data_7EBH # _model_server_result.job_id ZJ6C0FBnD4zU3_PCsG9SCQ _model_server_result.datetime_utc '2025-02-16 22:45:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ebh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":506}' # _entry.id 7EBH # _exptl.entry_id 7EBH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 254.126 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-bromanyl-2-methyl-6-propyl-7H-pyrrolo[2,3-d]pyrimidine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7EBH _cell.length_a 109.347 _cell.length_b 109.347 _cell.length_c 84.167 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EBH _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall 'P 64' _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 54.6735 94.69728 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H12 Br N3' _chem_comp.formula_weight 254.126 _chem_comp.id J0F _chem_comp.mon_nstd_flag . _chem_comp.name 5-bromanyl-2-methyl-6-propyl-7H-pyrrolo[2,3-d]pyrimidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 J0F sing 188 n n C12 C11 J0F sing 189 n n N3 C4 J0F sing 190 n y N3 C1 J0F sing 191 n y C11 C1 J0F sing 192 n n N9 C4 J0F doub 193 n y N9 C8 J0F sing 194 n y C4 C5 J0F sing 195 n y C1 C2 J0F doub 196 n y C10 C8 J0F sing 197 n n C8 N7 J0F doub 198 n y C2 C5 J0F sing 199 n y C2 BR1 J0F sing 200 n n C5 C6 J0F doub 201 n y N7 C6 J0F sing 202 n y C6 H1 J0F sing 203 n n N3 H2 J0F sing 204 n n C10 H3 J0F sing 205 n n C10 H4 J0F sing 206 n n C10 H5 J0F sing 207 n n C11 H6 J0F sing 208 n n C11 H7 J0F sing 209 n n C12 H8 J0F sing 210 n n C12 H9 J0F sing 211 n n C13 H10 J0F sing 212 n n C13 H11 J0F sing 213 n n C13 H12 J0F sing 214 n n # _atom_sites.entry_id 7EBH _atom_sites.fract_transf_matrix[1][1] 0.009145 _atom_sites.fract_transf_matrix[1][2] 0.00528 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01056 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 501 1000 CL CL . C 3 ACT A 1 502 2000 ACT ACT . D 3 ACT A 1 503 2001 ACT ACT . E 4 DMS A 1 504 2100 DMS DMS . F 4 DMS A 1 505 2101 DMS DMS . G 5 J0F A 1 506 5000 J0F MOL . H 6 HOH A 1 601 71 HOH HOH . H 6 HOH A 2 602 61 HOH HOH . H 6 HOH A 3 603 69 HOH HOH . H 6 HOH A 4 604 67 HOH HOH . H 6 HOH A 5 605 51 HOH HOH . H 6 HOH A 6 606 53 HOH HOH . H 6 HOH A 7 607 26 HOH HOH . H 6 HOH A 8 608 31 HOH HOH . H 6 HOH A 9 609 13 HOH HOH . H 6 HOH A 10 610 7 HOH HOH . H 6 HOH A 11 611 49 HOH HOH . H 6 HOH A 12 612 37 HOH HOH . H 6 HOH A 13 613 74 HOH HOH . H 6 HOH A 14 614 3 HOH HOH . H 6 HOH A 15 615 32 HOH HOH . H 6 HOH A 16 616 35 HOH HOH . H 6 HOH A 17 617 43 HOH HOH . H 6 HOH A 18 618 21 HOH HOH . H 6 HOH A 19 619 4 HOH HOH . H 6 HOH A 20 620 39 HOH HOH . H 6 HOH A 21 621 19 HOH HOH . H 6 HOH A 22 622 48 HOH HOH . H 6 HOH A 23 623 55 HOH HOH . H 6 HOH A 24 624 16 HOH HOH . H 6 HOH A 25 625 66 HOH HOH . H 6 HOH A 26 626 12 HOH HOH . H 6 HOH A 27 627 5 HOH HOH . H 6 HOH A 28 628 20 HOH HOH . H 6 HOH A 29 629 28 HOH HOH . H 6 HOH A 30 630 10 HOH HOH . H 6 HOH A 31 631 8 HOH HOH . H 6 HOH A 32 632 40 HOH HOH . H 6 HOH A 33 633 33 HOH HOH . H 6 HOH A 34 634 9 HOH HOH . H 6 HOH A 35 635 36 HOH HOH . H 6 HOH A 36 636 23 HOH HOH . H 6 HOH A 37 637 42 HOH HOH . H 6 HOH A 38 638 6 HOH HOH . H 6 HOH A 39 639 27 HOH HOH . H 6 HOH A 40 640 18 HOH HOH . H 6 HOH A 41 641 52 HOH HOH . H 6 HOH A 42 642 57 HOH HOH . H 6 HOH A 43 643 17 HOH HOH . H 6 HOH A 44 644 58 HOH HOH . H 6 HOH A 45 645 14 HOH HOH . H 6 HOH A 46 646 1 HOH HOH . H 6 HOH A 47 647 11 HOH HOH . H 6 HOH A 48 648 63 HOH HOH . H 6 HOH A 49 649 15 HOH HOH . H 6 HOH A 50 650 64 HOH HOH . H 6 HOH A 51 651 87 HOH HOH . H 6 HOH A 52 652 60 HOH HOH . H 6 HOH A 53 653 88 HOH HOH . H 6 HOH A 54 654 76 HOH HOH . H 6 HOH A 55 655 54 HOH HOH . H 6 HOH A 56 656 72 HOH HOH . H 6 HOH A 57 657 50 HOH HOH . H 6 HOH A 58 658 91 HOH HOH . H 6 HOH A 59 659 34 HOH HOH . H 6 HOH A 60 660 24 HOH HOH . H 6 HOH A 61 661 59 HOH HOH . H 6 HOH A 62 662 62 HOH HOH . H 6 HOH A 63 663 81 HOH HOH . H 6 HOH A 64 664 78 HOH HOH . H 6 HOH A 65 665 83 HOH HOH . H 6 HOH A 66 666 25 HOH HOH . H 6 HOH A 67 667 38 HOH HOH . H 6 HOH A 68 668 82 HOH HOH . H 6 HOH A 69 669 65 HOH HOH . H 6 HOH A 70 670 45 HOH HOH . H 6 HOH A 71 671 30 HOH HOH . H 6 HOH A 72 672 29 HOH HOH . H 6 HOH A 73 673 75 HOH HOH . H 6 HOH A 74 674 85 HOH HOH . H 6 HOH A 75 675 22 HOH HOH . H 6 HOH A 76 676 89 HOH HOH . H 6 HOH A 77 677 79 HOH HOH . H 6 HOH A 78 678 56 HOH HOH . H 6 HOH A 79 679 80 HOH HOH . H 6 HOH A 80 680 90 HOH HOH . H 6 HOH A 81 681 70 HOH HOH . H 6 HOH A 82 682 47 HOH HOH . H 6 HOH A 83 683 77 HOH HOH . H 6 HOH A 84 684 84 HOH HOH . H 6 HOH A 85 685 41 HOH HOH . H 6 HOH A 86 686 86 HOH HOH . H 6 HOH A 87 687 44 HOH HOH . H 6 HOH A 88 688 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 J0F . . . G 5 34.373 37.808 61.516 1 33.89 ? C1 J0F 506 A 1 HETATM 2 C C2 J0F . . . G 5 34.395 37.248 62.77 1 35.95 ? C2 J0F 506 A 1 HETATM 3 C C4 J0F . . . G 5 33.119 35.937 61.493 1 38.13 ? C4 J0F 506 A 1 HETATM 4 C C5 J0F . . . G 5 33.61 36.074 62.781 1 36.05 ? C5 J0F 506 A 1 HETATM 5 C C6 J0F . . . G 5 33.225 35.082 63.673 1 39.37 ? C6 J0F 506 A 1 HETATM 6 N N3 J0F . . . G 5 33.585 36.978 60.747 1 35.88 ? N3 J0F 506 A 1 HETATM 7 C C8 J0F . . . G 5 32.008 34.067 61.96 1 38.62 ? C8 J0F 506 A 1 HETATM 8 C C10 J0F . . . G 5 31.12 32.939 61.529 1 40.87 ? C10 J0F 506 A 1 HETATM 9 C C11 J0F . . . G 5 35.048 39.028 60.979 1 35.48 ? C11 J0F 506 A 1 HETATM 10 C C12 J0F . . . G 5 34.096 40.133 60.537 1 35.71 ? C12 J0F 506 A 1 HETATM 11 C C13 J0F . . . G 5 34.858 41.222 59.8 1 38.36 ? C13 J0F 506 A 1 HETATM 12 N N7 J0F . . . G 5 32.42 34.077 63.248 1 41.18 ? N7 J0F 506 A 1 HETATM 13 N N9 J0F . . . G 5 32.322 34.974 61.016 1 39.93 ? N9 J0F 506 A 1 HETATM 14 BR BR1 J0F . . . G 5 35.324 37.947 64.245 1 40.99 ? BR1 J0F 506 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #