A 1 HETATM 53 C C5F R2F . . . E 2 2.952 -3.874 9.015 1 36.82 ? C5F R2F 303 A 1 HETATM 54 O O5F R2F . . . E 2 2.747 -3.395 10.358 1 38.12 ? O5F R2F 303 A 1 HETATM 55 C C6F R2F . . . E 2 2.688 -2.764 8.003 1 35.69 ? C6F R2F 303 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 55 #